Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ----------->HVH21         --------->O2--------->ANAC58         <---------O2--------->ANAC58         --------->DEAR3(1)      --------->DEAR3(1)                                                                      -------  ---------->DOF2    --------->ANAC46                                                         ------- ---->ZAT14          --------->bZIP60(2)                                                     <------- -----ZAT18         <---------LBD16                                     <---------ANAC58    --------- -----ZAT14     --------->ARR14(2)                         --------->TOE2(3) --------->At4g35610 ---->ZAT18     <---------ARR14(2)                       <---------ATHB12    <---------At4g35610 ->At4g35610--------->ANAC58               --------->TOE2(3)            <---------ANAC58    <-------GAMYB ---RAV1(1) --------->ANAC58     --------->At4g35610     --------->ICU4 <---------ANAC46    ========= -MYB46(3)------>NtERF2--------->ZAT14     --------->TOE1(3)     <---------ZAT18           <---------MYB46(3)   cacaaacagcgacgacggaatccacggcagtcaccatctgaaaaaccttcattgtggcaaacattagcgcaattgcttgagctcagacatggtccgttga  22495800                       <---------ANAC58                       <---------ANAC58                      <-------TEIL                      <---------DEAR3(1)                    <-----------HVH21                                  --------->TOE2(3)                   <---------O2                                      <---------TOE2(3)          <----                   --------->O2                               <---------AHL20(2)                -----                   <---------TGA1a                            --------->AHL20(2)            ---------                   --------->TGA1a                        <---------ARR11(3)     --------->KAN4(2)                   --------->ANAC58              <---------ICU4     <-----------GT1       ----------- -->WRKY12         --------->ANAC46              --------->ZAT6   <---------AHL20(2)      <---------ANAC55(2) -->WRKY38(1)      --------->ANAC58             <---------ATHB12  --------->AHL20(2)      --------->ANAC55(2) --MYB52(1)      <---------ALFIN1 <---------ANAC58      --------->ANAC58        --------->KAN4(1) >At4g35610    <-----------GT1    <---------ANAC58      --------->ANAC46        <---------KAN4(1) ============================MYC_MYB----------->HVH21   --------->ANAC58      <---------GLK1(2)------   acaagttgctacttgtttcacacgtccgtgcctctaccgtgaccagacccatcactacaagacattaattaaacgttatagattattcgaacatgtaatt  22495900                   --------->At4g35610                                                              -                --------->HSFC1(2)                                                                  <     <---------ANAC58                                            --------->ARR14(2)                 - -----AHL20(2)  <---------HSFC1(2)                               <---------ARR14(2)                 < ---->AHL20(2) --------->ANAC58          --------->AHL20(1)   <---------ANAC46                      - >AHL20(2)     --------->ANAC58   --------->TOE2(3)         --------->MYB52(1)--------->YAB1        < >GT1<---------ANAC58        --------->YAB1                ----------->HVH21------->TEIL           -- --->ICU4  --------->ANAC46 <---------YAB1       --------->TOE2(3)--------->GLK1(1)          --------   aatatgggcttatccacaagcttctgcataatcatacatcaaatatgttaaccaaaatacaatgacggataccatatgtatcatattatgtagacttgca  22496000             <---------ICU4                                                         --------->YAB1             --------->ATHB12                                                      ==================            <---------YAB1                                                         <------ZmHOX2a(2)   <---------AHL20(2)                                                             --------->ARR11(3) -------->AHL20(1)                                                                <---------ARR11(3) ---------AHL20(1)                                                             --------->ANAC58 -------->ARR11(3)                                  <---------ICU4             --------->ANAC58 ---------AHL20(2)                                 --------->ICU4       <-----------RAV1(1) -------->AHL20(2)                                 <---------YAB1     ----------->RAV1(2) ---------ARR11(3)--------->ANAC55(2)            --------->YAB1      --------->GLK1(2) ------->AHL20(2) <---------ANAC55(2)          ------->TEIL          ------->TEIL--------->YAB1 ->AtLEC2 <---------At4g35610       <---------AHL20(2)              --------->ARR11(3)          <----   aatatattatgtagatgattacatgttgacatgagtttttatttagatgtatcatgatggtatgaattaagaacctgtggcaaggatcatgaacaatagg  22496100                                                                                            ---------                                                                                     ----------->GT1                                                                                   ---------->DOF2---                        --------->ARR11(3)                                     <------ZmHOX2a(1)  --- ==HOX2a_HOX2a          <---------ARR11(3)              --------->DAG2       <---------TOE1(3)    <-- --ZmHOX2a(1)      <------ZmHOX2a(1)                   ---------->DOF2       <---------TOE2(3)-------   agaagggctgagttcaaacgaggagagaccttcattttttaagagagagtttggacaaaaagtgttttgaagagctattaaggaagaaagtgaaacttaa  