Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------GLK1(2)                                                                               <---------ANAC58               <---------At4g35610  --------->YAB1                             ----------->GT1               --------->At4g35610  --------->AHL20(2)                         <---------ANAC46   ---         <----------DOF2           <---------ATHB12--------->YAB1              <---------ANAC58   ---      --------->ARR11(3)   <---------ATHB12 --------->At4g35610          <---------HSFB2a(2)      ---      <---------ARR11(3)   <---------ATHB51 <---------At4g35610    <---------TOE2(3)   --------->YAB1   aatccaaacatctttgtagcagcattcaaataatgcaatgaaattcagctaaatcaaaacgatgaaattgaagttagagaagcgtgtaatcaaaattctc  22544100                             <---------ZAT2                  --------->DAG2                             --------->ZAT2                 ---------->DOF2        ---------->DOF2      --------->At4g35610     --------->GLK1(2)    ----------->RAV1(1)    <-----------RAV1(2)       <---------ARR14(2)  -------->P             --------->TOE2(3)           --------->ARR14(2)              <-----------TGA1 ------>ANAC58           --------->AtMYB61       <---------HSFB2a(2)                <---------bZIP60(1) ------>ANAC58         -------->P --------->GLK1(2) <---------GLK1(2)               --------->bZIP60(1) ------>ANAC46--------->LBD16<---------At4g35610 --------->HSFB2a(2)                --------->bZIP60(2)   aagctaccacaaaagccgagaaaactacctcagcagaatcaggcttctcatctagaatccgataaagcgtttcgatgtcaatagtctcgtcatcatcttc  22544200                                        ------>MYB83      <---------HSFC1(2)                               --------->GLK1(1)          --------->HSFC1(2)                              --------->ARR14(2) ------>MYB46(1)                           ------->GAMYB------>MYB46(1)   --------->HSFB2a(1)                          <---------LBD16 <---------HSFB2a(2)       --------->MYB46(3)                         -------->P   --------->DEAR3(1)  <---------HSFB2a(1)                       --------->MYB46(3) --------->HSFB2a(2)------>MYB46(1)                    <---------ICU4   <---------At4g35610 ------->TEIL                    --------->YAB1   --------->At4g35610<-----------GT1      ------------------------                   <---------ATHB12<-----------GT1<---------ATHB12 --------->ANAC58              --------->YAB1  <---------ARR14(2) ------>MYB83------>MYB83   --------->YAB1           --------->AtMYB61--------->LBD16    <---------MYB59     --------->ANAC58       --------->MYB46(3)--------->MYB52(1)    --------->AtMYB61------>ZmHOX2a(1)                   <   aaactcaaaaccaccatcacaatcatcaaccggaaattcacctcccagaccaaacattgaaccttcctcacccatcaaaaatcacaaaaaaaaaaaaaaa  22544300                                                                         --------->LBD16                                                                         <---------HSFB2a(2)                                                                         <---------LBD16                                                                    <---------ZAT2                                                                    --------->At4g35610                                                                    --------->ZAT2                                                              --------->GLK1(1)                                                             <---------GLK1(2)                                                          --------->ANAC58                                                          --------->ANAC58                                                          --------->ANAC55(1)                                    ---------->DOF2       --------->ANAC55(2)                                 --------->TOE2(3)        --------->ANAC46       --------->LBD16           --------->TOE1(3)        <---------ANAC55(2) --------->GLK1(1)      --------->LBD16       <---------MYB52(2)           <---------LBD16 --------->HSFB2a(2)   -------->P               --------->MYB46(3)          --------->MYB52(1)--------->LBD16 >ANAC81  ---------->DOF2<----------ID1 --------->YAB1<-----------HVH21 <---------LBD16 ---------MYB52(2)       <------ZmHOX2a(1)         ---------->DOF2  <---------At4g35610   aaactaacccgagaaagaacgagaagaggaacaaaccctaaatcagaaaacccaaaagtcacggaatttcagctcccgggaaacccaaatcgaaattcag  22544400                                                                                        --------->DAG2                     ----------->GT1                                                  ---------->DOF2               --------->LBD16                                                       <------ZmHOX2a(1)            <------ZmHOX2a(2)                                                     <---------LBD16           --------->ARR14(2)                                                     --------->HSFB2a(2)           <---------ARR14(2)                 >>>>>>>>>TBF1                       <---------HSFB2a(2)           --------->ARR11(3)         <---------TOE2(1)                      --------->HSFB2a(1)           --------->AGP1             <---------TOE1(1)                      <---------HSFB2a(1)          --------->GLK1(1)          <-------TEIL    <---------ANAC58        --------->HSFC1(2)         ----------->ARR10           --------->SPL7  <---------ANAC58        <---------HSFC1(2)     -      <---------ANAC46           <---------------AtSPL8                     <---------KAN4(2)    <---   aagtagacgcgtagatccagagattgtagaattttcaggtacgacgaagaagaaggcttgagaattgggttttgaaggaattttcgaggaaaggtagaga  22544500                                                      <---------AHL20(2)                                                      <---------YAB1                                                     <-----------TBP                                                   <----------DOF2                                               <---------ANAC58                                               <---------ANAC58                                               <---------ANAC46                                             --------->ABI4(2)                                          <---------MYB46(3)                              -----------                                          <---------DEAR3(2)                       <-----------------AG                 --------->YAB1          <---------DEAR3(1)                        <-----------------AGL1          ----------->GT1      <-----------TBP<------NtERF2  <---------ANAC58  <----------DOF2   ----        ----------->GT1      <---------DAG2  <---------MYB46(3)               <---------ANAC58  ----- -------->ZAT2  --------->AHL20(2)    ----------->HVH21 <------------CBF<----------DOF2 <------------CBF ------ZAT14   *TSS          <----------DOF2 ------>NtERF2   <---------ANAC58 <---------ANAC58 ------   gcagttgggatagagaaaataaaaatcgcgactttttgtagcgacggtggcttctttttattgccttgttctctcttttggctttctccgaattggaaaa  22544600                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                <----                                                                                            ---------                                     <---------TOE2(3)                                      ---------                               --------->AHL20(2)                                          --------->ICU4                             <----------DOF2                                               <---------YAB1   --------->ANAC46       --------->LBD16 --------->HSFB2a(1)       <----------DOF2      --------->YAB1 >GT1 --------->AtMYB61   ------>NtERF2   <---------HSFB2a(1)     <------------------------ANAC81---- ------->GT1            <---------LBD16 --------->MYB52(1)    <----------DOF2          <-----------GT1 ---->DAG2             --------->MYB52(1) <---------HSFC1(2)---------->ID1    <-----------GT1   ----- ---->DOF2           <---------GLK1(1) <------ZmHOX2a(1)   <-----------GT1 <---------AHL20(2)  ------   agtaaacaccacaaggctatgggacttccggctttaaataaggaacggtcgaacatttgtttttctttttctttcatttttttccattttttcattattt  22544700                                    <---------MYB52(1)                                    <------NtERF2                                   <-----------TGA1                                   <---------RAP2.6(3)                                   ------>NtERF2                                   <-----------HVH21                                  --------->RAP2.3(2)                                  --------->DEAR3(1)                                  --------->RAP2.3(3)                                  --------->RRTF1(2)                                  --------->bZIP60(1)                                 --------->ORA47(2)                                 --------->ERF1       --------->ATHB12          --------->RAP2.3(1)      <---------YAB1 --------->AHL20(1)      --------->ICU4 <---------AHL20(2)   <---------YAB1    <---------AtLEC2 <---------AHL20(1)  <----------DOF2 ---------ICU4      <---------AHL20(2)  <---------ICU4 ------->HAHB4      --------->AHL20(2) --------->ICU4 --------ATHB51     --------->YAB1--------->RRTF1(3)                                   <---------AHL20(2) ------->ICU4      <---------YAB1<------NtERF2                                         --------->AHL20(2) -----AHL20(2)   --------->YAB1  --------->RRTF1(1)                      ---------->DOF2  --------->ICU4 >AHL20(2)--------->AHL20(2)    <---------RAP2.3(1)                <---------AHL20(2)--------->TOE2(3) >ATHB51 <---------YAB1   <---------AHL20(2)  <---------ZAT6       --------->AHL20(2)<----------DOF2< ----->YAB1     <---------YAB1 --------->ANAC46   ---------->DOF2 --------->AHL20(2) <---------------AGL15 ---->AHL20(2)  --------->AHL20(2)<---------bZIP60(1)       --------->YAB1           --------------->AGL15 --->AHL20(2)   <---------AHL20(2)--------->bZIP60(2)       <-----------GT1 ----------->GT1<---------ICU4   aataatgcatgattatatataattatattttatgcgccgtcatctttattgttaaagcaaaatcacaatttaaacaaaaggaaacaactttaattagtag  22544800                                                           ----------->GT1                                                       <---------AHL20(1)                                                       --------->AHL20(1)       ----------->GT1                                                       <---------AHL20(2)       <---------ANAC58                                                    <---------ICU4        <---------AHL20(2)   <-----                             <---------AHL20(2)    --------->ICU4     <---------YAB1        <--------                           <---------RVE1(1)       <---------YAB1   --------->AHL20(2)      <--------                           <---------CCA1(1)     <---------ICU4     <---------AHL20(2)      ---------                --------->ANAC55(2)              --------->YAB1    <---------AHL20(2)--------->ICU4 -      --------->ZAT14     <---------ARR11(3)    <---------YAB1   <---------ICU4 <---------ANAC46   <-      <---------ZAT14     --------->ARR11(3)    <---------ATHB12--------->ICU4  <---------ANAC58   -- ------ZmHOX2a(1)  --------->MYB52(1) --------->ALFIN1 --------->AHL20(2) <---------YAB1  -----------   taggaaactgaagtgtttaagtaatggagatttttttgaagtgtttgctaatcataatttattgtaaaaattatttttaattgtgtgaaaattagatttt  22544900 ------GT1 -ARR11(3) -GLK1(2)  <---------AHL20(2)                                                          --------->ATHB12 >ARR11(3) --------->AHL20(2)                                                     ------>ZmHOX2a(2) -------->ZAT6           ---------->DOF2                  <------ZmHOX2a(2)     --------->ARR14(2) --------ZAT14         <<<<<<<<<MYB98                    --------->ARR11(3)     <---------ARR14(2) ------->ZAT14      <---------TOE2(2)                ---------->DOF2        <-------MYC3           -- >ARR10   --------->AHL20(2)              ------->TEIL   <---------ARR11(3) ------->MYC3        -----   ctacactaacaaaaaaatttcatatgttaaagaaaacaaatatgaaactaaatcacaaagatcaattggaattagacatgtggatcgactcattagaaaa  22545000  Previous    Next  AGI:  At1g61140.1    Description:  EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ protein binding / zinc ion binding. similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G50410.1); similar to SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT1G11100.1); similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G20010.1); similar to putative ATPase [Oryza sativa (japonica cultiva Range:  from: 22538382    to: 22544515    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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