Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->YAB1                                              <---------GLK1(1)  --------->TOE2(3)                              ----------->HVH21                            ------- ---------DOF2                                  <-----------HVH21                 <--------ATHB1 ->MYB46(3)        <-----------------AGL1      ------>ZmHOX2a(1)                  <---------ICU4 --GT1         --------->KAN4(2)             ----------->RAV1(2)       <---------ALFIN1      <------ZmHOX2a(2)   tctttcttaatctcgtttattctcagtttgggcaatgctaaaaactctcctgtgatgggattagaaatcaccagcactcttgaataattctttcgatcat  22493000                                                                                     <---------O2                                                                                     <---------ANAC58                                                                                     <---------TGA1a                                                                                     <---------ANAC58                                                                                     --------->O2                                                                                     --------->TGA1a                                                                          <------NtERF2                                                                         <---------MYB46(3)                           <------ZmHOX2a(1)                             <---------ATERF1(1)                        <------ZmHOX2a(1)                               --------->ALFIN1                ------>NtERF2                                           <---------DEAR3(1)                --------->LBD16                                       --------->ALFIN1               --------->ANAC46                                  <---------REM1(1)   <---------ANAC55(1)            --------->ARR14(2)                                   <---------YAB1      <---------ANAC46  --------->ANAC46   <-----------RAV1(2) <---------ZAT14       --------->YAB1        <---------ANAC55(2)  --------->ANAC58 ----------->RAV1(1)   --------->ZAT14      <---------ATHB12       --------->ANAC55(2)  --------->ANAC58 ------>NtERF2    <---------YAB1            <---------YAB1        <---------------- -->YAB1    <---------ARR14(2) ----------->GT1              ------>ZmHOX2a(1)   --------->ANAC46   gttcaagacataacaatccgccaacaggaggacttgttataagtaaactgtttccacttgtcctatgatgaagggtggctacaagagacgtgttctcatc  22493100                                                                        <---------PCF2                                                                        --------->TCP20                                                                       <------NtERF2                                                                      --------->ABI4(2)                                                                      <---------MYB46(3)                                                                     --------->ALFIN1                                                                 --------->LBD16                                                                 <---------LBD16        --------->HSFB2a(2)                                                               <---------LBD16          <---------HSFB2a(2)                 <-----------------------TaNAC69(2)            ------>ZmHOX2a(2)       <---------LBD16               ----------->HVH21                              <------ZmHOX2a(2)        ------>ZmHOX2a(2)             --------->At4g35610                             <---------ARR14(2)    <---------YAB1             <---------ANAC46   -------->P                   --------->ARR14(2)    ----------->HVH21    <---------ANAC58          --------->MYB46(3)            ==================================HOX2a_HOX2a    <---------ANAC58--------->ALFIN1               ----------->GT1<---------DEAR3(1)--------->ATHB12 -------TaNAC69(2)<---------ANAC46        <----------DOF2   <------ZmHOX2a(1)      --------->ICU4   agggtttcgaggctgaggtgaagtgtagaagaacaacccttctgcattttcgatggtgaaaaggatccgcggtggggctggagacatgatcgggaacaac  22493200                                                 ------->GAMYB                           ------>ZmHOX2a(2)                                                --------->ANAC58                        <------ZmHOX2a(2)                                                --------->MYB46(3)                     <---------ARR14(3)                                                --------->ANAC46                       --------->ARR11(3)                                                --------->bZIP60(2)                    --------->ARR14(3)                                                --------->ANAC58                       <-----------ARR10                                              --------->MYB52(1)                       <---------ARR14(2)                                           --------->ANAC58                            <---------ARR11(3)                                           --------->ANAC55(2)                         --------->ARR14(2)                                           --------->ANAC58                  --------->ARR14(2)                                           --------->ANAC55(1)               <---------ARR14(2)   ---                                           <---------ANAC55(2)          ------------>AtMYB77      <--                                      ----------->ARR10            --------->ZAT14     --------->AGP1                             <---------YAB1--------->ANAC46        <---------ZAT14     <---------AGP1 ----------->GT1  ------->TEIL      <----------DOF2                --------->ZAT18   ----------->ARR10   atgttgtaatatggacgacgaatttgtgatgaccatagctttgatacgcaacgacactgagctatagacttcactggcagtttcgacaagatcttagcag  22493300                                        <---------ATERF1(1)                                        <---------SPL7                                     <---------WRKY12     <------ZmHOX2a(2)              <---------ANAC46              <---------MYB46(3)     <-----------HVH21    <---------ARR11(3)              <---------ANAC58   --------->ZAT18                  ----------->GT1    --------->ARR11(3)              <---------ANAC58   <---------ZAT18    --------->At5g28300 ------>ZAT14                    <---------MYB52(1)--------->ALFIN1  <-------TEIL    ---------->DOF2 -------ZAT14               --------->GLK1(2) --------->LBD16 <---------YAB1       <------ZmHOX2a(2)   tgaagagatcaacatggatagcatcaaaataatctgtttcgtcgtccccagaggttgtggacttctgatggttcatggtgaatggatcaaaggtcaaatg  22493400                                                                                            <--------                                                                                            ---------                                                                                    --------->AHL20(1)                                                                                    <---------ARR11(3)                                                                                    <---------AHL20(1)                                                                                    --------->ARR11(3)                                              <---------AHL20(2)                   --------->CCA1(1)                                              --------->YAB1                       --------->RVE1(1)                                            <-----------TBP                    --------->AHL20(2)                                     <----------DOF2   <---------MYB46(3)    ----------->GT1<-------- <---------------AGL15         ------------>CBF       <--------P        ---------->DOF2<----------DOF2   gttctatttctagtggctgtttttttttgtgagttcaatcttttatatttataagggttgatgagttttttttttaaagaagtaaatatctttagatttt  22493500        <---------AHL20(1)        --------->AHL20(1)                                                                    <------        --------->ARR11(3)                                                          <---------CCA1(1)       <---------AHL20(2)                                                           <---------RVE1(1)   ----------->TBP                                                                 <---------ARR11(3)   --------->AHL20(2)                                                              --------->ARR11(3)   <---------AHL20(2)                 <----------DOF2                             --------->YAB1 ----------->TBP      <---------TOE2(3)                               --------->AHL20(2)    <------ZmHOX2a(1) -GLK1(2)        --------->YAB1 --------->bZIP60(1)                   <---------YAB1<---------------AGL15 >ARR11(3)       <--------HAHB4 <---------bZIP60(1)           <-----------GT1    <---------YAB1 -ARR11(3)      <---------YAB1  <---------bZIP60(2)------>ZmHOX2a(1)  <---------AHL20(2)  <---------TOE2(3)   cttatataaatattttgtatcattaagtttaatgacatcgcttttgtttaatcctcttccagtttatcagttttaattagataatgatattttaggaaat  22493600                  --------->ARR11(3)                  <---------ARR14(3)                  <---------ARR14(2)                  <---------ARR11(3)                  --------->ARR14(3)                  --------->ARR14(2)                                          ---------->DOF2                  <---------GLK1(2)                                        --------->TOE2(3)     <---         <---------YAB1                       <----------DOF2         ------>ZmHOX2a(1)          <---      <---------TOE2(3)                   <---------GLK1(2)           <----------DOF2--------->At4g35610    <---------AHL20(2)            ------->TEIL<---------DAG2     <---------CCA1(2)   <---------At4g35610 ---GLK1(1)<------------CBF    <---------ATHB12    <-----------GT1   --------->TOE2(3)        <------   tcgaaattaatgttattgaagattttctatcaaatgaatttttagatactttttatctaaacattttgtatcctttaacttaatgccatctgatttatgc  22493700                       <------MYB46(1)                       <------MYB83                      --------->MYB59                      <---------TOE2(3)                      --------->MYB111(1)                      --------->MYB46(2)                 --------->AHL20(2)                                                              <---       <---------AHL20(1)                                                                    --------       <---------AHL20(2)                     --------->AHL20(2)                     ----------->GT1       --------->AHL20(1)      <---------CCA1(1)                                     <---------MYB46(3)       --------->AHL20(2)     <---------ARR11(3)                                 <---------AHL20(2)       --------->ARR11(3)     --------->ARR11(3)                                 --------->ATHB12----       <---------ARR11(3)   <---------ZAT6    <---------AHL20(2)                --------->AHL20(1) <-----------GT1 <---------YAB1<---------RVE1(1)                                <---------AHL20(1) -------DOF2     <---------AHL20(2)  <---------ANAC46               --------->AHL20(2)    <---------YAB1 ------DAG2     --------->AHL20(2)   <---------ANAC58       ----------->GT1     <---------AHL20(2)--- ---YAB1        <---------AHL20(2)   <---------ANAC58       --------->YAB1      --------->AHL20(2)<--   tttttccaatatattgattttaattaggtagagatattttcgtattttttaaataggtgtaattgtaaatttttatatcaaatttattggttataatttt  22493800                                                                                         <---------AHL20(2)          <---------YAB1                                                                 --------->AHL20(2)     <---------ZAT6                                         ----------->HVH21     --------->AHL20(2) ------AHL20(2)    <---------AHL20(2)                     <----------DOF2         --------->ICU4<---- ->ICU4<---------YAB1                           --------->AHL20(2)                <---------AHL20(2) ----->AHL20(2)   --------->AHL20(2)            <---------AHL20(2)      ---------->DOF2 --------->AHL20(2) ------>AHL20(2)--------->ARR11(3)             <---------AHL20(2) <------ZmHOX2a(1)--------->AHL20(2) -------AHL20(2)<---------ARR11(3)             --------->AHL20(2)----------->GT1  <---------ATHB51   taaattagtgttattgtagattttatatcacatttattgtttagagtttttaaattagttctttgacaggaaaaaaaagaagaaataattttaaattagt  22493900  Previous    Next  AGI:  At1g61060.1    Description:  F-box family protein. Identical to Putative F-box protein At1g61060 [Arabidopsis Thaliana] (GB:Q9C948); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G53815.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 22492213    to: 22493376    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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