Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ------>MYB83                                                     ------>MYB46(1)                                                   <---------MYB55(2)                                                   <---------MYB111(2)                                                   --------->MYB46(3)          <---------ATHB12                         <---------MYB111(1)         --------->ANAC58                          <---------ALFIN1        --------->WOX13(1)                         --------->AtMYB61     --------->ANAC58                             --------->MYB46(3)      <---------ARR11(3)     --------->ANAC58                            ------>MYB46(1)          --------->ARR14(2)   ---------->DOF2                               ------>MYB83  <-----------GT1 ------------>AGL15                             --------->ANAC46          <---------ARR14(2) ->ARR14(2)                                    --------->MYB46(3)        <---------CCA1(2) --ARR14(2)    <----------DOF2                --------->DEAR3(2)      ----------------->AGL1 -CCA1(2)--------->ANAC58               ---------->DOF2      <-----------GT1                  <------   cttcttaaagcaatcaactttggtctgaacaaaaacaagtttcaaagaacccaccaactcatttttctctctcccatatctgaaaaaaaaacttagcttt  22390700                                                              --------->ANAC58                                                              --------->ANAC58                                                              --------->ANAC46<----------DOF2                                                            <-----------------AGL1                                                            ----------------->AGL1                     <----------DOF2    <---------------AGL15<---------HSFB2a(2)    <----------DOF2 ====================================MADS_MADS     --------->ARR14(2)    <---------DAG2  <-----------------AGL3        --------->WOX13(1)  <---------ARR14(2) ----DOF2 <<<<<<<<<TBF1                 --------------->AGL15--------->HSFB2a(2)                  ---   tgtctacttttcttcttctctgtctttatttagacacagaaactaatttgagcaatccattttccagcaatggaacctctctttctctgtgatttcaatt  22390800                                                             ---------->DOF2                                                       --------->At4g35610                                                       --------->ZAT2                                                       <---------ZAT2         ---------->DOF2                               <---------At4g35610    ----------->GT1                           --------->ANAC58               <---------AtLEC2 ------->DOF2                                 --------->ANAC58        --------->GLK1(2)   caaaggaagtaaaaaggagaagaccccaattgaaaaatgacgacttgcaagttactcagcttagaaagagagaatttttgaatgaagaaacgattaagag  22390900                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                       --------->LBD16                                                                      --------->HSFB2a(2)                                                                      <---------HSFB2a(2)                                                                     <---------LBD16                                                                 <---------HSFC1(2)            ------                                                                 --------->HSFB2a(1)        ---------                                                                <-----------ARR10------>MYB83 <------                 ----------->HVH21                              <---------KAN4(2)--------->AtLEC2             <---------ZAT2                              --------->REM1(2)       ------>MYB46(1)             --------->ZAT2                        --------->DAG2--------->HSFC1(2)--------->YAB1   -             --------->At4g35610                  ---------->DOF2<---------HSFB2a(1)        ---------  ------->TEIL ----------->GT1       ----------->GT1     <---------ZAT14--------->LBD16   ---------->DOF2   aatgaatgctaaacgagctgtgacaagagatagagaagagagagaaaactctaaaagtgtgaagagaattttcccgagaaaccaagcaaaacaaaagcac  22391000                                    ----------->GT1                                   ------>ZmHOX2a(2)                                  --------->CCA1(2)                                  <------ZmHOX2a(2)                                  --------->At4g35610                                 <---------AGP1                                 <---------ARR14(2)                                 --------->AGP1--------->DAG2                                 <---------ARR11(3)                                 --------->ARR11(3) ----->RAV1(1)                   --------->ARR14(2) >ANAC58                        <---------GLK1(1)            --------->ICU4 ----ID1                    ==============HOX2a_HOX2a   <---------ANAC58 --------->DOF2             ------>ZmHOX2a(1) ---------->DOF2<---------YAB1     <----------DOF2 >ANAC58 ---------->DOF2    =============HOX2a_HOX2a    <---------ANAC58--------->YAB1         <-----   