Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 -------->ATHB1                                                               --------->ATHB51                                                               --------->ATHB12                                                               <---------ICU4                                                              <---------ATHB51                                                              --------->ICU4                       --                                                           ------------>ATHB5                      <-                                                           --------->LBD16                         <-                                                          --------->LBD16                   <--------       --------->DAG2                                    --------->HSFB2a(2)              --------->WRKY38(1)     ---------->DOF2       ---------->DOF2         --------->ARR11(3)    --------->YAB1 <-------GAMYB ------RAV1(2)     <-----------HVH21   <----------DOF2   <---------HSFB2a(2)            ============= >ANAC46          <---------ZAT6  ---------->DOF2  <---------ARR11(3)   ----------->HVH21<---------MYB52(1)   ggtttgagaaaggtagcatagtgtcaccaaaatgctcaaagctttcccatagagttcttcccgaattattgtctatgacaactaaatttccgttgtctgt  22687700                <---------MYB52(1)       --------->ANAC58       <---------TGA1a       --------->TGA1a       --------->ANAC58                                 --------->YAB1       --------->ANAC46                                <---------YAB1       =============================bZIP_DOF      --------->ANAC58    --------->LBD16                               --------->ANAC58    <---------SPL7    <-------TEIL             --------->ANAC46  <---------LBD16  <---------At4g35610       --------->ANAC58            ------->GAMYB             <- ------->At4g35610 --------->At4g35610       --------->ANAC46         --------->MYB52(1)        ----- --------At4g35610--------->MYB52(2)         --------->ANAC58         ----------->RAV1(1)   <-------- --------ZAT2  <-----------HVH21           ----------->RAV1(1)   --------->AHL20(2)       --------->At4g35610 -ANAC46 ----------->HVH21                 --------->AtMYB61   --------->TOE2(3)          <---------At4g35610 ================MYC_MYB ---------->DOF2   <---------ALFIN1  <---------YAB1             <---------RAP2.6(2)   aagctccgcacgagacccgttagatgcaaaagtttctccaatggaccacacaacgctatgattttcattaaacaacagaagacttccattgctgctgata  22687800                                                          <---------LBD16                                                          --------->LBD16                                                         <---------LBD16                                                        <---------LBD16                                                       ------>MYB83                                                     ------->GAMYB                                                     <---------ALFIN1                                                     --------->AtMYB61                                                    <---------MYB55(2)                                               --------->ANAC58                                               <---------ALFIN1                                               --------->ANAC46                                               --------->ANAC58                                             <---------ALFIN1                                             ----------->RAV1(1)                             <-------                                            --------->MYB46(3)                               --------                                            <---------MYB55(2)                              <--------         <---------ZAT14                   --------->ANAC58      --------->YAB1             <--------         <---------At4g35610               --------->ANAC58--------->LBD16                  <--------         --------->ZAT14                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         ----------->RAV1(1)         --------->At4g35610  <-----------------AGL1--------->MYB46(3)            --------->GLK1(2) --------AHL20(2)  ----------->HVH21     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------GLK1(2) ------>GT1   --------->GLK1(2)         XXXXXXXXXXXXXXXXXXXX>MIR774              <---------ARR14(2) -YAB1--------->At4g35610  <----------DOF2------>NtERF2------>MYB46(1)           --------->ARR14(2)   gttaaatttgctgcagagtctgtaacaggcttttctctattggccacccacacaaccacccggggaatgatacccttgaaccagattccaacatactgat  22687900          <---------AHL20(2)                                 ---------->ID1        <---------YAB1                           <---------ZAT2               <----------DOF2     --------->ICU4                              --------->At4g35610      <---------ZAT18 --------AGL15                                   --------->ZAT2         <---------At4g35610 ------->AGL15                      --------->ANAC46        <-----------GT1<------ZmHOX2a(1)        < ---------AGL3                --------->YAB1     <---------At4g35610    --------->At4g35610         - ---------AGL2              xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    ----------->HVH21          ------- ---------AGL1       --------->GLK1(2)         <------ZmHOX2a(1)------>ZmHOX2a(1)      <---------MYB52(1)   tttgggagttattaaaactgaagaatcccaattcataaactccattagaggagctgagagtttttcctattgacagaggactttctctcgttatccctgc  22688000                                                   ------>ZmHOX2a(2)                                                 --------->ARR14(2)                                    --------->ANAC58              ------->MYC3             --------->ARR11(3)                  ----------->GT1   --------->ANAC58 ------>ZmHOX2a(1)                    <---------CCA1(2) ---------At4g35610             --------->ANAC58 <---------ARR11(3)                  <---------ARR11(3) -------->At4g35610    --------->ICU4  ---------->DOF2            <-------MYC3<---------ETT(2)      < -->AtLEC2  ---------->DOF2     --------->ANAC58 --------->ARR11(3)        <---------ANAC46<---------ARR11(3)   