22496200                                                     <---------ANAC46       *TSS                                          <---------ANAC58     <------ZmHOX2a(1)                        <-----------RAV1(1)                    <---------WRKY18(1) >TOE2(3)----------->GT1                <---------AHL20(2)                      <---------MYB46(3) ------>AHL20(2)                       --------->AHL20(2)                      <--------P------------ ------>YAB1          --------->YAB1   <---------AHL20(2)                    <---------MYB46(3) -------AHL20(2)     <---------YAB1 <---------AHL20(2)                      --------->ALFIN1 -->AHL20(2)  <------------CBF     --------->AHL20(2)<---------ANAC58       <---------AtMYB61   ttatataggaactgaaaattgatatgataagagactatttattaattcatgttggacgtgtttttgttatcagatagagtggttgtttgaccacaatatc  22496300                                                                                                   <-                                                                                      <---------YAB1                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                     <---------AHL20(1)                                                                                     --------->AHL20(1)            <---------ANAC58                                          --------->AHL20(2)           --            ----------------------->TaNAC69(2)                        <---------AHL20(1)  --------->YAB1            <---------ANAC58       <-------GAMYB         <------MYB83 --------->AHL20(1)  <---------AHL20(2)       <---------TOE1(2)          <---------MYB46(3)     <------MYB46(1)             --------->AHL20(2)  <---------ARR11(1)           <----------DOF2     <---------AHL20(2) <---------AHL20(2)  --------->AHL20(2) <---------MYB52(1)      --------->ANAC55(2)      --------->AHL20(2) <---------AHL20(2)  <---------YAB1 >CBF<----------DOF2   <-----------GT1         --------->YAB1        --------->AHL20(2)--------->YAB1   gccgtttctttggttcttgctctattcacgtttctttggttgtaaacaaatataaaatttggtttatgaaattaaattttggcagaatataattatatat  22496400                                --------->AHL20(2)                        ----------->GT1                   <---------AHL20(2)                  --------->AHL20(2)               --------->GLK1(2)                        <--------                 <---------YAB1 <---------AHL20(2) --------->ARR14(2)              <---------------AGL15 ------TEIL   <---------YAB1   <---------AHL20(2)  <---------ARR14(2)              ================== ----->TEIL<---------YAB1      --------->ICU4   --------->YAB1    <-----------RAV1(1)       ---------   gtacatgtgaatgaagattattaaaaatgtgaaattatttagtgacacaatagtatctgtgtatttcgatgtggcattgaaggtgctaaatgaagacatt  22496500                        ----------->GT1                                          --------->ARR11(3)                      ---------->DOF2                                  ----------->RAV1(1)<---------WRKY18(1)                  ---------->DOF2                            <---------------AGL15      <---------WOX13(1)      =======================================================================MADS_MADS <---------ANAC58      --------------->AGL15                  ------->GAMYB   --------------->AGL15     <---------AtLEC2      <---------------AGL15           <---------AHL20(1)    <-----------------AGL1     <---------ANAC58 -ARR11(3)   ----------->GT1          --------->AHL20(1)    --------->ANAC55(2)  <---------ARR11(3) =====================MADS_MADS --------->TOE2(3)           <---------ANAC55(2)--------->DAG2     --- >ARR11(3) ---------->DOF2      <----------DOF2           <-----------GT1    ---------->DOF2    -----   ttagtttacaaataaaagttaaaagaaagaaaaactttaatatataacagcaaaacaatattacatattgtggcaacacaaaaggtcttgcttgacttaa  22496600                                         <---------ZAT2                                         <---------At4g35610                                         --------->At4g35610                                 --------->ARR14(2)                                 <---------ARR14(2)                                 ------->TEIL                                <---------CCA1(2)                           --------->GLK1(2)      ---------->DOF2     <---------GLK1(2)  <-------TEIL        ---------->DOF2    --------->ZAT2                                             - ------>DAG2      --------->ANAC46<---------GLK1(1)                 <---------AHL20(2)    --------->AHL20(2) ----->DOF2<---------DAG2 --------->ARR11(3)       ------->TEIL ------>ZmHOX2a(1)      --------->YAB1   aaggttcttaaagccttttcactcaaaagattctgtatctccgagctcccatgaaacttctaaatcctatttttttgagggagactcaaaaattatacac  22496700  Previous    Next  AGI:  At1g61070.1    Description:  LCR66/PDF2.4 (Low-molecular-weight cysteine-rich 66). Identical to Low-molecular-weight cysteine-rich protein LCR66 precursor (LCR66) [Arabidopsis Thaliana] (GB:Q9C947;GB:Q1PFI2); similar to LCR68/PDF2.3 (Low-molecular-weight cysteine-rich 68), protease inhibitor [Arabidopsis thaliana] (TAIR:AT2G02130.1); similar to LCR69/PDF2.2 (Low-molecular-weight cysteine-rich 69), protease inhibitor [Arabidopsis thaliana] (TAIR:AT2G02100.1); similar to protease inhibitor II (GB:AAA91049.1); contains InterPro domain Gamma Purothionin; (InterPro:IPR008177); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (Int Range:  from: 22495398    to: 22496207    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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