Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->ARR11(3)                           --------------->AtSPL8                    <---------ARR11(3)                           --------------->AtSPL3        >>>>>>>>>GATA-1                         <-----------GT1----------->GT1  >>>>>>>>>GATA-3               --------->YAB1       <---------REM1(2)    >>>>>>>>>GATA-2               <---------ICU4   <--------------OsCBT     --------->ARR14(2) --------------->AGL15               -------->ATHB1  >>>>>>>>>SPL4             <---------ARR14(2) <---------------AGL15               --------->ATHB12>>>>>>>>>SPL1             >>>>>>>>>GATA-4   <---------ANAC58   <---------MYB46(3)   <-----------GT1--------->ANAC46<---------ZAT18     <---------ANAC58 <-------- ------>HVH21 <---------ATHB12 >>>>>>>>>SPL5<---------AHL20(2)  --------->LBD16             <-------- ---At4g35610 <---------YAB1   --------->SPL7       --------->MYB52(2)  <----------DOF2     --------- -->At4g35610 --------->ICU4 --------->LBD16--------->AHL20(2)<---------LBD16     --------->ALFIN1---   gacattggtttctgaaatcattgtttttacccgtacaatacacggtttaaatgttagtggattcaccggaagagctttcttgaagtgggagactacgtga  22676500                    ------>MYB46(1)                    ------>MYB83                                        --------->ZAT6    <-----------HVH21                                                ----------->HVH21 -ANAC55(2)       --------->DEAR3(1)                             <---------ANAC58 -ANAC46          --------->MYB46(3)             ---------->DOF2 <---------ANAC58 >ANAC55(2)    <-----------GT1         --------->YAB1            <---------ANAC46                 <-- ------>ARR11(3) --------->ANAC46     <---------YAB1        <---------ICU4  ---------->DOF2      ----   aatctcgttcaggcatttcaccgaacacttgtaatgcattatcagaacgctcaaagctcccataatgtcgtttgacactaatgccccgattacacaattg  22676600                                                               --------->ATHB12                                                              <---------YAB1                                                            <---------WRKY38(1)   <---------At4g35610      ---------->DOF2                                    ------->GAMYB            --------->At4g35610  <-------TEIL                                          --------->MYB46(3)    <-----------HVH21     < -------------AtSPL8                         --------->At4g35610     <---------ANAC58              <- ------>DOF2        --------->O2             <---------At4g35610     <---------ANAC58              --   aaagtacatatagccattcccaacgtgaaactgtttttgtccaaaatagctgacttcaacagtcaacattggtgtgccagtgtcaccagagagaagaaga  22676700                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                             <------ZmHOX2a(2)                                                                      ------>MYB46(1)<---------AHL20(2)                                                                      ------>MYB83   --------->AHL20(2)                                                       <-----------ARR10    --------->AGP1                                                       --------->GLK1(2)    <---------ARR14(2)                                                       ------->TEIL <---------MYB59  --------->AHL20(1)                                                       <---------ARR14(2)   <---------AGP1   --------                                                       --------->ARR14(2)   <---------ARR11(3)    <--                                                      <---------CCA1(2)     --------->ARR14(2)    <--                                                ------>MYB46(1)    --------->MYB46(3)<---------AHL20(1)          <-----------GT1                       ------>MYB83     ------>MYB83--------->CCA1(2)    <-- --------->YAB1                               <---------MYB59    ------>MYB46(1)    --------->AHL20(2) ------ZmHOX2a(2)        ------->TEIL        --------->ANAC58  <---------MYB59------>ZmHOX2a(2)   <-- --------ARR11(3)     --------->ANAC58       --------->ANAC46 --------->DEAR3(2)--------->LBD16  <--- ------->ARR11(3)     --------->ANAC58       --------->ANAC58------->TEIL ----------->ARR10 ---------   cgatcatcaattctaccatttcgaacgcacatattgaaagattacaaacccaactcgaatctgaaccgaaccaaactagatccgaaataaattaaaaagt  22676800                              <---------ARR14(2)                              --------->ARR14(2)                             --------->GLK1(1)         --------->ANAC58                             <---------GLK1(1)         --------->ANAC46                           --------->LBD16             --------->ANAC58                         ------>ZmHOX2a(2)           <---------DOF5.7(2)    <---------ARR11(3)                        --------->CCA1(2)           <---------WRKY38(1)     --------->ARR11(3) <-------TEIL           <------ZmHOX2a(2)       --------->MYB59             <-----------ARR10 ->DAG2                 --------->ARR14(1)  <---------ARR14(2)         --------->At5g28300 -------MYB46(3)       <---------ARR11(3)   --------->ARR14(2)        ----------->GT1 ----MYB46(1)          --------->ARR14(2)<-----------------AGL2       --------->LBD16 -------DEAR3(2)       <---------ARR14(2)<-----------------AG ---------->DOF2    <-----------ARR10 ----MYB83             --------->ARR11(1)<-----------------AGL1      <------NtERF2 ------DEAR3(1)    ---------->DOF2 <------------CBF <---------WRKY12<---------LBD16            ------ ->DOF2 <-----------GT1--------->ARR11(3)----------------->AGL1---------->DOF2  <---------CCA1(2) ---   cggttcgtatttacaaatattgaaagatccgaaatccgattgggccgattttggtaaacgcccataaaggcccggtaaaatcttatcttcccctaactca  22676900                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                         ============                                                                                 <---------ARR14(2)                                                                               --------->LBD16                                                                              <---------ANAC46  =====                                                                             <---------LBD16 <-------                                 --------->ANAC58                            --------->At4g35610=====    <------------CBF             --------->ANAC58                            <---------At4g35610<----  --------->ARR11(3)     ---------->DOF2                                <---------GLK1(1)============ --->YAB1               *TSS--------->At4g35610                         --------->GLK1(1)<------ZmHOX2a(1) ------>MYB52(1)      ---------->DOF2                              ----------->GT1  --------->ALFIN1   taacgatattgattttgaattttgaaaagaagcggaagcaagagcgagcgagagagagagagagacagagagtgatttctgcggagatggaggattcagg  22677000               ------>ZmHOX2a(2)               ====================HOX2a_HOX2a              <---------GLK1(1)              <------ZmHOX2a(2)              =====================HOX2a_HOX2a              --------->GLK1(1)             <---------AGP1             <-----------ARR10             <---------ARR11(3)             --------->AGP1             <---------ARR14(2)             --------->ARR14(2)             --------->ARR11(3)            --------->At4g35610            <---------CCA1(2)        <-----------HVH21  --------->GLK1(2)         <------ZmHOX2a(1) =====================HOX2a_HOX2a ====================HOX2a_HOX2a                                           <------MYB46(1) ----RAV1(2)<---------At4g35610                                            <------MYB83      -------- =====================HOX2a_HOX2a              <-----------GT1           <---------WOX13(1) --------- --ZmHOX2a(1)--------->ARR14(3)   <---------ANAC58               --------->ZAT14            <-------- ====================HOX2a_HOX2a  <---------ANAC58               <---------ZAT14        <----------DOF2   agcgattctatgtcagatctccattttcaaggacatgcttgatcaggtttcactattcttcatcttcttcactggattggtatctctcgtctttagctta  22677100                                                         <---------ANAC46                                                         --------->TGA1a                                                         <---------O2                                                         --------->O2                                                         <---------TGA1a                                                      ----------->HVH21                                                      ----------->TGA1       ----------->HVH21                --------->ANAC58 <---------bZIP60(1)           <---------ZAT14   <---------ZAT2                 --------->GLK1(1)   --------->ALFIN1              <---------ANAC58   --------->ZAT2              --------->LBD16       <-----------HVH21              <---------ANAC46   --------->At4g35610    --------->WOX13(1)        <---------At4g35610        ------>ZmHOX2a(2)   <---------At4g35610   <---------WRKY12           --------->At4g35610       <------ZmHOX2a(2) ->TOE2(3)              --------->WRKY18(1)       <-----------RAV1(2)        --------->ARR14(2) >At4g35610            <-----------HVH21--------->ANAC58 --------->bZIP60(1) <---------ARR14(2) -At4g35610------>ZmHOX2a(2) <---------LBD16 <---------ATHB12     <------ZmHOX2a(2) <---------ANAC58-   atctgagctgtgatcgaatgaaacaggtcaatcgggaaatcgaagcaaacattcaggtgacgcgagagatcgaatcacagatcggagcgtgttctgagat  22677200                                                                                   <-----------RAV1(2)                                                                                ----------->HVH21                                                                                <---------MYB52(1)                                           <---------ANAC58                ==========================                                       --------->KAN4(2)                   ------>ZmHOX2a(2)                           <---------At4g35610 <---------ANAC58           <---------GLK1(1)                           --------->At4g35610 <---------ANAC58          <---------ARR11(3)                           --------->ZAT2  <---------ANAC58              --------->ARR11(3)                      ----------->RAV1(2) --------->MYB52(2)       <---------MYB46(3)                    --------->ARR14(2)------>ZmHOX2a(2)          <---------At4g35610                    <---------ARR14(2)--------->HSFB2a(1)        --------->At4g35610                 --------->ANAC58     <---------HSFB2a(1)     <------ZmHOX2a(2)<-------GAMYB                 --------->ANAC58   --------->ARR11(3)       <---------ARR11(3)<-----------HVH21 ------>TEIL     --------->ANAC46   <---------ARR11(3)    <---------HSFB2a(2) --------->ANAC46   tgaatcttctctgtctctcaaggaacctgagcttactagatcgttccttgcttctcaattcgagatcagcggtttgatctccgttacaggtgtctaaatt  22677300                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       --------->ANAC58                    <-----------GT1                           <---------At4g35610      --------->ARR14(2)                                   ---------->DOF2      <---------ARR14(2)          <---------YAB1        ------>ZmHOX2a(1)     <------ZmHOX2a(1)    --------->YAB1   <---------TOE2(3)  --------->At4g35610 --------->LBD16 --------->YAB1--------->ICU4          --------->TOE1(3)                           -- ===========HOX2a_HOX2a  <-------TEIL --------->ZAT6   --------->TOE2(3) <---------GLK1(2)     <-----   ttccgaaggatttgttcaatattcacattcgtaattttgatcactatggttttatttccttaaaagctgattcaagaaactctctgaagctattggagga  22677400  Previous    Next  AGI:  At1g61450.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61415.1); similar to Os05g0275600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055074.1) Range:  from: 22676924    to: 22677658    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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