Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->LBD16                                    <---------ANAC46       <----------DOF2                                    <---------ANAC58       <---------DAG2      ------>ZmHOX2a(2)                                    <---------ANAC58--------->ZAT2            <------ZmHOX2a(2)                               ----------->RAV1(2)  <---------ZAT2    --------->HSFB2a(2)            <-----------GT1  <-----------GT1        --------->At4g35610      <---------ARR11(3)        <---------MYB52(1) <-----------GT1          <---------At4g35610      --------->ARR11(3)   ctcaaactctgttttttcatcgcatagtttttcaccttgcgcgagacatctctcagcttcacttttcatcttctcaaacgatctcgtcttgttcacaact  22662700                                                                    ----------->HVH21                                                     ------>ZmHOX2a(2)                                                   --------->ARR11(3)                        <-------                                              --------->ZAT6      <---------At4g35610       ---------                                            --------->MYB52(1)    --------->At4g35610       ---------                                           ------>ZmHOX2a(1)      ----------->RAV1(2)       ---------                                           =================HOX2a_HOX2a                   <---------ALFIN1             <---------YAB1            <---------ARR11(3)       --------->YAB1         --------->AtMYB61         <---------DAG2         --------->GLK1(2)  <---------ARR11(3)               <---------ALFIN1   tcttcacttagccttatgttagcctccataagaaaatccaaaatcctaacagtgatcttcttgctatcatctgatggtttacatttccacctccactcaa  22662800                                                                                 <---------At4g35610                                         ------>ZmHOX2a(2)                       --------->ZAT2                                        <------ZmHOX2a(2)                        --------->At4g35610 --ATHB12                              --------->ARR11(3)                   --------->MYB59 >ANAC58                               <---------ARR11(3)             <---------MYB59               < >ANAC58                        <---------ANAC46                     <-----------------AGL1         < >ANAC46      --------->HSFB2a(2) <---------MYB52(1)           --------->TOE2(3) <---------ZAT2<-----   gtttagtcccttccttctcaaacgtccaagagagccgtttagatccctcaatagcatcggagaaaccatagaccgaattaggctgctgaaaccctaagta  22662900                                  --------->PCF5              ------>ZmHOX2a(1)                                  <---------TCP20            <---------ALFIN1        --------->At4g35610       --------->PCF2       <---------ALFIN1        <---------ZAT2          <------MYB83          <---------MYB52(1)    <------NtERF2               <------MYB46(1)      <---------At4g35610  <---------DEAR3(1)     <-------TEIL                --------->At4g35610 ---------ANAC58        --------->CCA1(2)           --------->ANAC46<-----------HVH21            ---- ---------ANAC58       --------->ARR14(2)   --------->At4g35610    --------->ANAC46         <------ZmHOX2a(1) ----ICU4              <---------ARR14(2)   <---------At4g35610  ------>ZmHOX2a(1)     ----------->HVH21   ttgctcggcgagctctaaatactcagatacaggctggtcccattgctgctctctccgctacctcctcctccgtcgcattgcaagtccaagtgaaggagcc  22663000                                                                    --------->GLK1(1)                                                                <------NtERF2                                                               --------->LBD16                                                              --------->DEAR3(1)                                                              <---------ANAC46                                                             <------NtERF2                                                             --------->RAP2.3(1)                                                             --------->ATERF1(1)                                                             <---------LBD16                                                            <---------ERF1                                                            <---------RAP2.6(1)                                                            <---------ATERF1(1)                                                            <---------RAP2.3(1)                                                            <---------RRTF1(1)                                                           <---------DEAR3(1)                                                           <---------RAP2.3(2)                                                           --------->DEAR3(1)                                                          --------->ATERF1(1)           --------->GLK1(1)                             <---------RAP2.3(1)          --------->ARR11(3)                            ------>ZmHOX2a(2)          <---------ARR11(3)                            <---------DEAR3(1)     <---------ANAC46                                 <---------ARR14(2)                     <-------  ----------->TGA1                         <---------TOE2(3)------>NtERF2                    <-------  ----------->HVH21                      --------->WRKY12<---------ATERF1(1)                 <------- <-----------HVH21                       ----------->HVH21--------->RAP2.3(1)        ------->MYC3 ----->MYB52(1)                        <----------DOF2--------->ARR14(2)             <-------MYC3   atcggtgacggagatatcgaaacgagagtgataccatgttcctttgacgaaaattggatcggcgccggagatttcaagatggagacatgtgtgtttcgtt  22663100                                                                                <---------HSFC1(2)                                                                                --------->HSFB2a(1)                                                                                <---------HSFB2a(1)                                                                                --------->KAN4(1)                                                                                <----------TaMYB80                                                                                <---------KAN4(1)                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                 <------------CBF                                                  <---------ANAC58       <---------ARR11(3)   -------                                        <---------ARR14(2)     --------->ARR11(3)<---------ARR14(2)                                        --------->ARR14(2)     <---------AHL20(1)--------->ARR14(2)                                     <------NtERF2<---------ANAC46       --------->ARR11(3)   -------                       ------>ZmHOX2a(2)<---------MYB52(1)     --------->AHL20(1)--------->KAN4(2) --ANAC46 <---------ATHB12*TSS     <---------DEAR3(1)    ----------------->AGL3<---------KAN4(2) --ANAC58 --------->MYB46(3)<------ZmHOX2a(2)     <---------ANAC58   ---------->DOF2       <--------- --ANAC58>>>>>>>>>>>>>>>>>LFY ---------->DOF2    <-------TEIL --------->YAB1   ---------->TaMYB80   ttctccgattcaaccattgtttcgatctcgatcaaagtcgccgatattcggttcgtgtttccaaaaatattgaaagatcggaatattcgatttgcgacga  22663200                      <----------DOF2                   <---------MYB52(1)                  --------->At5g28300                 <---------ANAC46                                                    <---------YAB1                 ----------->GT1                                              <---------TOE2(3)                 <---------ANAC58                                      <---------ZAT18        ------------>CBF       ---------->DOF2                         --------->ZAT18     <---------ARR11(3)   ----------->GT1                             <---------ANAC58 -->ANAC58       <---------ANAC58                         <-----------ARR10  --------->MYB52(1) -->ANAC58      <---------DEAR3(1)    <-----------HVH21  <---------CCA1(2) <----------DOF2 -ID1--------->ARR11(3)   <---------TOE2(3)        ---------->DOF2    <---------ANAC58          *TSS-   aacacaaggtctcaatgggccgtgatttaagttaaaagcccatcaggcccagtaaaagcttatcttcccatagcgcgcttaacgattttgattttgaatt  22663300                                  --------->At4g35610                                  <---------ZAT2                                  <---------At4g35610                                <-----------RAV1(2)                    <---------ARR14(2)                    --------->ARR14(2)   --------->GLK1(2)           --------->ANAC58  --------->ARR14(2)           --------->ANAC58  <---------ARR14(2)     --------->ARR14(2)   <---------ANAC58         <------ZmHOX2a(1)  <------ZmHOX2a(1)  <-----------HVH21   <------ZmHOX2a(1)  <-----------GT1 --------->DOF2    <------ZmHOX2a(1) <-------TEIL  <---------CCA1(2)     <---------ANAC58   tgaaaagaagaggaagcaagaggaaatggaggattcaggtgcgattctatgtcaaatctccattttcaaggacatgcttgatcaggtttcactattcttc  22663400                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                              ----------->HVH21                --------->ANAC58 -----                                          <---------At4g35610            --------->GLK1(1)   --------                                          --------->At4g35610         --------->LBD16       <--------              <------MYB46(1)             <---------ZAT2         --------->WOX13(1)        <---------At4g35610              <------MYB83      --------->TOE2(3)               <---------WRKY12           --------->At4g35610            <---------WOX13(1) <---------At4g35610             --------->WRKY18(1)         --------->ANAC46    <---------ZAT14            --------->At4g35610------>ZmHOX2a(2) <---------LBD16 <---------ATHB12    --------->ZAT14        <----------DOF2--------->ZAT2      <-----------HVH21--------->ANAC58 -----   atcttcttcactggattggtatctctcgtctttagcttaatctgagctgtgatcgaatgaaacaggtcaatcgggaaatcgaagcaaacattcaggtcac  22663500     <------ZmHOX2a(2) ---->ANAC55(2) ---->O2 -----O2                               <---------ARR14(2)         <---------At4g35610 ---->TGA1a                            --------->ARR14(2)         --------->ZAT2 -----TGA1a                           <---------ARR14(2)          --------->At4g35610            <--- -----ANAC55(2)                       --------->ARR14(2)     <---------At4g35610                 ---- ---->ANAC46                          <---------GLK1(2)      --------->ZAT2           <---------ANAC58 ---->ANAC58      ------>ZmHOX2a(2)--------->ANAC58          --------->At4g35610      <---------ANAC58 --->HVH21       <------ZmHOX2a(2) <---------ANAC55(2)      --------->GLK1(2)     <---------ANAC58 ---HVH21       <---------ARR14(2) --------->ANAC55(2) ---------->DOF2            <---------ANAC58 ---->ANAC58    --------->ARR14(2) --------->ANAC58 <-----------HVH21            --------->MYB52(2) <   gcgagagatcgaatcacagatcggaaattgttctgagacggaatcggctctgtctgtcaaagaagctgagcttactaaatcgttccttgcttctcagttc  22663600  Previous    Next  AGI:  At1g61410.1    Description:  tolA protein-related. similar to XRCC4 (Arabidopsis thaliana homolog of human DNA ligase IV-binding protein XRCC4) [Arabidopsis thaliana] (TAIR:AT3G23100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71310.1); contains InterPro domain DNA double-strand break repair and VJ recombination XRCC4, C-terminal; (InterPro:IPR014751) Range:  from: 22662217    to: 22663126    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g61415.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61450.1); similar to hypothetical protein OsI_018577 [Oryza sativa (indica cultivar-group)] (GB:EAY97344.1); similar to Os05g0275600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055074.1) Range:  from: 22663296    to: 22664632    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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