Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                          <------NtERF2                                                            <-                         <---------LBD16                                                       <-----                         --------->LBD16                     <----------DOF2                   <-----                        <---------ANAC46               --------->AGP1                         -------                        <---------LBD16           <-----------HVH21                        <---------AHL20(2)                       <---------LBD16         <---------ANAC58                            --------->AHL20(2)             --------->ANAC58                  <---------ANAC58                           --------->AHL20(2)    <---------ANAC46   <-----------------------TaNAC69(2)    <---------DAG2            --------->AHL20(2) -DOF2       --------->ANAC58                  <---------ANAC46  --------->ANAC55(2)   --------->ATHB51   ggattagtgtgtatgaagcaagagagccggggaaaaaaaaaacactgtgtcttgtcagaactactttacttattttccaaaaatatgcattatttaataa  22681000                                             --------->ANAC58                                             <---------ANAC55(2)                                             --------->ANAC55(2)                                             --------->ANAC55(1)                                             --------->ANAC46                                             --------->ANAC58          <-------TEIL                      <-------TEIL         --------->CCA1(2)                 --------->CCA1(2)                            <---------HSFB2a(2)     <---------WOX13(1)                    --------->ARR14(1)                           --------->HSFB2a(2)  <---------YAB1                          <---------ARR14(2)                       --------->MYB59 -------->ANAC55(2)                       --------->ARR14(2)                 <---------ANAC46 ---------ANAC55(2)              ----------------->AGL1                      <---------ANAC58 ------TEIL                 <---------ICU4<---------GLK1(2)                  <---------ANAC58 ----AHL20(2)      --------->ANAC58       --------->ARR11(1)                <---------STY1(2) ----ICU4<<<<<<<<<<<<<<<<<LFY  <-----------GT1                              --------->STY1(2)  ------ -->AHL20(2)       --------->ANAC58  <-----------HVH21 <---------YAB1 ------>ZmHOX2a(1) <-----------RAV1(2)   atacatgatagatacattggcacgaagaagtcattaccgtatcagatacgcaacgttttcattgttccagtccttactagcttgttaggcccagaagaac  22681100                                                <---------HSFB2a(2)                                                --------->HSFB2a(2)                                            --------->ARR14(2)                             --------->ARR11(3) ------>ZmHOX2a(1)               --------->ZAT14              <---------ARR14(2)             <-----------HVH21  <------               <---------ZAT14 <-----------------AGL1                    --------->DAG2       <------    <<<<<<<<<<GT-3b    <---------YAB1      --------->GLK1(1)            ---------->DOF2       <------ ->TEIL        --------->At4g35610         <---------GLK1(1)   <---------ZAT18       <---------DEAR3(1)   ctatatttttcttgaactgcagactatgaattatctcgtttaggcatttcctcgaacacttgcagtgcataacaaaaagtcagagcttcggtgatgtctt  22681200                                     <---------ATHB12                                    ------>MYB46(1)                              --------->SPL7                                                     <---                           <---------ANAC58                                                      <---   --------->TOE2(3)       <---------ANAC58                                            --------->WRKY18(1)   --------->TOE1(3)      --------------->AtSPL3                                     ------->GAMYB <---------ARR11(3)       --------------->AtSPL8     <-----------HVH21       <--------ATHB1      <--- --------->ARR11(3)    --------->ATHB12             ------->GAMYB     <---------At4g35610 --------->ICU4 ---ANAC46           <---------WOX13(1)            <------------AtMYB77 --------->RAP2.6(2)  <------- ---ANAC58         --------->ATHB12 ------>MYB83 --------->MYB52(1)   --------->At4g35610 <---------YAB1 ---ANAC58       <---------ATHB12   -------->P <----------DOF2  ---------->DOF2     --------->MYB46(3)   gaagaccttaatgaccccaatcgattgattcgtactccaaccatatgggcttaactgtcactatccaaaagcagccgaataattcaacagtcaagattga  22681300                                                                 <---------HSFB2a(2)                                                                 --------->LBD16                                                                <---------LBD16                                                                --------->HSFB2a(2)                                  <-----------HVH21             <---------ANAC46                                 <---------ANAC46               <---------HSFB2a(2)                          <---------ANAC46                     <---------LBD16                          <---------ANAC58                    --------->MYB52(1)                          <---------ANAC58        --------->LBD16--------->HSFB2a(2)                        <---------WRKY18(1)   -------->P   --------->HSFC1(2)                      <---------WOX13(1)    --------->AtMYB61 ------>MYB46(1)                     <---------ANAC46      <---------MYB52(2) ------>MYB83                        <--  <-----------HVH21  <---------ANAC58 --------->ANAC58     <---------HSFC1(2)                     <-- ------ANAC46        <---------ANAC58 --------->ANAC58     --------->HSFB2a(1)             ---------- ------ANAC58        <---------AtLEC2 --------->ANAC46     <---------HSFB2a(1)  ---------->DOF2   <-- ------ANAC58     <--------P     <---------bZIP60(1)      ------->TEIL        *TSS    <----------DOF2 --WOX13(1)----------->HVH21     --------->bZIP60(1)     <---------ARR14(2)--------->AHL20(2)     <--   cttgtgtcagtgtatgacaggttgcttgacttgtgtcgtcaagccactaacccagagaagaaccttccgggaagacttaaaataaagtcttttgtcaatt  22681400             ----------->GT1        --------->HSFB2a(2)        <---------HSFB2a(2)       <---------LBD16      <---------LBD16 -------ANAC58                              <---------AHL20(2)                             <--------- -------ANAC55(1)                           --------->AHL20(2)        ---------->DOF2  xxxxxxxxxxxxxx -->CBF<---------ANAC46    <---------AHL20(2)--------->AHL20(2)    ----------->GT1     <xxxxxxxxxxxxx -------ANAC58             --------->AHL20(2)<---------AHL20(2)    --------->YAB1     xxxxxxxxxxxxxxx -------ANAC46           <----------DOF2<------ZmHOX2a(1) <---------ANAC46      --------->HSFB2a(2)   tcgtgtatttcgggatggaaaattagactttaatttgtaataggaatttaattcggtttagcgttgaaatcgtaaaccgcttcggaaacaaggcttttga  22681500                                                                                           <---------                                    --------->ANAC58                                    <<<<<<<<CAMTA3                                    --------->ANAC58    ----------->GT1                ------->MYC3                                 --------->WRKY18(1)    <---------ZAT6                 <-------MYC3                            <---------ARR14(2)        <---------ANAC46                --------->ANAC58                         --------->MYB59            --------->ZAT14                   --------->ANAC58                    --------->AHL20(2)     --------->AHL20(2)                         --------->ANAC46 -DOF2       --------->YAB1 --------->ARR14(2)      <---------ZAT14                 <---------ALFIN1 xx>smallRNA(i)     <---------AHL20(2)     <---------AHL20(2)                      --------->MYB46(3) xxxsmallRNA(i)    <---------AHL20(2)     --------->AHL20(2)                     <---------ARR14(2) x>smallRNA(i)     --------->AHL20(2)     <---------AHL20(2)                     --------->ARR14(2)   gttttgagagagaaattagaatttaattcggttcgggcaaggaatttaattcggtttagtgttaaaaattgaaaaccgcttcggaaccacgcgttttttt  22681600                                                                     ------->TEIL                                                                  --------->ANAC58                                                                  --------->ANAC46                                                             <---------WRKY38(1)                                                         --------->DAG2       ----------->GT1                                                        ---------->DOF2<----------DOF2         <----- -DOF2             <------------CBF             <------ZmHOX2a(1) --------->ANAC58  --------->AHL20(2)   gtttttgaattttaagagaaaaattgaaaactcgtgtttaacaagaattaggagtcaaaaaagtcaacacgaacttttgatggaaaaaaaatgaaaactt  22681700                                                                                   <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                                  <---------AHL20(1)                                                                               ------>MYB46(1)                                                                               ------>MYB83                                                                            --------->MYB46(3)                                                                           -------->P                                                                           ------>MYB46(1)                                                                           ------>MYB83                                                                           --------->ANAC58                                                                           --------->ANAC58                 <------ZmHOX2a(1)                                       --------->DEAR3(1)               <---------TOE2(3)                               <---------AHL20(2) --------->AHL20(2)       ------>ZmHOX2a(1)     <------MYB46(1)                   --------->AHL20(2) --------->AHL20(1)      --------->TOE2(3)      <------MYB83                      --------->YAB1------->GAMYB     ----------->GT1         <---------DEAR3(2)             --------->YAB1------>NtERF2   --------->ARR14(2)       <---------DEAR3(1)       <---------GLK1(2)--------->ANAC46   <---------ARR14(2)  --------->ZAT14             --------->AHL20(2) --------->ANAC58  --------->ATHB12 -----DOF2 --------->YAB1   <---------DREB2C(2)   ----------->TBP     --------->ANAC58 <-------TEIL   tatagtatcctaaaaataaggaaactgaagtcggtgtcttaatctaatccctataaattctctaataatataacgccaaccaaataaaattcatttgtta  22681800                                                     --------->At5g28300                                                    ----------->GT1                                                   <---------DEAR3(1)          <---------ZAT2                                           <---------HSFB2a(2)                --------->ANAC58          <-----------HVH21           <---------ANAC58                        --------->ANAC58         <----------DOF2              <---------ANAC58                    --------->ANAC46   <----------DOF2         <---------GLK1(2)      --------->At4g35610     --------->ANAC58   <---------DAG2     --------->MYB52(1)   --------->HSFB2a(2)            --------->ANAC58   tctcactttctctttcagataaacaaacagtttcttagtttcgttcgagatgagcggtgaagtttggagatggaacaagcaagcagagatgaattcgata  22681900  Previous    Next  AGI:  At1g61460.1    Description:  S-locus protein kinase, putative. similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61480.1); similar to S-locus lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G61420.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21247.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); Range:  from: 22677863    to: 22681378    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g61470.1    Description:  CCR4-NOT transcription complex protein, putative. similar to CCR4-NOT transcription complex protein, putative [Arabidopsis thaliana] (TAIR:AT1G27820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78317.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Ribonuclease CAF1; (InterPro:IPR006941) Range:  from: 22681850    to: 22682686    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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