Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->WOX13(1)                   <-------GAMYB                  --------->MYB52(2)               <-----------TGA1               ------------>AtMYB77                                                          <-------               --------->TOE2(3)                                                 --------->ARR11(3)               <-----------HVH21                         <---------YAB1          <---------ARR11(3)     <----------DOF2<---------MYB52(1)                <---------YAB1       XXXXXXXXXXXXXXXXXXXX>MIR861-3P -----ARR11(3)--------->ANAC46                      <-----------GT1   <---------TOE2(3) --------->ANAC58 >YAB1       <---------TOE2(3) --------->YAB1 ----------->GT1         <---------TOE1(3) --------->ANAC46 -ICU4      <-----------GT1--------->MYB46(3)<---------WOX13(1)     ------>ZmHOX2a(1)   --------->ANAC58   tcttcttctttttttaacgtcagttagcatccatcatacatctatggattgaaattactataattcattcctaaggttgaaaatgtcttcaagaaacaaa  22567800                  <-----------RAV1(1)                  --------->ALFIN1                <---------ANAC46                <---------ANAC58                <---------ANAC58                --------->ANAC55(2)                <---------ANAC55(2)      --------->AHL20(1)                <---------TGA1a          <---------ICU4                <---------bZIP60(2)      <---------ARR11(3)                ==============================================bZIP_DOF                >>>>>>>>>>HY5            --------->ARR11(3)                <---------ANAC55(1)      <---------AHL20(1)                --------->O2          --------->AHL20(2)              <---------YAB1                <---------O2          --------->YAB1                <---------ICU4               ----------->STF1  --------->AHL20(2)                 --------->YAB1              <---------TGA2(2) <---------ATHB12                   --------->ICU4          --------->ICU4       ------>MYB46(1)               --------->MYB52(1)        --------->CCA1(2)      ------>MYB83                <---------MYB52(2)   ----------->GT1  <--- --MYB52(2)  ----------->TGA1 --------->WOX13(1)   ---------->DOF2 <---------ATHB51              ----   caaaaccaagagatgatgacgtgttgcctcaccaatcaaataatattttcgacaaaagaaaactaacaaattatgatggagttggagaaaaaaactgtac  22567900                              --------->ANAC55(2)                              --------->YAB1                    --------->DAG2               --------->ANAC58                               ---------->DOF2   <---------ARR14(2)               --------->ANAC58     <-----------GT1      --------->LBD16        --------->ARR14(2) ------------AGL15           ---------->ID1             --------->LBD16    <-----------HVH21 ----------->AGL15        <----------DOF2              <---------LBD16     <-----------TGA1      ----   caatagaagtcaattggaagcaagggttcttttcgtaatttccactcgaattcaatgcccggacaaaagggtgttttcgtcagaaccgagaagaacgaac  22568000                                                                              --------->MYB55(1)                                                                              --------->ORA47(1)                                                                             --------->DEAR3(1)                                                                             ------->GAMYB                                                                             ----------->HVH21                                                                             <---------MYB46(2)                                                                             --------->MYB46(3)                                                                             <---------MYB55(2)                                                     --------->AHL20(1)     --------->DEAR3(2)                                                     <---------AHL20(2)    -------->P                                                     --------->AHL20(2)    ------>MYB46(1)                                                 <---------AHL20(2)        --------->MYB52(1)                                                <---------AHL20(2)         ------>MYB83                                            <---------AHL20(2)            --------->MYB55(1)                         --------->ANAC58<---------AHL20(1)              <---------MYB59                         --------->ANAC58<---------AHL20(2)              <---------MYB111(1)                         --------->ANAC46--------->AHL20(1)      <---------AHL20(2)                <---------ALFIN1        --------->YAB1           --------->AHL20(2)  --------->AHL20(2)               <---------WRKY12         --------->AHL20(2)   --------->AHL20(2)------>MYB46(1)               --------->ZAT18          <---------AHL20(2)   <---------AHL20(2)------>MYB83 ----->MYB52(1)<-------TEIL      ----------->GT1--------->AHL20(2)       --------->AtMYB61   aacgaagaaactagaggtccactgtccaagaaaaatgcttaattatatttttaaattttttaaaaaattaaaaaacctaccgaccgattaaaaaaaaaaa  22568100                                                            <---------ANAC46                                                            <---------ANAC58                   <-----               --------->YAB1  <<<<<<<<<TBF1   --------->TOE2(3) <-----------GT1    <---------ANAC58          <---------DAG2    <<<<<<<<<TBF1      --------->YAB1    *TSS               <---------ANAC58          <----------DOF2<<<<<<<<<TBF1      <----------DOF2 <---------ANAC58       <XXXXXXXXXXXXXXXXX      ---------->ID1   <------------------------ANAC81  <---------At4g35610------->TEIL    <---------CCA1(2)   aaactttcttcgctttatcaaaatttcttcttcttcttctctgtttctttcttaattctgcttcgtgtcactatttgaatctgatttcgtctcgtttctt  22568200                   <---------GLK1(2)                 <---------YAB1                 ----------------------->TaNAC69(2)              ------->TEIL              --------->ARR14(2)              --------->GLK1(2)              <---------ARR11(1)              <-----------ARR10              <---------ARR14(2)                         ---------->DOF2             <---------GLK1(2)                         ------->GAMYB             <---------ARR14(1)                       --------->ANAC46           --------->ANAC46                         --------->MYB52(1)           --------->LBD16                     <-----------ARR10           <---------ARR14(2)          --------->HSFB2a(2)            <---------GLK1(1)                 --------->ARR14(2)         <---------LBD16                 --------->GLK1(1)       ------>ZmHOX2a(2)       <---------GLK1(1) -----DOF2--------->LBD16    <---------TOE1(2)<---------CCA1(2) <------ZmHOX2a(2)   <----------DOF2 XXXMIR1886.1<---------CCA1(2)--------->ANAC55(2)--------->TOE2(3)        <---------CCA1(2)   tcaatcttcttccccgaatctgattctctctcacgttttttggatttcaaatctcaacggaaagcgatctcttctcatatccctccctttgaaatctccc  22568300                                                                                   --------->ARR14(1)                                                                                  <---------GLK1(2)                                                                                  <---------ARR14(2)                                                                                  --------->ARR11(1)                                                                                  --------->ARR14(2)                                                                           <---------At4g35610                                                                           --------->At4g35610                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                        <---------MYB52(1)                                                                      <---------ANAC55(2)                                                                      --------->HSFB2a(2)               <---------ANAC46           <---------At4g35610         <---------HSFB2a(2)              ---------->ID1     --------->ARR14(2)                  <---------LBD16<-------TEIL            <-----------RAV1(1)  <---------GLK1(2)  <---------At5g28300--------->LBD16          <---- --------->ARR11(3)              <---------ARR14(2)<-----------GT1 --------->ARR14(2)         ------- <---------ARR11(3)   <---------ZAT6      --------->At4g35610      <---------ARR14(2)         <------   taaaatctcgacctctgtcgtttagtgacaattcggatttttgtagctccgattcaccgttttaaatcgattccggaagctacagattcgattccagatt  22568400                      --------->ARR14(1)                     <---------ARR14(2)                                      ------>ZmHOX2a(1)                     --------->ARR14(2)                                     --------->TOE1(3)                     <---------GLK1(2)                                <---------ANAC55(2)                  <---------ANAC55(2)                                 --------->ANAC55(2)                  --------->ANAC58                                    <---------ANAC46                  --------->ANAC58                                   <-------TEIL                  --------->ANAC55(2)                            --------->ANAC46                 <---------LBD16                                 --------->ANAC58                --------->MYB52(1)                               --------->ANAC58   <-----------GT1               ----------->HVH21                          <---------MYB46(3)--------->TOE2(3)              <---------ALFIN1                            ----------->GT1<---------ARR14(2) ---TEIL <-----------GT1                               <---------ANAC58  --------->ARR14(2) -->ARR14(2)  <-----------HVH21                        <---------ANAC46  ------->TEIL<---------TOE2(3) ---ARR14(2) --------->ANAC46        ----------->GT1   <---------ANAC58 <---------CCA1(2)   caaatttctatttccccctcacggattcgctggaaaatcgagttaaaaaatggcgaagcgtggttataagctacgtatccttatattgacgattttgaga  22568500                <---------YAB1            <----------DOF2<---------ANAC58                                    ----------->GT1        <---------GLK1(2)  <---------ANAC58           <---------AtMYB61        <------MYB83     -----   <-----------GT1         <---------ANAC46         <----------DOF2            <------MYB46(1)  -----  <-----------GT1--------->ZAT6                  --------->ANAC58             --------->MYB59   ----- <---------AHL20(2)   <---------GLK1(2)          --------->ANAC58      --------->TOE2(3)       <-----   aattttaacagtttctttatcactgaatcgcttggggtttatttcataaacaagctttggtttattagctcttcgtcaatttggtcaaaatgtttctatt  22568600                                                                                                  ---                                                                                     --------->GLK1(1)                                                                                     --------->CCA1(2)                                                                                     <---------GLK1(1)                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)     <---------ANAC58                                 <---------YAB1             <---------HSFB2a(2)     <---------ANAC58                            --------->AHL20(2)              --------->HSFB2a(2)< <---------ANAC58                                <---------AHL20(2)             <---------LBD16   <-- <---------ANAC58                               <---------ATHB12        <---------AHL20(2)       <--- ---->ATHB51                                    --------->ICU4         --------->AHL20(2)        <--- --->ATHB1                                  --------->ZAT14            <---------AHL20(1)        ---- ---->YAB1 --------->AHL20(2)               <---------ZAT14 ---------->ID1    <-----------GT1    ---- ----YAB1  <---------AHL20(2)      ---------->DOF2   <---------AHL20(1)<---------AHL20(2) <----------DOF2   attgtttgcttaattaaactgagagcaaattgatagaaaaagacactgcaattaatatgtttgtcttctccaattttttttttctggatatgctttgaat  22568700  Previous    Next  AGI:  At1g61210.1    Description:  WD-40 repeat family protein / katanin p80 subunit, putative. similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT1G11160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43364.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 22568165    to: 22575571    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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