Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------->MYC2                                    <-------MYC2                       --------->ATHB12                       <---------ICU4                                                              <-                       <--------HAHB4                                                             <--                       --------->YAB1      <---------TOE2(3)                           --------->LBD16                      <---------ATHB12     <---------TOE1(3)                          --------->At4g35610                <---------At4g35610 ------->MYC3                                      ----------->RAV1(2)                --------->At4g35610 <-------MYC3                       --------->AtMYB61--------->LBD16          <---------ANAC58         <---------ANAC46             <------ZmHOX2a(2) <-----------HVH21--          <---------ANAC46    --------->HSFB2a(2)              <---------ARR11(3) <---------ARR14(2)          <---------ANAC58    <---------HSFB2a(2)----------->HVH21  --------->ANAC46  <---------LBD16     <---------ICU4 --------->WOX13(1)    <-----------GT1     <------ZmHOX2a(1)   --------->ARR14(2)- --MYB52(1)    ------->TEIL  ----------------->AGL1     ----------->HVH21 <---------ALFIN1        ---   ccttcaaacatttcgtgcatctcaatcatttgccagaacgtgtataacgttatgacccatgacaggatcaacaccacaactccaggtcccctgaaaacaa  22605400         <---------ARR11(3)                                                     --------->MYB52(1)         --------->ARR11(3)                   ---------->DOF2                 <---------SPL7        <---------CCA1(2)                  <------ZmHOX2a(1)                 <---------ANAC58    --------->AHL20(2)                  <---------LBD16     ------>MYB46(1)  <---------ANAC46   <---------ICU4                <---------YAB1             ------>MYB83     <---------ANAC58  --------->ICU4                 <---------AHL20(2)    <-----------GT1  <---------TGA1a --------AHL20(2)               --------->AHL20(1) --------->CCA1(2)    <---------bZIP60(2) -------AHL20(1)                <---------AHL20(1)--------->ARR11(3)    <---------O2 ------->AHL20(2)               --------->AHL20(2)<---------ARR11(3) ----------->HVH21        ------- -------->AHL20(2)         --------->AHL20(2) ====================================bZIP_DOF   <------- ------>AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------ARR11(3)         --------   aataatttttatatctctagactgactcttaaaatataattctcaggaaaaagatatataccatccaagttctgacatggcgtaagggagaccaagaact  22605500                                                                                             --------                                                                                             --------                                                               --------->At5g28300          <--------                              --------->At4g35610     <---------ANAC58        <---------ATHB12                              <---------At4g35610     --------->ANAC55(2)    <---------ARR14(2)   ---      ------>MYB46(1)      ---------->DOF2            <---------ANAC46  --------->ANAC58    ---------      ------>MYB83 <---------ANAC46                   <---------ANAC55(2)    --------->ARR14(2)<-----    <---------MYB111(1) <---------ANAC46              <---------ANAC58  --------->ANAC58    <--------    --------->MYB46(3)  <---------HSFB2a(2)   --------->YAB1  --------------->AGL15  <---------At4g35610 -->GLK1(1)        <---------bZIP60(2)     --------->WOX13(1) <---------------AGL15  --------->ZAT2 = --ARR11(3)     ----------->HVH21   --------------->AtSPL8   <-----------------AGL3  <---------ZAT2 - ->ARR11(3)     ----------->TGA1    <---------------AtSPL8   <-----------------AGL2  --------->At4g35610   ccagcaccaactatggcagtgacgttgtggaaagctgaatagtaccaattagcatttcgtgatgctgtaattggaagccaatcttccagctcaaatgatt  22605600                                                           --------->ANAC58                                                           --------->ANAC58  ------>ZmHOX2a(1)                      --------->ANAC46  --------->ANAC46 ->ATHB12                                --------->ANAC58  --------->ANAC55(2) >HAHB4                                  --------->ANAC58 --------->SPL7 -YAB1                                --------->ARR14(2)  --------->RAP2.6(3) ------>ARR11(3)                   <---------AHL20(2)    --------->MYB52(1) >ICU4                           --------->AHL20(2)     <---------SPL7 ----WOX13(1)               ------>ZmHOX2a(1)       --------->YAB1 -ATHB12                   --------->TOE2(3)       <---------YAB1 ==================================HOX2a_HOX2a   --------->YAB1                      --------->MYB46(3) ----->ZmHOX2a(2)    <---------YAB1--------->AHL20(2) --------->At4g35610   ---------->DOF2   gatcctgtaagtctcttagagttttcattcctcaaatttatatacgcaaaattatcatcttacggcacatcaagcttcaaaagcggaacaaactctctca  22605700                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                                                      <---------AGP1                                                                      --------->ARR14(2)                                                                      --------->GLK1(2)                                                                      <---------ARR14(2)                                                           =================HOX2a_HOX2a                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                          ==================HOX2a_HOX2a                                                         <---------ARR11(3)                                                         <---------ARR14(2)                               --------->YAB1            --------->AGP1 ------>ZmHOX2a(2)                               <---------ICU4            --------->ARR14(3)                              <---------YAB1             <-----------ARR10                             <---------ARR11(3)          --------->ARR11(3)                         --------->YAB1                  --------->ARR14(2)                 ---------                         <---------ICU4                  <---------ARR14(3)   ----------->HVH21                   --------->YAB1                        <---------AGP1<------ZmHOX2a(2)   <---------GLK1(1)                  <---------YAB1                --------->TOE2(3)    <------ZmHOX2a(1)--------->TOE1(2)               <-------TEIL  --------->ARR11(3) --------->TOE1(3)  <---------TOE2(3)------->TEIL<----   agaccaaagtttccaaattcattataaacatgatcatcacaaatagcatacctcaacaagatcttggtttaggatctggtttgacgaacttgggattcct  22605800                                                         --------->ANAC46                                                         --------->ANAC58                                                         --------->ANAC58                                                      <---------ZAT18                                                      --------->ZAT18                                                      --------->ZAT14                                                      <---------ZAT14                            <---------ANAC58       <---------ANAC58                        <---------ANAC58           <---------ANAC46                        <---------ANAC58     --------->DAG2                        <---------ANAC46  --------->HSFB2a(2)                 <------------CBF         <---------HSFB2a(2)                                 -------                --------->KAN4(1)  --------->GLK1(2)<---------ZAT18                      ---------->DOF2 >GLK1(1)    <------ZmHOX2a(1)  ------------>CBF   <---------ANAC58                ----------->GT1 ------DOF2<---------TOE2(3)<---------ANAC58---------->DOF2                       ----------->GT1 <--   ttcattgtcaacttaggaatattgtgacttgcgagacaatctttctaaaagttgtgtgcacgagagatagagagacagatagagagggaataaaagttga  22605900       <------------CBF      --------->ATHB12    --------->TOE2(3)<---------AHL20(2) <-----------GT1     --------->AHL20(1)                <---------MYB59 -->WRKY12           <---------AHL20(1)  --------->At4g35610               ------>ZmHOX2a(1) --------DOF2       --------->AHL20(2)   <---------At4g35610    ----------->HVH21                <---   cttttacctcattgaagggagattatattttctgaagtttattagctggttctaatgcctaattctatgacctgttcctgattttgtattcttgaaatgg  22606000                                                  <---------WOX13(1)                                                 <---------ANAC46                                                 <------------CBF                     <---------AHL20(2)         --------->ATHB12              <---------bZIP60(1)             <---------MYB52(1)   --------->YAB1            <-------GAMYB                    <-------GAMYB         <---------ICU4         <---------ANAC46                   <---------MYB46(3)  --------->YAB1              ---------         <---------ANAC58                   --------->MYB52(2) <-------TEIL                -------->P         <---------ANAC58                  <-------TEIL ------------>CBF                <---------MYB52(2)       <---------ANAC46      --------->HSFB2a(2)<---------MYB46(3)--------->ICU4      --------->ANAC46 ------ANAC46 --------->bZIP60(1)       <---------HSFB2a(1)  --------->YAB1 ----------->RAV1(1)   cctaaaattttgtgtgttgtcatttttttttctcgcactgaaatgttcgttgattggatacaatgttcataatgactccaccagttacacactaacccta  22606100                                             --------->ATHB51                                            <---------YAB1                    <----------DOF2                                            --------->ICU4                   ------>ZmHOX2a(2)                                         <---------YAB1                    --------->ARR14(2)                                    --------->ATHB51                       <---------ARR14(2)                                    <---------ICU4                   --------->ZAT2                                   <---------YAB1                    --------->At4g35610                                   --------->ICU4                    <---------ZAT2                                 --------->TOE2(3)             <---------AHL20(2)          <---------AHL20(2)                                 --------------->AGL15        --------->AHL20(2) ---------->DOF2                                ----------------->AGL1     <---------GLK1(2)<------ZmHOX2a(2)     <---------YAB1--------->ATHB12<---------ATHB51     --------->YAB1     --------->ARR11(3) >ZAT6            <---------YAB1----------------->AG<---------AHL20(2)     <---------ARR11(3)   tttgtatatgattctatgtcactattggaaaatttccataattgttattattgtttaatcagaattttataagctgggatctttagagcccatttttttt  22606200                                                                              <---------ANAC55(2)                                                                     <------MYB46(1)                                                                     <------MYB83 <---------YAB1                                   <---------YAB1                    <---------ANAC46                                 <---------ICU4       --------->TOE1(2)       --------->ANAC55(2)                              --------->WOX13(1)   <---------GLK1(1) <---------ANAC55(2)                             <-------TEIL          --------->GLK1(1) ----------->GT1      --------->TOE2(3)                    --------->ATHB12        <---------REM1(1)       --------->MYB46(2)    --------->TOE1(3)               --------->REM1(1) --------->YAB1  <------ZmHOX2a(1)  --------->MYB59--------->ZAT6   ttgtgtccatctcatctacatctcattggggtccatcatcactgagatgtaggaattctacgaatgcaattaggtgaatcacttatcagtaaccttgaaa  22606300  Previous    Next  AGI:  At1g61270.1    Description:  lysine and histidine specific transporter, putative. similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT3G01760.1); similar to histidine amino acid transporter [Oryza sativa (indica cultivar-group)] (GB:CAD89802.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 22603330    to: 22605805    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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