atagctgaaacttaaaaagatggtaattaagagcaaggaagcaaagaacatgatcctcttcttccccatgtgttattgtgtctacaagaactatatcttt  22688100                                                                                                  <--                                                                                                 ----                                                                --------------->AtSPL8           ----                                                          --------->O2                           ----                                        *TSS--------->ANAC58    <---------------AtSPL8  ----------->TBP             <---------MYB52(2)   --------->DAG2          <---------O2                 ------>MYB83     --------->AHL20(2)          ---------->DOF2   ---------->DOF2       <---------GLK1(2)   -------- ------ZmHOX2a(2)          ---------->DOF2  --------->ANAC58   <---------ANAC46        ------>MYB46(1)   ggatcaatttaagaaacaaacatgttaacaaaagaaaaagtaaaccaagaaaacaaagtcacgttgtgagtactatattctcaaacacctacaaatatgt  22688200                                      <---------YAB1                                   --------------->AGL15                                   <---------------AGL15                                  <-----------------AGL2                                  <-----------------AGL3                                  ===================================================================                                  <---------ANAC58                   <---------ANAC55(2)                                  <---------ANAC58                   --------->ANAC55(2)   ------>MYB46(1)                ----------------->AGL3        <---------ICU4   ------>MYB83                   ----------------->AGL2     --------->YAB1 --------->AtMYB61            <------------CBF              <---------YAB1 <---------MYB59        --------->GLK1(2)                  --------->AHL20(1)               <-------- -------WRKY18(1)     --------->HSFC1(2)                   --------->AHL20(2)        --------->DAG2 ----->WRKY38(1)      --------->HSFB2a(1)                  <---------AHL20(1)       ---------->DOF2 ----->WRKY12         <---------HSFB2a(1)                 --------->YAB1        --------->ANAC58 ----->WRKY45         <---------HSFC1(2)              <---------AHL20(2)        --------->ANAC46    < ->ARR11(3)   <---------YAB1 <---------AtLEC2         --------->AHL20(2)        --------->ANAC58   <-   tgaccaaaccagacttatgttcgaaaattctgcattgcttaatatagtaatagaaaataaatataatacttatgtaatggccacgaaaaagtccaacgtt  22688300     <---------ARR14(2)     --------->GLK1(2)                                   <------ZmHOX2a(1)     --------->ARR14(2)                             --------->ATHB12 ----------------->AG                               --------->YAB1 --------->ANAC46                                   <--------ATHB1 ==================MADS_MADS                       <---------ATHB12                     --------->WOX13(1) -TOE1(2)                                  <---------ANAC58  <---------ARR11(3)       --------->WRKY18(1) -----------GT1               <---------YAB1       <---------YAB1           --------->WOX13(1)  <---- ----------GT1         ----------->RAV1(1) <---------ANAC58  --------->ARR11(3)     ----------->GT1   tttacccaatctgtttctcccatagcaacattgtcattttcatgttcttgtcaatgataggaatatatactcttgcatcaatcgaatggtcaatctgact  22688400                                           ------>MYB83                                    <---------WOX13(1)                                  --------->ATHB12                            --------->ANAC58                            --------->ANAC58                            --------->ANAC55(2)            --------->TOE2(3)                            <---------ANAC55(2)    ---------->DOF2                     <---------ATHB12   ----------------->AGL1          --------->AHL20(2)                   --------->WOX13(1) <---------WRKY18(1)<-------TEIL   <---------AHL20(2)     ------       ----------->RAV1(1)  --------->ANAC46--------->GLK1(2)       --------->AHL20(2)         <-----      <---------ETT(1)   <---------ATHB12  ------>MYB46(1)<XXXXXXXXXXXXXXXXXXXXMIR849         -------      --------->ANAC46 --------->WOX13(1)<---------MYB59--------->CCA1(2)--------->WOX13(1)   <------ ------DOF2   <-----------GT1    --------->ICU4  ----------->HVH21  <---------AHL20(2)        <------   ttaagaacccgacatttaacccaatcaatcacgcattgattgacctaatctgtgaaagatacatcaatgtttaattaatcagacatttcttagacaataa  22688500                                                                          ------->TEIL                                                                   ------->GAMYB                                                                  --------->ANAC58        --------->ICU4                                          --------->MYB52(1)     <---------ZAT6                                             ------>MYB83  ------>ZmHOX2a(1)     --------->ICU4                                             ------>MYB46(1) --->YAB1                                                     <---------MYB55(2) ----ICU4                         ------->TEIL                --------->MYB46(3)  <---------ANAC58 -->ICU4<---------YAB1         --------->ANAC58              --------->ANAC58--------->TOE1(3) ---ATHB12                     --------->ANAC58              --------->ANAC58--------->TOE2(3) <----- ---ATHB51                 --------->YAB1         <-----------GT1 --------->ANAC58<---------ANAC58 --   tgaagtagtgatgagtgatgactcgtctaaaataagcacctctaaacaattttcaccagttggacccaacgaaatgaatccttagcttgaaacactgtgt  22688600  Previous    Next  AGI:  At1g61480.1    Description:  S-locus protein kinase, putative. similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61440.1); similar to S-locus lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G61420.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17786.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17785.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21247.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290) Range:  from: 22684981    to: 22688140    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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