Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <<<<<<<GRF7                                                                                     ------>ZmHOX2a(1)   <---------AHL20(2)                                                                ----------->HVH21 <---------AHL20(2)               ------->TEIL                                   <-----------GT1 -------->AHL20(2)  --------->ANAC58                                        <---------ANAC46 ->ANAC58           --------->ANAC58              <----------DOF2   <-----------GT1----------->RAV1(2) ->ANAC58   ---------->DOF2--------->YAB1   <------MYB46(1)--------->YAB1   <---------ANAC58    ----- >DOF2 ----------->GT1    <---------ATHB12  <------MYB83  <-------TEIL      <---------ANAC58    <----   aattttatattgaaaaaagaagaagcaaatcatatgtatttgtatttggtttcttttatattcatcaaattttcagtttcgtttttcctgacacctattt  22620600                                                     --------->AHL20(2)                                                 --------->ATHB12                                           <---------At4g35610                                          ------->TEIL                                          --------->ARR14(2)                --------->ALFIN1          <---------ARR14(2)                <-----------RAV1(1)      <---------CCA1(2)                                      -----   --------->ANAC58                  <---------At4g35610                              --------->ANAC58   --------->ANAC58                  <---------ZAT2  <---------AHL20(2)               --------->ANAC58   <---------ANAC55(2)               --------->At4g35610                          --------->ANAC58 ---->AHL20(2) ------->MYC3          --------->ZAT2<---------------AGL15          --------->ANAC58 -----AHL20(2) <-------MYC3   <---------ARR11(3)<---------YAB1                    --------->AtLEC2   aaatcaagtaaactacatgtgtcgctctacaatatgttcagctgtatctgatgatttatatggaaaacgttttatatagcaaacatgcaaacaatttcta  22620700                    ---------->DOF2             --------->AHL20(1)             <---------AHL20(1)                       --------->AHL20(2)             <---------AHL20(2)                   <---------AHL20(2)            --------->AHL20(2)                  --------->ANAC55(2)            <---------AHL20(2)                  <---------ANAC55(2)        --------->AHL20(2)                    --------->CCA1(2)        <---------AHL20(2)                   <---------ARR11(3)          <---------AHL20(1)        --------->AHL20(1)                   --------->ARR11(3)          --------->AHL20(1)        <---------AHL20(1)             <---------AHL20(2)                --------->ARR11(3)       --------->AHL20(2)         <---------AHL20(2)  <---------AHL20(2) <---------ARR11(3)       <---------AHL20(2)        --------->AHL20(2)  --------->ICU4 --------->AHL20(2)             <-    --------->AHL20(2)--------->ANAC58--------->AHL20(1)           --------->AHL20(2)           <----   <---------AHL20(2) ----------->GT1 --------->AHL20(2)  <---------HSFB2a(2)               ---------   --------->AHL20(2) --------->ANAC58<---------AHL20(2)  --------->HSFB2a(2)              ---------- ----->DOF2 --------->YAB1     --------->TOE2(3)----------->GT1--------->AHL20(2) ----------->RAV1(1)   aagaaataaataaattatattggaaagaaataacataaaatttaatagatatgtaattttttagaaaaaataaaaaatattcgtcaacataagtaaagtt  22620800                                                                                    <----------DOF2                                                                                    <---------------AGL15                                                                             <---------AHL20(2)                                                               <---------ICU4--------->AHL20(1)                                                <---------AHL20(2)           <---------AHL20(1)                                                <---------YAB1--------->ICU4--------->AHL20(2)    ---                                                --------->AHL20(2)<-----------GT1   --------------->AGL15                                          --------->AHL20(2)--------->YAB1  --------->YAB1 <--------- --------MYB46(3)                         <---------AHL20(2)--------->AHL20(2)<---------YAB1    ----- -----MYB46(3)    ------------>CBF      --------->YAB1  <---------AHL20(2) <---------YAB1---------->DOF2 >DAG2    --------------->AGL15--------->AHL20(2)    ----------->GT1   <----------DOF2----------->TBP >DOF2    ==========================================================================================MADS_MADS   gttgttgagtttcttctaaatgcaatccagcatttaaaacaaaaataaatataaatgtttaataaaaattaccctttattatatttctttaaaaagacaa  22620900                                                                                           --------->YAB1                                                                                   <---------AHL20(2)                                                                                   <-----------TBP                                                                                   --------->AHL20(2)                                                                                 --------->AHL20(2)                                                                                 ----------->TBP                                               <---------ARR14(2)                <---------AHL20(2)                                               --------->GLK1(2)               --------->AHL20(2)    ---------->DOF2   <-----------GT1          <---------ARR11(1)              <---------AHL20(2) -------->GT1        --------->AHL20(2)   --------->ANAC58             <---------ANAC46<---------AHL20(2) -ID1       --------->ANAC58              --------->ANAC58   ------------>CBF  ----------->TBP ----->DOF2 --------->ANAC58            ---------->DOF2 <---------MYB46(3)   ----------->TBP   aagaaaaaaagaagaagcaaaatttaactaaatgtctaaaacaaaagcaaatctatagttgttcacaataagtgtgtgtatatatatatataatcttcat  22621000              ----------->RAV1(1)          ------>MYB83           <-----------GT1                 ------>MYB46(1)    <---------ARR11(3)                     -------->P    <---------ARR11(1)                    ------>ZmHOX2a(1)    --------->ARR11(3)                 ------>ZmHOX2a(1)    <-----------ARR10               <---------ATERF1(1)   <---------CCA1(2)      --------->WOX13(1)      <----------ID1                       <------ZmHOX2a(1) --------->YAB1         ------------>CBF <---------MYB111(2)              --------->YAB1           <-   atatcatatcttatcaccacagaaaaatcaatccatggctcctcctaccaagagaacaagagtagaaatggcagaatcatcaaataagaggatgaaacct  22621100                                            <----------TaMYB80                                           <---------ARR14(2)                                           --------->ARR14(2)                                           <-----------ARR10                                          <---------CCA1(2)                                          <---------ARR14(1)                                        --------->ANAC46                                <---------ICU4                   --------->ALFIN1     <---------ANAC55(2)                              <---------ARR11(3)           --------->LBD16     --------->ICU4      <-----------HVH21         <-------GAMYB    <------           ------>ZmHOX2a(1) --------->YAB1<---------ARR11(1)               --------->ALFIN1  -------       --------->ARR14(2)  ----------------------->TaNAC69(2)               <-----------RAV1(1)  ----       <---------ARR14(2) <---------GLK1(1)------->TEIL            --------->MYB46(3)    --------->ARR11(3) --------ZAT6      <-----------RAV1(1)  --------->ANAC55(2)      <-----------GT1     ---------->DOF2   agtgaaacggttcctgaagatgtgttggaactcatgatgtctacgtatcttcccgtccaatctctgttaacaactcgtgtgttgtccaaaagatttcgcg  22621200                                                     <---------ANAC46                                                  --------->O2                                                  <---------O2                                           <---------HSFB2a(2)                                           --------->HSFB2a(2)                                           --------->HSFC1(1)        --------->HSFB2a(1)          <---------ARR11(3)        <---------HSFB2a(1)          <---------AHL20(1)       <-------TEIL                  --------->AHL20(2)                                        ------     <---------SPL7                  --------->AHL20(1)            <---------MYB46(3)         <------ ---HSFB2a(2)           >>>>>>>>>>GATA-1   <---------HSFC1(1)      --------->MYB111(2)      --------- -->HSFB2a(2)    <---------WRKY18(1) --------->ARR11(3)  --------->DAG2             --------->DAG2 ------->HVH21  ----------->HVH21    <---------AHL20(2) ---------->DOF2            ---------->DOF2   agaccgaggtacgttctcttgacctcgatttcagtggaatatattctagaagacgtcgtaaagtagaagttgttggcatcatcgaaaaagtgttcaatca  22621300       <------ZmHOX2a(2)     <------ZmHOX2a(1) <-------TEIL   <---------TOE2(3) --------->ARR14(2) --------->MYB52(1)  <---------GLK1(2)            <--------P ---------->DOF2     <---------ARR14(2)         <---------ANAC46 --->YAB1        <---------At5g28300    --------->YAB1 ---ATHB12      <-----------GT1        <---------ATHB12   --------->AHL20(2) >WOX13(1)     <-------TEIL          --------->WOX13(1)----------->GT1   acataaaggatcagagattcaccgattcgttctacttctcaatcatattggggtagaagataaaatcatctcatggaccaatacatgttttgacaaaaac  22621400                                                                    --------->REM1(2)                             --------->HSFB2a(2)                   --------->ALFIN1                             <---------HSFB2a(2)                 <---------MYB46(3)                --                          --------->GLK1(2)                     <---------DEAR3(1)                 <-                          --------->ARR11(3)                   --------->At4g35610               ----                          <---------ARR11(3)                   <---------At4g35610        --------->TOE1(2)                <---------GLK1(2)---------->DOF2               --------->ZAT2            <---------ZAT2                <---------ARR11(3)                             <---------ZAT2            --------->At4g35610                --------->ARR11(3)--------->DAG2            <---------LBD16              <---------At4g35610      <---------ANAC58 <---------------AGL15            <---------GLK1(1)                --------->ZAT2      <---------ANAC58 --------------->AGL15          --------->ATHB12       <---------REM1(2)  <----   atcaaggagcttgtcttagatttttcaaaatctagaaaagttatggccatccccattgatttctcggctgtggagagtctacaagttttgaagctgcgat  22621500  Previous    Next  AGI:  At1g61320.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G61330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78502.1); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 22621035    to: 22623518    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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