Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------AHL20(1)           --------->AHL20(2)           --------->AHL20(1)           <---------AHL20(2)          --------->AHL20(2)      <------ZmHOX2a(1)     ----------->GT1   --------->TOE1(2) ------->AHL20(2)     <---------HSFB2a(1) --->AHL20(1)        <---------KAN4(2) ----AHL20(2)        <---------------AtSPL8               <---------PCF2 ----AHL20(1)      <------ZmHOX2a(1)                   <---------------AtSPL8  <---------ARR14(2) --->AHL20(2)    <---------TOE1(3)              --------->AHL20(2)--------->MYB52(1) -->AHL20(2)     <---------TOE2(3)           <----------DOF2  --------->AtLEC2 --------->ARR14(2)   attaagtaggaaataaattaaggaatgtacgaagaaacttgttgtctcttttaaatagtgggacatacaaacgaattagcaaatttggattacatttagt  22575900                                        <---------CCA1(1)                                        <---------RVE1(1)                                    <-------                                       <---------GLK1(2)                                   <---------YAB1                                       <---------ARR11(3)                                <---------ICU4                                       --------->ARR11(3)                                --------->YAB1                               --------->YAB1                                           --------->ICU4                 ----------->GT1 <---------YAB1               --------->HSFB2a(2)       <---------ATHB12               ---------->DOF2<---------YAB1              <----------DOF2             --------->YAB1  --------------->AGL15     <---------ICU4              ------->TEIL                  --------->WOX13(1)  <---------HSFB2a(2)       --------->YAB1        <---------AHL20(2)                <---------YAB1  --------->HSFB2a(2)      --------->ICU4        --------->AHL20(2)               <---------ICU4  <---------------AGL15 --------->AHL20(2)    <---------AHL20(2)                 <---------YAB1 ----------------->AGL3--------->AHL20(2)    <---------AHL20(2)--------->LBD16   --------->ICU4 <-----------------AGL2<---------AHL20(2) <---------AHL20(2)  --------->ANAC46--------->ICU4 --------   atttctaaaaatagttgaaaagtatataaattatgatcaaagatttttttatttaatgaactttccgaaacttaaatctagtgattattaatcatgatat  22576000                                                                                <---------MYB52(1)                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                          --------->RVE1(1)                                                                        <---------ICU4                                                                        --------->AHL20(2)                                                                        --------->YAB1        -------                                                                    --------->AHL20(2)        -------   <------MYB83                                                     <---------AHL20(2)        <------   <------MYB46(1)                                                 --------->AHL20(2)         <------  --------->MYB46(2)                                               <---------AHL20(1)        --------  --------->MYB111(2)                                 ---------->DOF2--------->YAB1       --------->YAB1 --ARR11(3)                       ----------->GT1<---------GLK1(2) --------->AHL20(1)  --------->WOX13(1) ->ARR11(3)      <---------WOX13(1)   <---------AHL20(2)           <---------AHL20(2)<---------YAB1 <   tagtttggtgactgaattgaatgatgtattgaaattttgttatattgatcagattataaagagaactaatttaataatatccgttatatcattcattata  22576100                                                                           <---------ICU4                                                                           -------->HAHB4                                                                          --------->ICU4                                                                          <---------YAB1                                                                        --------->YAB1                               <---------YAB1                           <--------HAHB4      --------->At5g28300     --------->AHL20(1)                        <--------ATHB1    <---------DEAR3(1)       <---------AHL20(2)                         --------->ATHB51   ------>ZmHOX2a(1)         --------->AHL20(2)                         <---------ICU4              - -->AHL20(2)                <---------AHL20(2)                         --------->AHL20(2)          <- -->AHL20(1)             <---------YAB1                                <---------ATHB51            <- ---AHL20(2)            <---------AHL20(2)           --------->ANAC58  <---------ATHB12           <-- ---AHL20(1)            --------->AHL20(2)           --------->ANAC58  --------->ICU4            ---- ->AHL20(2)            --------->AHL20(2)  <---------ANAC46          --------->YAB1             ----- ---------YAB1  --------->YAB1<---------AHL20(2)   ---------->DOF2  --------->ZAT6              -----   ttatcctcggtgaaactatcaaaaattaaaattattttggattttgggtatacaaaagcactattatctaacaataattattccaacaagttgtggtaat  22576200                              ----------->GT1                             --------->CCA1(2)                        ---------->DOF2              --------->AHL20(2)              <---------AHL20(2)                            <---------DAG2       ------------------------>ANAC81                      <----------DOF2   xxxxxxxxxxxxxxxx>smallRNA(i)                             --------------->AGL15 ---------->GT1     <---------TOE2(3)                       <---------------AGL15 --------ANAC55(2) ---------->DOF2               <---------AHL20(2) --------ANAC46   --------->AHL20(2)             --------->AHL20(2)                             ----- -------LBD16 --------->AHL20(1)            <---------AHL20(2)                             --------->ANAC58 ----->MYB52(1)   <---------AHL20(2)        --------->AHL20(2)                             --------->ANAC58 ---->ICU4    <---------AHL20(1)        <---------YAB1   <---------AHL20(2)         ---------->DOF2 ------>TGA1 --------->AHL20(2)      --------->GLK1(2)   <-----------GT1        <----------ID1  <----   gacggaaaaaatcgaataaattaaagaaaagatagaaaaattctgtttaaattaaaaatttactttatttagaccaaaaaaaaaaacaaaggcacacaaa  22576300                                                                                                 ----                                                                                                 ----                                                                                                -----                                            <<<<<<<<<TBF1            ----------->GT1         --------          *TSS                        <---------ATHB12 <----------DOF2            --------->AHL20(2) ---->GLK1(2)                        ------>MYB46(1)  <---------DAG2 --------->ANAC58      --------->AtMYB61 -------ARR10     <----------DOF2    ------>MYB83<----------DOF2     --------->ANAC58   --------->ANAC46   tctagtctcaagtctttcttctttgttcaaaaacaaaccaatcttcttcttctttgccttttgaacaaaacaagaaaaaacaaataaaacaaaccacaac  22576400                                                                                 ---------->ID1                                                                                <-----------GT1                                                                      --------->bZIP60(2)                                                                      --------->ZAT2                                                                      <---------ZAT2                                                                      ========================bZIP_DOF                                                      ------>NtERF2   --------->TGA1a                                                     --------->DEAR3(1)     <---------GLK1(2)                                              <---------HSFB2a(1)     --------->ANAC46 --->GAMYB                                    --------->HSFC1(2)      --------->O2 <----------DOF2 ----->YAB1                                   <---------HSFC1(2)    <---------ALFIN1 ---->MYB46(3)---------->ID1          --------->ARR14(2)   <----------DOF2  --------->ARR11(3) ->MYB46(3)--------------->AtSPL8     <---------ARR14(2)   =====================bZIP_DOF <----------DOF2   catcaatttctaatttgttccatttcacaaacgtcgaacaaatccagacccttcgccaactctttctctcccacctcagatttttctttttctttccttc  22576500                                                                                                  <--                                                                                         --------->ANAC55(1)                                                                                         --------->ANAC46                         <-----------GT1                                              ------>MYB46(1)                   --------->AHL20(2)                                     <---------ETT(1)   --------                   <---------AHL20(2)                                     --------->ANAC46  ---------                  <---------AHL20(1)                       <---------ANAC58           ------>MYB83<--                  --------->AHL20(2)                       <---------ANAC46------>NtERF2 --------->ANAC58                  <---------AHL20(2)        --------->ETT(1)        <-----------GT1  <---------ALFIN1              <---------AHL20(2)       <---------ANAC58    <---------ANAC58----------->RAV1(1)<------             <---------AHL20(2)        <---------ANAC58<---------DAG2     ----------->HVH21----------             --------->AHL20(2)  <---------ALFIN1      <----------DOF2 --------->TOE2(2) --------->YAB1            --------->YAB1    --------->ANAC46        <---------GLK1(2)--------->TOE1(2) --------->ANAC58   ttactaattttgaattttaatttaatttttctcccccattttcttgtcggaaaacagcttttcgtgtaatttacctccgacacaaacccactcgtaacgg  22576600          <---------ANAC58 --------DOF2                                                                                       < ->RAP2.6(3)        --------->YAB1                                                                  - >MYB52(1)<---------ANAC46                                        <------------------------ANAC81 <-- -------DAG2  ---------->ID1                            <---------MYB46(3)                        <-- ------MYB.PH3(1)  <---------YAB1       <---------CCA1(2)<-------GAMYB   <---------MYB52(1)       <-- ->HVH21  <---------ANAC58           <----------DOF2    --------->MYB52(2)        ---------->ID1 ----   ctttttctggtttcttgtcttatcataccagattacaaacttttatcttggtcttggtttgttgtctctgtctctgttttttttgttttttttgagaatt  22576700      <------NtERF2     ----------->GT1    --------->ETT(1)      <------MYB83    <---------DEAR3(1)    <------MYB46(1)                        <---------TOE2(3)   <---------------------WRI1                           <---------ANAC58  <-----------HVH21       <---------ANAC46              <---------ANAC58 <---------MYB46(3)      --------->MYB59                <---------ANAC55(2) ---------AtMYB61        --------->MYB46(2)             <---------ANAC46 -------->ALFIN1         --------->MYB111(1)           <-------TEIL                 ================= -------ANAC46   ----------->GT1                      --------->ALFIN1              <----------DOF2 -------ANAC58  ----------->GT1                     <---------ANAC46              ---------->ID1 -------ANAC58--------->DAG2                        <---------ANAC58          ======================= ----->ATHB12---------->DOF2   ---------->DOF2      <---------ANAC58          <----------DOF2      <-   gagtggtcggagaaaaaaagggaaaattaggtggaaagcgctaacatgcgcttggggtgcgtaagttaagttttgggtttctttttctttttcaaaatcg  22576800  Previous    Next  AGI:  At1g61215.1    Description:  BRD4 (BROMODOMAIN 4); DNA binding. similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46851.1); contains InterPro domain Bromodomain (InterPro:IPR001487) Range:  from: 22576310    to: 22579192    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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