Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------GLK1(1)                                               <----------DOF2               --------->YAB1              ----------->GT1         --------->ANAC58             --------->ANAC58           --------->TOE2(3)          --------->ANAC58          <---------ATHB12           <-----------GT1    ------>MYB83 --------->ARR11(3)    <-----------GT1               <---------ICU4        ------>MYB46(1)    <---------ANAC58 --ZmHOX2a(1)--------->ANAC58 --------->AHL20(2)      --------->TOE1(2)    <---------ANAC58         -   accatttaacaaatcaagcatatcagagcaaattcaatattacattagtaaataaacctagcaatggataagaaattgcgagactttgaatcaaatcaca  22450500                                                 <---------ZAT6 --------->TOE1(2)                                                 --------->ALFIN1                      ==============                                           <---------------------WRI1      <----------DOF2                     <----------DOF2     ----------->HVH21      --------->TOE2(2)      ------>ZmHOX2a(2)                    --------->TOE2(3)    --------->WRKY12      ----------->RAV1(2)   <---------ARR14(2) --------->DOF2   ------->TEIL   --------->AHL20(2)           --------->MYB52(1)     --------->ARR14(2)   tgtaaagacatcaaaatatgaacctttaagtcaaatgaaatagttgacgaagtgttcgatgaaatacctgagagagactttgtttctgatccgaacaagt  22450600                                                                                               <-----                                                                                             --------                      <---------MYB59                                                       <--------               ---------->DOF2                                   ------->GAMYB      --------->YAB1    <---------ARR14(2)<---------------AGL15                     <---------MYB52(2) <<<<<<<<<ARR2 ----    --------->ARR14(2)--------------->AGL15                     --------->MYB46(3) <---------ATHB12   <------ZmHOX2a(1)------->TEIL                        --------->YAB1           --------->WOX13(1) =========HOX2a_HOX2a --------->TOE2(3)  --------->GLK1(2)   <----------ID1--------->YAB1--------->GLK1(2)   atagaggaaccagtttccaaagaacctaaataagaaaacccagaatcagtttcggtaatcaaaacaacaaacttcaatcgaaacaatcaaaattctgatt  22450700                                                                              --------->ANAC46                                                                              --------->ANAC58                                                 <---------YAB1          <---------ARR14(2)                                               --------->YAB1            <---------GLK1(2)                                              <------ZmHOX2a(2)          --------->ARR14(2)                                              =================================HOX2a_HOX2a                                             <---------ARR11(3)         <------ZmHOX2a(1)                                             --------->ARR11(3)       <---------TOE2(2)                                         <---------LBD16              <---------TOE1(2)     ------->TEIL                       <---------LBD16           <---------TOE2(3) ----WOX13(1)                           ------>ZmHOX2a(1)  ----------->GT1    --------->ANAC58 ------ ->ATHB12                               =============HOX2a_HOX2a --------->MYB52(1)            ------ -YAB1                            <---------ARR11(3) --------->DAG2 --------->TOE2(2) --------->LBD16 ----->ATHB12                     --------->ARR11(3)---------->DOF2 --------->TOE1(2)----------->GT1-   gattacgaacatcgacgaagaacatttggggtctaagatgtcctcgggatcatgaaaagtgaagaaataacgtaggattctcgcaatccgaaaaaacacg  22450800                                                                                  <---------ETT(2)                                                                                  --------->ETT(2)                                                                                  <<<<<<<<<<bZIP23                                                                                  <<<<<<<<<<bZIP19                                    <---------YAB1                                >>>>>>>>>>bZIP23                               ----------->RAV1(2)                                >>>>>>>>>>bZIP19                               <---------At4g35610                               --------->DDF1                            <-------TEIL                                       *TSS       <---------AHL20(2)  <------ZmHOX2a(2)                              --------->ANAC58      --------->AHL20(2)  --------->ARR14(2)                              --------->ANAC46      <---------AHL20(2)  <---------ARR14(2)                              --------->ANAC58 --->ANAC58               --------->AGP1             --------->ANAC58     --------->ANAC55(1)    <--- --->ANAC58              --------->At4g35610         --------->ANAC58  <-------TEIL<---------DDF1---- ---------->GT1  --------->GLK1(2)  --------->ICU4 ---------->DOF2    --------->CCA1(2)       <------ZmHOX2a(1)   aatgggaattaaatatgagaatcagacagatccatctgatgatgaaatcagacaaaagcaagttggagaaagatacaagtaatgtcgacatcgtgaggaa  22450900                                                                                 <---------DDF1                                                                                <<<<<<<<<<bZIP19                                                                                >>>>>>>>>>bZIP23                                                                                <<<<<<<<<<bZIP23                                                                  --------->ANAC58                                                      <------------CBF          <---------ETT(2)           --------->MYB52(1)                       <---------ARR14(2)          --------->ETT(2)           --------->CCA1(2)                      --------->LBD16 --------->ANAC55(1)    <-------GAMYB                      <-------TEIL --------->ARR14(2)------>NtERF2    <---------At4g35610                ------------>CBF           --------->ANAC58    --------->At4g35610               --------->CCA1(2)           --------->ANAC46        ---------->ID1 ------HSFC1(2)                      <---------ARR14(2)         <---------ALFIN1>>>>>>>>>>bZIP19 ----->HSFC1(2)  <--------P          --------->ARR14(2) <---------REM1(1)      --------->DDF1   gtttgcagttgagaaacgggttagagtcttggcatagaagatacaattcttccgaatattgtagccacacgccaactaaatgtcgacattttgttgtaat  22451000                                                                                             --------                                                                                         xxxxxxxxxxxx                                                                                        ----------->GT1                                                                                        --------->YAB1                                                                                     <---------AtLEC2                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                               <---------ANAC58                                                        <---------DAG2         <---------ANAC58                                                  <---------ICU4         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              <----------DOF2                  --------->REM1(1) ----------->GT1 xxxxxxxxxxxxxxxxxxxx     <---------AHL20(2)  ----------->GT1<-----------GT1 <----------DOF2  --------->ARR11(3)  <xxxxxxx   ttcattttttattcatcttttttttttgggttaaatacaatattacccttcatcaatactttttggattgtaaaacatattgggtttgaatggtaacaca  22451100                                                                                                 <xxx                                                                                                 ----                                                                                                <xxxx                                                                                                <xxxx                <---------YAB1                                                                 <-----                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                           <xxxxx   <----------DOF2                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ->ZAT6 <-----------GT1                <----------DOF2                     <----------DOF2     ------ xxxxxxxxxxx>smallRNA(l2)     --------->YAB1--------->YAB1 --------->DAG2  <---------DAG2<xxxxxxxxxxx xxx>smallRNA(fl3)         --------->WOX13(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)xxxxxxxxxxxxx xxx>smallRNA(i2)        <---------YAB1<---------DAG2     ---------->DOF2<---------At4g35610  <xxxxxx xxxxxxxxxxxxxxxxsmallRNA(l2)<---------ATHB12     ----------->GT1<-----------GT1       xxxxxxxxxxxxxx   atacacttttgtacagttttgatagttatcaatcataaaaactttatcaaaaacgttacaaaaagttttactctcagctttttttgtagagctcgttcta  22451200                                                                      --------->ATHB51                                                                      --------->ATHB12                                                                  <-------TEIL                                                                 <------ZmHOX2a(2)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     --------->AGP1     xxxxxxxxxxxxxxxx>smallRNA(i)                               <---------ARR14(2)     --------->ZAT18                               <---------MYB46(3)<---------MYB52(1)     <---------ZAT14                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <---------DAG2   --------->ARR14(2) ------>DOF2                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxsmallRNA(le3)               <----------DOF2 --------->At4g35610 xxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ----HSFB2a(2)     --------->DAG2        <-----------GT1     --------->YAB1 xxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------AHL20(2)   <---------ATHB12                    <---- --->HSFB2a(2)    ---------->DOF2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               <---------ICU4 xxxxxxxxxxxxsmallRNA(si3)         --------->AHL20(2)      ------>MYB46(1)                --------->ICU4 xxxxxxxxx>smallRNA(si3)          <---------AHL20(2)       ------>MYB83   <---------AHL20(2)    ----- xxxxxxxxxxxxxxxxxsmallRNA(fl3)   --------->AHL20(1)      --------->WOX13(1)  --------->AHL20(2)----- xxxxxxxxx>smallRNA(s2)           <---------AHL20(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<---------MYB46(3)   aaagttttgcactgttccgataaagctaacatctaaaatatttatacaacttttggttaccaatcagatccattatttgattaaaaaatgtaatggttac  22451300                                                           --------->TOE1(3)                                                           <---------MYB59                                                           --------->TOE2(3)             <---------ARR11(3)                          -------->P             --------->ARR11(3)                          ------>MYB83            <---------CCA1(2)                      --------->ARR14(2)                       <--------ATHB1        ----------->GT1                        --------->DAG2                               ---------      ---------->DOF2         <---------------AGL15<---------ARR14(2)                      <---------ATHB12 -----ANAC55(2)               --------------->AGL15<-----------GT1                 --------->ARR14(2) ---->ANAC55(2) ----------->HVH21    ----------->GT1     ------>MYB46(1)           <---------ARR14(2) ---------->AtSPL3   --------->At4g35610      ---------->DOF2           ---------->ID1     <---------ATHB51   ggtactagtaaagtatatctcacagttgaaaacttgaaatagtaaaaaaaaagtatccctacctaaacccatttggcctattgcaaatttgcaataatac  22451400  Previous    Next  AGI:  At1g60960.1    Description:  IRT3 (Iron regulated transporter 3); cation transmembrane transporter/ metal ion transmembrane transporter. Identical to Fe (IRT3) [Arabidopsis Thaliana] (GB:Q8LE59;GB:Q8W244;GB:Q9C957); similar to ZIP4 (ZINC TRANSPORTER 4 PRECURSOR), cation transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G10970.1); similar to ZIP-like zinc transporter [Thlaspi caerulescens] (GB:AAK69430.1); contains InterPro domain Zinc/iron permease, fungal and plant; (InterPro:IPR004698); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689) Range:  from: 22448975    to: 22450879    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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