Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ---------->DOF2                                                                                 <---------MYB52(1)                                                                              <---------LBD16                                                   --------->LBD16         --------->GLK1(1)                               <----------DOF2    --------->ANAC46         <---------GLK1(1)       --                          ---------->DOF2         --------->LBD16         <---------ARR11(3)       --     --------->YAB1      <---------WRKY38(1)     <---------HSFB2a(2)      --------->ARR11(3)       -- ---ZmHOX2a(1)           <---------WRKY12        --------->HSFB2a(2)    <---------TOE2(3)       ----- ----TOE2(3)             <---------WRKY45  --------->ARR11(3)          --------->YAB1 ----------->HVH21 >ALFIN1                --------->WRKY18(1)<---------ARR11(3)    --------->YAB1 --------->LBD16 <----   gaaggaagcatagtatcaccaagatggtcaaagctttgccatagagttcttcccgaaaaattgtctatgacaataagatttccggtgtctgaaagctctg  22666900                                               --------->ICU4                                       <                                          --------->ANAC58                                     ------                                          --------->ANAC46                                    -------        <---------MYB52(1)                --------->ANAC58                                    <------ ----------->HVH21                   --------->ANAC58                                         <------ ------->ANAC58                      --------->ANAC58                                       --------- ------->ANAC58            <---------ALFIN1------->GAMYB                            <---------YAB1  < ------->ANAC46           <---------ZAT14 --------->bZIP60(2) --------->MYB52(1)   <---------ANAC46 < ---->ZAT14        <---------ARR11(3)--------->AtLEC2     <---------AHL20(2)      <---------At4g35610 -----ZAT14        --------->ARR11(3)--------->ANAC46    --------->AHL20(2)   <-----------RAV1(1) <--   cacgagacccgttagaaacaagagcttctccactggaccatgcaacgccatgtttgccattaaataacagaagacttccattgttgctgatagcgagatt  22667000                                                  <---------LBD16                                                  --------->LBD16                                                 <---------LBD16                                                <---------LBD16                                               ------>MYB83                                             <---------ALFIN1                                             ------->GAMYB                                             --------->AtMYB61                                            <---------MYB55(2)                                       --------->ANAC58                                       --------->ANAC46                                       --------->ANAC58                                       <---------ALFIN1      --------->GLK1(2)              ----------->RAV1(1) --------->LBD16                     <---------ALFIN1 ---------ANAC58                    --------->MYB46(3) --->CCA1(2)                        <---------MYB55(2)                                 <---------GLK1(2) -->ARR14(2)                       --------->ANAC58      --------->YAB1              <---------YAB1 ---ARR14(2)                       --------->ANAC58--------->LBD16                  <---------------- ---GLK1(2)                       ------>NtERF2------>MYB46(1)               <---------ETT(1)       < -->ARR10  ----------->HVH21     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->GLK1(2)      ---- ---------ANAC46                XXXXXXXXXXXXXXXXXXXX>MIR774              <---------ARR14(2)--------->HSFB2a(2) ---------ANAC58      <-----------------AGL1--------->MYB46(3)           --------->ARR14(2)<---------HSFB2a(2) -------At5g28300  <----------DOF2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------GLK1(2)<---------LBD16   tgccgtggaatctgtaacaggcttttctctattggccacccacacaaccacccggggaataatacccttgaaccagattccgacatactgattctgggag  22667100   <---------YAB1                                                                      --------->ZAT2  <---------AHL20(2)                                 ---------->ID1                    --------->ZAT14  --------->AHL20(2)                     <---------ZAT2                                <---------ZAT14 --------->YAB1                          --------->At4g35610          <----------DOF2  <---------ZAT2 -AGL2      <---------ARR14(2)           <---------At4g35610       <------ZmHOX2a(1)  --------->AtLEC2 ---------YAB1                           --------->ZAT2        ---------->DOF2 <---------MYB52(1)<--- ----->ICU4 --------->ARR14(2)         <------ZmHOX2a(1)------>ZmHOX2a(1) <----------DOF2        <<<<   ttattaaaattgaagaaccccagttcataaaaaccattagaggagctgagagtttgtcctattggcaaaggactttctttcgttatccctgcagagctag  22667200                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                        <-                               ---------->DOF2            --------->ARR14(2)               <---------TOE2(3)    ---------->DOF2         --------->ANAC58          --------->LBD16                <----------DOF2 ------ARR11(3) --------->CCA1(2)        <---------ARR14(2)                       --------->ARR11(3) <<<ZML2 --------->GLK1(2)  --------->ANAC58<---------ALFIN1       <-----------GT1<---------ARR11(3)   aacttataaagaagctagataagagcaaataagcaaagaacacgatccacttcttccccatatttgttatttctctccaaaaactatcttttttagatta  