Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       --------->TOE2(3)                     <---------ARR11(3)            ----------->GT1--------->STY1(2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <---------ANAC46 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------TOE2(3) --------->ARR11(3)   <---------TOE1(3)<---------CCA1(2)                                   ---------->DOF2   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       <---------YAB1  ----------->GT1   --------->MYB59 --------->ARR11(3)                       <---------TOE2(3)      ---------->DOF2 ------>ATHB12     <---------AHL20(1)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ------ATHB12      <---------ARR11(3)  <---------ARR11(3)   <---------TOE1(3)----------->GT1  <xxxxxx   tgatttaggttttgtggtgaatatatcttagctagcatcaacatattctatcaaacagttttaagattgaaggaaaaagagataaaaaagaagaggtttt  22412700                                         --------->ANAC46                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <---------GLK1(1)                                     --------->CCA1(2)                                     --------->GLK1(1)                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <----------TaMYB80                                    --------->ARR14(2)                                    <---------ARR14(2)                                    ---------->TaMYB80      <---------ANAC58                                    <---------ARR11(3)      <---------ANAC58                                <---------LBD16  <---------ZAT18                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           xxxxxxxxxxxxxxxx>smallRNA(i)   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                         <---------ARR11(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         --------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                ------->TEIL xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                <-------TEIL <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            <---------------AtSPL8 <------ZmHOX2a(1)xxxxxxxxxxxxxxxx>smallRNA(i)                 <---            --------------->AtSPL8 <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <---------ARR11(3)       <----------DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               --------->TOE2(3)    ---- xxxxxxxxxxxxxxxxsmallRNA(le3)  --------->YAB1   --------->ZAT18            <----------DOF2 <--------   catcgtattctttacatgtacattcaacatcttatcaggatatgcgccatgagcacttgttagcttgtcaagttcgaactttaaacaactagttctttac  22412800                                               --------->ICU4      --------->YAB1                           <---------AHL20(2)     <-------TEIL                              --------->AHL20(2) ------->TEIL                      ---------->DOF2                                                 -- <-------TEIL                  --------->At4g35610                            ----------->GT1-------- ------------AtSPL8            <---------At4g35610                        <---------AHL20(2) -------- ----------->AtSPL8       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            --------->AHL20(2) -------- --DOF2              <-----------GT1      ----------->GT1           --------->YAB1 --------->AHL20(2)   atgtacattcatcaactagttttttaccatttgagatgaaagagttgaaaaaattattcaacccattcaattttaaaaaattgaaaaaaatgagcaagtt  22412900                                                       <---------ARR11(3) <----------ID1                       --------->At4g35610                                          -- ------->YAB1                         <---------At4g35610      <------ZmHOX2a(2)                   <- ->ANAC58                   --------->REM1(1)          --------->ARR11(3)                         <-- ->ANAC58               <---------At4g35610           --------->YAB1   <---------DAG2      <--------- --->GT1                --------->At4g35610         <---------WOX13(1) <----------DOF2<----------DOF2   ataacaacaaaatgttcaacttgttcagctacaattttggagatgaataagttgaatgatattcgatccaaaacttttcgactcaatacttttaatccat  22413000                 --------->LBD16                --------->ANAC46              ------>MYB83              ------>MYB46(1)                             --------->ANAC58            --------->AtMYB61                      <---------ARR14(2)            ------->GAMYB                          --------->ARR14(2)                  --------->ICU4           --------->MYB46(3)                      --------->GLK1(2)                   <---------YAB1          --------->ANAC58                     ------->GAMYB                         <---------ICU4          --------->ANAC58           --------->AHL20(2)   --------->ANAC58        --------->YAB1 ------------->AGL15                 <---------AHL20(2) ---------->DOF2     <---------DAG2 --------------AGL15                --------->AHL20(2) ------>ZmHOX2a(1)    <----------DOF2       <-- ---------------AGL1             <------ZmHOX2a(1) <---------ARR11(3)    <-----------GT1       <----- --GT1--------->ANAC46           ----------->GT1  --------->GLK1(1)      <---------AHL20(2)    <-----   tcaattttaggcaaccatccgtagccatacatgtaggattaaattccaacgaaaatcctaaagcaaatgacttaattacttttttcataatgcttattta  22413100                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                       <---------AHL20(2)                        <-----------GT1                --------->AHL20(1)                  <---------                        --------->MYB52(1)             --------->AHL20(2)   <---------TOE2(3)       -       <---------HSFB2a(2) ------->GAMYB       ----------->GT1              --------->MYB59<---------DAG2       --------->HSFB2a(2)<------------MYB.PH3(1) --------->AHL20(2)        <---------TOE1(3)  <----- --------DOF2          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->AHL20(1)          <-----------GT1 ------GT1          <---------TOE2(3)         ----------->GT1        ----------->GT1  <----------DOF2 ----AHL20(2)      ---------->DOF2   *TSS    <---------TOE2(2)    ---------->DOF2     <---------DAG2<   ctttcatttttagaaaaaaactaaagtaacggtcttcatagaaaccataggttaaaataaaataaaataaaaggtttttaggttccaactttacttttta  22413200         --------->ATHB12         <---------ICU4         --------->YAB1                   <---------ARR14(2)         <--------HAHB4                   --------->ARR14(2)        <---------ATHB12                 <---------CCA1(2)       ------>MYB83                      <---------GLK1(1)       ------>MYB46(1)                 --------->ANAC55(2)  --------->ANAC58                     <---------ANAC55(2)  <-----------GT1  --------->ANAC46             <-----------HVH21          <----------DOF2  --------->ANAC58            <---------ANAC58      --------->At5g28300 -DOF2--------->WOX13(1)      <---------ANAC46     ------->GAMYB             --------->ATHB51 -------->ANAC46              <----------ID1 --------->ANAC46               <---------YAB1 ------GT1                    <---------ANAC58  --------->MYB52(1)         --------->TOE2(3)     ---- ---------ALFIN1  <----------DOF2     <-------TEIL ----------->GT1  ------>NtERF2      <---------ALFIN1   ccacacaccaatcatttcaacttttgacaattgcgtcaaatacatatccccaacggtaaactttactctctgccttacattattgtcatccacttgttgc  22413300                                                                                               ------                                                                                               <-----                                                                                               <-----                  --------->ATHB12                                                           --------                --------->GLK1(2)                                                            --------      --------->ANAC46                                                                     <---------ALFIN1    <---------ALFIN1    <---------GLK1(2)      <<<<<<<<<TBF1       --------->AtMYB61    <-----------GT1 ------>DOF2   --------->YAB1       --------->YAB1       --------->YAB1        --------->At4g35610   aaagttccacattacaagaatcattcgattctcttctatcatcatcttcttcttctccatcaaaattcaccaaaacatggaagctctaattcaccacttc  22413400                                                                                                   --                                                                                                   <-                       --------->ETT(2)                                                            <-    ==============HOX2a_HOX2a                                                                      --    ------>ZmHOX2a(1)  <---------ETT(2)                                                    <---------ANAC58 --->ZAT14      <---------ARR11(3)                                   <----------DOF2       <---------ANAC58 ----ZAT14      --------->ARR11(3)                             <---------ANAC58        ---------->DOF2 ----ZAT18 <------ZmHOX2a(2)                                   <---------ANAC58  <-------TEIL      <- ->ANAC46  <---------ATHB12                     --------->GLK1(2)<---------CCA1(2)  --------->AtLEC2 ->bZIP60(2)---------->DOF2     --------->TOE1(2)     <------ZmHOX2a(1)     <---------------------WRI1   actctcctctccgatcaagctcttgtcgacaaaacattcgacccttcaagaatcgaggacctcatgcgtctctttgaagtcgattcatacaaagcttggg  22413500       <---------ARR14(2)                            ---------->DOF2       --------->GLK1(2)                            <---------MYB52(1)       --------->ARR14(2)                           ----------->HVH21   <---------HSFB2a(2)                            <---------ANAC46   --------->HSFB2a(2)             <---------At4g35610  <---------At4g35610 ------->ZAT2           --------->ARR11(3) <-----------ARR10                                      <-- -----NtERF2 ---------->DOF2       --------->At4g35610  --------->At4g35610                   <------ --------At4g35610      <---------ARR11(3) --------->GLK1(2)                                  <------ ------->At4g35610----------->RAV1(1)     <---------GLK1(2)                ----------->GT1<----------DOF2 --------ZAT2--------->SPL7       --------->GLK1(2)--------->LBD16        ------>ZmHOX2a(2)   <------   cagctctcgaatccgaacagcaacaagaactcgaagaagctgaagaatctctccgtgaagctgaacttgaacttgatcggtaacattttcgtcttttctt  22413600  Previous    Next  AGI:  At1g60870.1    Description:  MEE9 (maternal effect embryo arrest 9). similar to hypothetical protein MtrDRAFT_AC155889g19v2 [Medicago truncatula] (GB:ABN08291.1) Range:  from: 22413137    to: 22414319    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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