caaaatgctctgaaagtctgagaaattttcctagagatctgaaaaaaaaaaagctattgagtgatgagtgatactaatagtgcttcttggtttatatttt  22391100                                                                                           --------->ANAC58     <---------AHL20(2)                                      <---------AHL20(2)            --------->ANAC58     --------->AHL20(2)                                      --------->AHL20(2)<---------ANAC58   --------->ICU4                   <-----------GT1          <---------ICU4    <---------ANAC58   <---------YAB1     *TSS <---------YAB1              --------->TOE2(3)<---------TOE2(3)  --------->ANAC46 ----AHL20(2)<----------DOF2 <------------CBF          --------->YAB1 ---------->DOF2      <---------ALFIN1   atatcatttttatgactttggtagtagttgttattgaataactaatctctataacattcttaattttttcaaaaaaggtttgcttctaattccacaccac  22391200                                                                                  <---------YAB1                                                                                --------->YAB1                                                                                <---------ICU4                                                                               --------->ICU4                                                                             <---------ICU4                                                                             --------->YAB1                                              --------->AtMYB61             --------->ICU4                                             --------->MYB46(3)         --------->AHL20(1)         --                                           --------->ANAC46             --------->AHL20(2)         --                                      --------->WOX13(1)           --------->AHL20(2)            <---       <---------ATHB12             <---------ATHB12      ---------->DOF2 --------->YAB1       ------     ------>MYB83                   <---------YAB1   --------->AHL20(2)--------->YAB1        <-------     ------>MYB46(1)  <---------At4g35610  --------->ANAC58        <---------AHL20(2)    ---------->DOF2   <---------MYB59    --------->At4g35610  --------->ANAC58       --------->AHL20(2) ---------->DOF2<   tattaccaaatcatctaatctctcatctgcctactcttatcattcacaccaccaatataaaaaaggaatttaaaaataataatcatgaaaagaaagggac  22391300     --------->YAB1   --------->ANAC58   --------->ANAC46                                   --------->ARR14(2)   --------->ANAC58                                   <---------GLK1(2) ---->MYB46(1)                                        <---------ARR14(2) ---->MYB83                                           --------->ARR11(1) ------MYB59                                          --------->ARR11(3) ------------------>ANAC81                            <---------ARR11(3)  ---------->DOF2 ---ID1                                             ----------->ARR10  --------->ANAC58 ---------ATHB12  --------->YAB1                  ---------->DOF2      --------->ANAC58   caaacaagcaaaatccaaaatgaaaatgccaaaaaatccacaaacacacacagaaagatactgacagaataacaagaaaagaagagactctctgtttttc  22391400                                                                    --------------->AtSPL8                                                         ----------->GT1                         <---                                  --------->AHL20(2)     <---------ANAC46                        ----                      --------->AHL20(2)             <-----------HVH21       <---------AHL20(2) ----- <---------DAG2----------->GT1<----------DOF2       <---------ZAT6  <---------------AtSPL8      <---- <----------DOF2      <---------AHL20(2)          <---------At5g28300----------->GT1          -------   tcacttttttataagttttgttaatttataagctttttatataaaacaaaattactgtgaggtaaaaagaatagtacattttttttgtttatgttttcat  22391500                            <----------DOF2                          <---------At4g35610 ------ICU4             <-----------------AGL1 ----->ATHB12         <-----------GT1 ---->ICU4        <---------AHL20(2) -----YAB1    ------>ZmHOX2a(1)                                         <---------YAB1      <-------- -->YAB1      <----------DOF2                          <----------DOF2----------->GT1  --------->CCA1(2)   gatttcagtttgaatcctttttattttctgctttcggacaaatgtttcaagaaaacactttaatatacaaaaatgtgattagattgaagagatgggtcac  22391600  Previous    Next  AGI:  At1g60800.1    Description:  NIK3 (NSP-INTERACTING KINASE 3); kinase. similar to NIK2 (NSP-INTERACTING KINASE 2), protein kinase [Arabidopsis thaliana] (TAIR:AT3G25560.2); similar to NIK1 (NSP-INTERACTING KINASE 1), kinase [Arabidopsis thaliana] (TAIR:AT5G16000.1); similar to NIK2 (NSP-INTERACTING KINASE 2), protein kinase [Arabidopsis thaliana] (TAIR:AT3G25560.1); similar to leucine-rich repeat receptor-like kinase [Ipomoea batatas] (GB:BAD18102.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66109.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75190.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro do Range:  from: 22387118    to: 22391122    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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