Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->HSFB2a(1)                                                           ---------->DOF2  <---------ARR11(1)                                                    <---------ATHB12  ------->TEIL                   --------->At4g35610                   --------->ANAC58  --------->GLK1(2)              <---------At4g35610                   --------->ANAC46  --------->ARR14(2)          <---------MYB52(1)                       ------>MYB46(1)  <---------ARR14(2)         <---------SPL7                            --------->ANAC58 -------TOE2(3)  --------->ARR14(2)   --------->ZAT6                   ------>MYB83 -------------------WRI1   <-------TEIL                             --------->MYB46(3)  --------->WOX13(1)   gacgaatctttcaaacacaaatctacaagttcgttcgctaactctatgtttctctgaaaattctacagtaaccaagcaataaacaaagaccaattagcga  22375400                                                                            --------->ANAC58                                           <---------ARR14(2)              ------>NtERF2<-----------RAV1(2)                -------->P                 --------->ARR14(2) <---------ANAC46       --------->ANAC58              --------->MYB46(3)           <---------GLK1(2) <---------At4g35610     --------->ANAC46        <------ZmHOX2a(2)       --------->At4g35610          --------->At4g35610     --------->ANAC58       <---------ARR11(3)<---------HSFB2a(2)              --------->At4g35610   --------->YAB1       --------->ARR11(3)--------->HSFB2a(2)--------->GLK1(2)<---------LBD16--------->ANAC58   <------ZmHOX2a(1) <----------DOF2     ----------->ARR10<---------At4g35610   <---------ICU4   taagaggaagatcagaacaacctctttctcgatgagcttagtgaagaatcgctcggcttgagcagcggagacatcgccacgataatcacgccagacgaga  22375500                                         ------>ZmHOX2a(1)                                         ==================================HOX2a_HOX2a                                       ----------->RAV1(2)                                       --------->At4g35610                                     --------->ARR14(2)                                    <---------At4g35610                                    --------->At4g35610                                    --------->ZAT2                                    <------NtERF2                                    <---------ZAT2                                                  <                                   <---------ATERF1(1)                                  <---------YAB1                                 <------NtERF2                                       --------->ICU4 <                                 --------->ATERF1(1)                    --------->ARR14(2)          -                              <------NtERF2                             <---------ARR14(2)          -                            <----------CDC5                             --------->AGP1--------->ATHB12                           <---------LBD16                             --------->At4g35610          <                          <---------ANAC46            <---------HSFB2a(2) ----------------->AG    ---              --------->WOX13(1)<---------ATERF1(1)   --------->HSFB2a(2)<------ZmHOX2a(2)--------->WOX13(1) <-----------HVH21    ---------->DOF2<---------ARR14(2)             <------ZmHOX2a(2)<---------YAB1 -   acgcgtcccttgatatcaagcagaaacagcgcggaggcagctcctgccatgttcttccctaagagtttcgatcagatccaaatggggatgattaatcagc  22375600                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                               <---------GLK1(2)                                                                         --------->At4g35610                                                                         --------->ZAT2                                                                         <---------ZAT2           <---------ATHB51                                              <---------At4g35610           --------->ICU4                                           ------>ZmHOX2a(2)    --------->At4g35610                                            <------ZmHOX2a(2)  ================================HOX2a_HOX2a                      --------->CCA1(2)  ------>ZmHOX2a(2)                                               <-----------ARR10 --------->CCA1(2)                                                <---------ARR14(3) <------ZmHOX2a(2)                                                --------->ARR14(3) <---------At4g35610                                              <---------ARR11(3) =================================HOX2a_HOX2a                     --------->ARR11(3) ---------ARR11(3)                                                --------->AGP1 ---------ARR14(2)                                                <---------ARR14(2) -------->ARR14(2)                                       <---------WOX13(1)  ----------->ARR10  <---- -------->ARR11(3)                             <---------HSFB2a(2)--------->ARR14(2)            <---- ---------AGP1<---------TOE2(3)                --------->HSFB2a(2)<---------AGP1--------->GLK1(2) -------->ARR10            <------ZmHOX2a(1)<---------ARR11(3)   <---------CCA1(2)              ----- -------->AGP1<---------YAB1                --------->ARR11(3)  ----------->ARR10 <-----------GT1<---   gagatctgatgaaattatggttctatagaggaagaagtagcaacaacatctagatggagattgacgcagatctgcagctcagattctccatttcgcaatt  22375700                                               <------MYB46(1)                                             <--------P                               <---------DOF5.7(2)                             --------->DOF5.7(2)                             <---------MYB52(1)<------MYB83                      <---------ICU4        <-------GAMYB                      --------->ATHB12     --------->MYB55(2)                        --------->AHL20(2)                     <---------YAB1        <---------MYB46(3)                --------->AHL20(2)------ -----AHL20(2)   ------>ZmHOX2a(2)        <---------AtMYB61                <---------TOE2(3)   ------ -----AHL20(1)  <------ZmHOX2a(2)     <---------ANAC58         --------->ANAC58      --------->YAB1 ---->AHL20(2) --------->ARR14(2)     <---------ANAC58         --------->ANAC58   --------->YAB1 ------AHL20(2)<---------ARR14(2)   <------ZmHOX2a(2)        --------->MYB52(1) --------->AHL20(2)---   ttttttttttttctggcgatctgatgatttcgttatcgatccttgtggttggattaaaaaaaaaaacggaagaatttaagaaaataataatattcagaag  22375800                                                                                               <-----                                                      <-----------GT1                         <------                                                  <---------AHL20(2)                          -------                                           --------->LBD16                            ---------->DOF2        ------>NtERF2                      <-----------HVH21  ---------->DOF2    <---------ATHB12 --->ANAC58 <-----------HVH21       <---------DAG2--------->AHL20(2)           --------->WOX13(1) --->ANAC58<----------DOF2          <----------DOF2<---------AHL20(2)        ------------>CBF-------- ------->DOF2           *TSS     <-----------GT1  --------->AHL20(1)    <------ZmHOX2a(1)    <-------   caaagagctctgcctttcacccagacggtatcgttttactttttccgtcaaatttaataccatcgaaagtagaaggagagtcaatgaagaaagtcatcat  22375900                                                                    -------->ATHB1                                                                    --------->ATHB12                                                                    --------->ATHB51                                                            ----------->GT1                                                           <------MYB83  <------MYB46(1)                                                           ----------->GT1                                                           <------MYB46(1)   --------->MYB52(1)                                                          <---------TOE2(2)  <---------DOF5.7(2)                                                       <---------ANAC46  <------MYB83                                                       <---------ANAC58 <---------TOE2(3)                                                       <---------ANAC58 --------->MYB59                            ---------->DOF2       <---------ANAC58  <---------ICU4     ---------->DOF2     <---------ANAC55(2)      <---------ANAC58 --------->AHL20(1)  >>>>>>>>>TBF1     <---------ICU4                <------MYB46(1)  --------->ICU4 -------CBF         <--------HAHB4                <------MYB83     --------->AHL20(2) ---ICU4           <------ZmHOX2a(2)             <------MYB46(1)   <---------AHL20(2)         <------ -->ATHB12   <------------CBF--------->DAG2    <--------P <---------TOE1(2)--------->DOF5.7(2)------- ->ICU4   <<<<<<<<<<<<<<<<<LFY              <---------TOE2(3)      <---------YAB1       ----------->GT1 --YAB1   >>>>>>>>>>>>>>>>>LFY <-----------HVH21 <------MYB83   <---------YAB1 <----------ID1--------   tgaagaagaaaggcccattggatcattacataaagtcaggcccatataggttgggtttcgtaggttaaaattattaggttaacgacgaattagtataaaa  22376000                                                                                                 <---                                                                                       --------->ZAT14                                --------->TOE1(3)                         <---------ARR14(2)    ----- ---AHL20(2)    <---------TOE2(3)  ---------->DOF2                        --------->GLK1(2) <-------- -->AHL20(2)------->TEIL        --------->TOE2(3)<---------ANAC58        --------->GLK1(1) <---------ZAT6 ->YAB1  --------->ICU4 ----------->GT1          <---------ANAC58<----------DOF2       <---------ZAT14   ataggtttgtaatgaatcaaggatagaagtaaaacctaaaatcgaacatatgcgtttttcacaaaaactttaggggaatctagggtttgtgtagtgtcac  22376100                                                                                            ---------                                                                                            ---------                                                                                           --------->ARR11(1)                                                                                           <---------ARR11(3)                                                                                           <---------ARR14(2)                                                                  <---------ZAT14          --------->ARR11(3)                                                                  <---------ZAT18   --------->CCA1(2)                                                       ------>ZmHOX2a(2)       <---------LBD16                                                   <---------YAB1 --------->ZAT14  <---------ARR14(2)                                                  <---------KAN4(2)           <---------ANAC46   ----                                               <---------ANAC46   --------->ZAT18  --------->ARR14(2)                                               <---------ANAC58 --------------->AtSPL8     --------->ARR14(2) ------ALFIN1           --------->YAB1         <---------ANAC58 <---------------AtSPL8   ----------->ARR10 ---->MYB46(3)        ----------->GT1       xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ANAC58------- ---HVH21     <------ZmHOX2a(1)         <-----------HVH21 <---------TOE1(2)   <---------ANAC58-------   caccatgaaatcgtgaggactatcaagtataaactagaaaactgtcatggggtatgatcgaatgtttgtgtactcatttttcgtggatatgaagatatgc  22376200                                                                                                  ---        --------->KAN4(2)                                                                     <------       <---------ICU4                                                                         <------      <---------YAB1                                                                      <---------ANAC58 >CCA1(2)                                                                                 <---------ANAC58 >GLK1(1)                                             <---------ZAT14                    --------->ATHB12 ------->RAV1(1)                                      --------->ZAT14                 <---------ANAC58 -->ANAC58       --------->YAB1          <---------AHL20(2)                <---------ANAC46<---------WOX13(1) -->ANAC58      <---------YAB1          --------->AHL20(2)   ----------->RAV1(1)      <---------ANAC58   aacatttgatcattctccatgatagtattctagttcgatatataaaatttcaatagaacactgcaacatgaagtgttttgtatacttagcttgattgcta  22376300  Previous    Next  AGI:  At1g60780.1    Description:  clathrin adaptor complexes medium subunit family protein. similar to clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] (TAIR:AT1G10730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16121.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ52823.1); similar to hypothetical protein OsI_003367 [Oryza sativa (indica cultivar-group)] (GB:EAY75520.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Clathrin adaptor, mu subunit, C-terminal; (InterPro:IPR008968); contains InterPro domain Clathrin adaptor, mu subunit; (InterPro:IPR001392) Range:  from: 22372618    to: 22375824    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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