22667300                    --------->ANAC58                    ----------->GT1                                             <---------TGA1a                    --------->ANAC58                                            <---------ANAC46                --------->ANAC58                                                <---------ANAC58                ------------------------>ANAC81                                 <---------ANAC58                --------->ANAC58                                             ----------->HVH21          <----------ID1                                              <---------LBD16      ---------->DOF2                                              --------->At4g35610   *TSS--------->DAG2                       <----------DOF2        <---------At4g35610     --------->YAB1 ---------DOF2---------->DOF2               ==============================================bZIP_DOF   gctttacataaagcgagaaagcaagaaaaaaaaaaaaaaaaactctctttgcacattttttgttttgtcaactcagggactgacttgtgagaataataca  22667400                          <----------DOF2                         <---------ICU4                      --------->YAB1                   --------->YAB1                     --------->MYB52(2)                  --------->AHL20(2)        --------->ARR11(3)                        --------->ANAC58                 --------->AHL20(2)    --------->HSFB2a(2)                            --------->ANAC58             <---------MYB52(1)  <---------TOE2(3)  <---------MYB52(1)          ---------->DOF2     -     --------->ARR11(3)--------->GLK1(2)   --------->YAB1               ---------->DOF2             -    --------->YAB1<---------AHL20(2)   <---------HSFB2a(2)  <---------YAB1   <-----------HVH21   ----   gaacaaaaatcatgcgttatttaataatctttactaatgttccaaaaatcatgcgttatttgataatagagaacaaaagtgtcaaagcacgaataagtcc  22667500            --------->ANAC55(2)            --------->ANAC55(1)            --------->ANAC58            <---------ANAC55(2)            --------->ANAC58            --------->ANAC46           <-------TEIL          --------->CCA1(2)          --------->ARR14(1)         <---------ARR14(2)         --------->ARR14(2)         --------->ARR11(1)         <---------GLK1(2)       ----------->ARR10      --------->YAB1     <---------ATHB12   --------->WOX13(1) ---------------->AG                                                  ---------->DOF2           ----- ---------------->AGL1                                      <----------DOF2 <----------DOF2     <---- -->ZmHOX2a(1)        <---------YAB1            ---------->DOF2     <---------YAB1       <---------At5g28300   ttacccaatcagatacgcaacgttgtcattgttcaatgctatcaagaacaaaaagaagaagactttggttatcaaagactttagaataagttactgcaaa  22667600                        --------->ATHB12                        <---------ICU4                        <--------HAHB4                        --------->YAB1                             <---------ZAT18                       <---------ATHB12     ---------->DOF2      --------->At4g35610            --------->AtLEC2<---------AHL20(2)--------->DAG2 --------->MYB52(1)                    <- ---->ARR14(2)       --------->WOX13(1) --------->ANAC46     <-----------GT1                   ------ -----ARR14(2) ---------->DOF2  --------->AHL20(2)      ---------->DOF2                     ---------   ttttcttctattccattcaaagacaatcatttacttaaatacacaaaaaaggtgttcagaaagtaactgctcactaaacaaataacaacgtgaatgagtg  22667700                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           <-------TEIL                                                                                          --------->ARR14(1)                                                                                          --------->CCA1(2)                                                                                         <---------ARR14(2)                                                                                         <---------GLK1(2)                                                                                         --------->ARR14(2)                                                                                         --------->ARR11(1)                                                                  --------->ANAC58     ----------->ARR10                                                            <---------WOX13(1)        --------->YAB1                                                           <---------GLK1(2)         <---------ATHB12                                  --------->YAB1          --------->ATHB12      ----------------->AG ---------ARF1 ------>ZmHOX2a(1)  <--------ATHB1        <---------WOX13(1)      ----------------->AGL1 --->ALFIN1    --------->ICU4    <---------ATHB12    <---------YAB1          ------>ZmHOX2a(1) >ATHB12       <---------YAB1    <---------ATHB51 <-------TEIL    --------->ANAC58 --------->WOX13(1)   ggagacaattccaagtccttattagctctgcatcaataatagaaacaatgcatacatgatagattggcacgaagaagtccttacccaatcagatacgcaa  22667800  Previous    Next  AGI:  At1g61420.1    Description:  S-locus lectin protein kinase family protein. similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61480.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61500.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45332.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17789.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21247.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290) Range:  from: 22664125    to: 22667303    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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