Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------------AGL15                                                                         --------------->AGL15               <---------At4g35610              ----------->GT1     ------>ZmHOX2a(1)               --------->At4g35610        ------>ZmHOX2a(1)         <----------DOF2         --------->At4g35610     --------->At4g35610        --------->REM1(1)   tctacagaattagcttaagctccacaattcatatcagattactcctaacacagaaaaatgctacatcatccttttcaaattgtagtatctcagacttaaa  22474000                                                                                               ------                                                                                               ------                                                                                              <------                                                                                      --------->At4g35610                                                                                      --------->ZAT2                                                          <------ZmHOX2a(1)           <---------At4g35610                       --------->ANAC58                 <---------TOE2(3)          ----------->RAV1(2)                       --------->ANAC58               ---------->DOF2              <---------ANAC58                    ---------->DOF2                  <---------AHL20(2)            <---------ANAC58          --------->bZIP60(1)                        --------->AHL20(2)          <-----------GT1          <---------bZIP60(1)  --------->ZAT18   --------->AHL20(2)           <---------ICU4---------   atttcaacaatgaagtcattaacaaaggcaatttgcactaaaaacgacctataaattaaaggattcaatacgagagtcaaaaattacctgctgaacataa  22474100                                                                                         ------>ZmHOX2a(2)                                                                                         ============                                                                                        =============                                                                                        <------ZmHOX2a(2)                                                                                        --------->CCA1(2)                                                                                       <---------ARR14(2)                                                                                       <---------AGP1                                                                                       --------->AGP1                                                                                       --------->ARR14(3)                                                                                       <---------ARR14(3)                                                                                       --------->ARR11(3)    <-------TEIL                                                                       --------->ARR14(2) <---------ANAC58                                                                      <---------ARR11(3) <---------ANAC58          ---------->DOF2           <---------ZAT14            <---------ANAC58 <---------ANAC46   <-------TEIL                     <---------ARR14(2)         <---------ANAC46 --->ATHB51        --------->CCA1(2)                 --------->ARR14(2)         <---------ANAC58 --->ATHB12       <---------ARR14(2)                 --------->ZAT14      --------->ATHB12 ---YAB1          --------->ARR14(2)            <--------P         --------->TOE2(3) ----------->ARR10 >YAB1           <------ZmHOX2a(1)            ----------->GT1--------->ANAC46  ---------->ID1   ttggcgtgcataacaacgaggatacagaacaaagtgatggcaacgaagaggtaagtatactctaagaaacctctaatccttggcgttaagatctgcgaaa  22474200                                              ------>ZmHOX2a(2)                                             <---------GLK1(1)                                             --------->GLK1(1)                                            <-----------ARR10                                 <-------TEIL<------ZmHOX2a(2)                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR14(2)        <----------DOF2                               --------->ARR14(2)        <---------DAG2          --------->TOE2(3)  --------->LBD16--------->ARR11(3)        ------->TEIL       <---------LBD16  <---------ARR14(2)     ------>ZmHOX2a(1)  --------->ZAT2      --------->ARR14(2)                    <---------ANAC55(2)     ===================================HOX2a_HOX2a  <---------ZAT18         --------->ZAT6     ==================================HOX2a_HOX2a--------->At4g35610    --------->DOF5.7(2)   ----------->RAV1(2)  <---------ZAT2  <---------LBD16------->TEIL     --------->TOE2(3) ===========HOX2a_HOX2a --------->At4g35610 <---------ARR11(3)  ---------->ID1    --------->ANAC55(2) ===========HOX2a_HOX2a <---------At4g35610<---------CCA1(2) ---------->ID1<---------DOF5.7(2)   acctctcctgaaccctaataaacgtctgctccggatccatatttcggatctccgatgcactttttcgtcttcttcgttaacactacgtagtcatcgaatt  22474300                         <---------GLK1(1)                      <---------TOE1(2)                   ----------->GT1                   ------>ZmHOX2a(2)                 --------->ARR14(2)                 <---------ARR14(2)                                                              ----                 <---------ARR11(3)                                                         <--------                <------ZmHOX2a(1)                                                   ---------->DOF2            <---------ANAC46                        <---------ARR14(2)           *TSS      --------->ANAC58            <---------ANAC58          <---------HSFB2a(2)                       <---------WOX13(1)            <---------ANAC58          --------->HSFB2a(2)                     --------->ATHB12  -----         <---------MYB52(1)    <-----------------AGL1    --------->ANAC46    <---------YAB1--------->ANAC58        <-------GAMYB <---------TOE2(2)             --------->ARR14(2)    --------->ICU4 ---------->DOF2   tgaattgctccgttgcgaggatcgtagatttcttctcgttctgggagattgtcgaatccacagaaattgaagagtgaagatgattgaaaagaaaagcacc  22474400                                                                          <------------CBF                                                                        <------NtERF2               < --------->ANAC58           <---------AHL20(2)                         ------------>CBF    --------->ARR14(2) --------->ANAC58       ----------->GT1                               <---------ANAC46     <---------GLK1(2) ----->LBD16          <---------At4g35610 <<<<<<<<<<GT-3b             ----------------->AGL1        < -ABI4(2) <-----------GT1<-------GAMYB<---------AHL20(2)           --------->ALFIN1       <------ZmHOX2a(1) ---->DEAR3(1) <----------DOF2<------------CBF               <---------ZAT6     ---------->DOF2<-----   gcgaagcaaattttacactttgtttgctgttaaattgtttttatttttcttcaaaaatccctagtgagagtggcgcaattgggaaagcgataggattctt  22474500       <------ZmHOX2a(1)               --------->DAG2     --------->LBD16                  ---------->DOF2    <---------HSFB2a(2)            --------->YAB1    --------->HSFB2a(2)            --------->TOE1(3) ---------ANAC58                   --------->TOE2(3)                                  <-----------GT1 ---------ANAC58             --------->ANAC46                                     --------->YAB1 -----DOF2                --------->REM1(1)                  <---------AHL20(2)<----------DOF2   ttgcttccaggacaagagttcgattccttcaacacaaccataaagctctcattttctcttcattttttttctgttaacattcttttataaactacttcaa  22474600            --------->AtLEC2          --------------->AGL15          <---------------AGL15          <---------AtLEC2 --------->ANAC46                                  --------->YAB1               <-----------GT1 --------->ANAC58       --------->YAB1  <----------DOF2                   <---------GLK1(2) --------->ANAC58      <-------TEIL     --------->TOE2(3)  <------ZmHOX2a(1) --------->TOE2(3)   tacatgccatttccatgaagagaaattcataacattttccaactttaatacaatcacaagaggaatttagtagtcaaattcttaaccatttgcagagaaa  22474700                                                                                        ------>NtERF2                                                        <----------DOF2    --------->ANAC58                                                        ------>ZmHOX2a(1)  --------->ANAC58                                                 <---------ANAC58       <---------ARR14(2)   --------                                                 <---------ANAC58       --------->ARR14(2)<---------ANAC46                                               ------>MYB46(1)     <------MYB46(1)     <---------ALFIN1                                               ------>MYB83     <---------ANAC58    --------->ANAC58                                      ------->TEIL   ---------->ID1<------MYB83     --------->ANAC58                        --------->TOE1(3)  <---------ARR11(3)   <---------ANAC46    --------->ANAC46    <---------ICU4      --------->TOE2(3)  --------->ARR11(3)   <---------ANAC58--------->MYB46(3)---   atgtgctcattacaatctctcgtctaccttaatttagatgaatcagaccttccttgtcctttagaggcttggtagaaacgcatcaaacgacaccgtgtat  22474800                                                    <---------HSFB2a(2)                       --------->ANAC58             --------->HSFB2a(2)                       --------->ANAC58          <---------ARR14(2)   ------->TEIL    --------->ANAC58              --------->ARR14(2)        <-----------GT1 ->REM1(2)         --------->ANAC58              --------->GLK1(2)    <----------DOF2     <----------DOF2 ------>YAB1     ---------->DOF2                <---------GLK1(2)     <---------DAG2<---------GLK1(1)   tcatgaaactgcaaatatcaaaagcaaggctcactaatatgtcttacagagaatctggaagaaccctagtagctttttaactttggaaacctctttaact  22474900  Previous    Next  AGI:  At1g60995.1    Description:  similar to S3 self-incompatibility locus-linked pollen 3.15 protein [Petunia integrifolia subsp. inflata] (GB:AAQ09996.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24675.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83928.1); contains domain PTHR21650:SF4 (PTHR21650:SF4); contains domain PTHR21650 (PTHR21650) Range:  from: 22469305    to: 22474381    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g61000.1    Description:  similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT1G64330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24685.1); contains InterPro domain Nuf2; (InterPro:IPR005549) Range:  from: 22474589    to: 22477770    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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