Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ----------->GT1                         --------->At5g28300                --------->YAB1 <---------AHL20(2)               --------->YAB1                <---------ICU4 --------->ICU4                <---------ICU4            --------->GLK1(2)               <---------ATHB12--------->AHL20(2)           --------->ICU4            <---------GLK1(2)     ---------->DOF2    ----------->GT1    <---------ICU4 --------->YAB1   <-----------GT1   tgaaatctaaagacacaatcatcacacagtgaaaaaattattcaacaattactaaattgttcataatgagcatcaaaataccacttaagaatctacattt  22372000                                                                                         <---------ZAT2                             <---------YAB1                                              --------->ZAT2              <---------GLK1(2)                      --------->GLK1(2)                   --------->At4g35610              --------->ARR14(2)               ------>ZmHOX2a(1)                         <---------At4g35610              <---------ARR14(2)       <---------At4g35610 ---------->DOF2  <---------YAB1   ctatatgtattcaacagatttgaagcaaatgcttattgtgaagctaatcctagagaatcgaaaatgcaatttggatttatgaaaccttgagagctgggta  22372100                                         ------>MYB83                                    ------>NtERF2                                   --------->DEAR3(1)          <---------ZAT18                     <---------ANAC58    ------>MYB46(1)    <---------ANAC58                 --------->HSFB2a(1)<---------ALFIN1 --------->ANAC55(2)              <---------At4g35610                 --------->HSFC1(2)----------->HVH21 <---------O2                     --------->ZAT2                 <---------HSFC1(2)--------->DEAR4(1)<---------ANAC55(2)              --------->At4g35610            <---------LBD16   <---------ARR14(2)     <---------ANAC46              --------->At4g35610          <---------ARR14(2)  --------->ARR14(2)     <---------ANAC58    --------->ARR14(2)      <------NtERF2  <---------ANAC58  --------->AtMYB61    <---------ANAC58--------->ICU4      ------>NtERF2--------->GLK1(2)--------->ORA47(1)    <---------ZAT14<---------ARR14(2)       ---      --------->LBD16--------------------->WRI1      <---------ANAC58 <---------TOE2(3)           ---     --------->RAP2.6(2)     <---------CCA1(2)       <---------ANAC55(1)<------ZmHOX2a(1)       <----    <---------DEAR3(1)     ------>ZmHOX2a(2)         --------->O2 <----------DOF2  <---------At4g35610   atagaggccgcgatttcggagtttcttgatcgtatcgccgacctcccatttgaagacgtgtttagtgcctttgaggaactgattaagctgctgtcgaact  22372200                                                                     <----------DOF2                                                --------------->AtSPL8                 ------>ZmHOX2a(2)         --------->MYB46(3)              <---------ARR14(2)    ----------------------->TaNAC69(2)        --------->SPL7                   --------->ARR14(2)   --------->ETT(2)       --------->ARR14(2)      --------->ZAT14                   ----------------------->TaNAC69(2)  <---------O2         <--- ------>WRKY12                    --------->ZAT14            ---------->ID1 --------->O2        <---- ------>WRKY38(1)<----------DOF2  <---------ZAT14   ------->TEIL  ------>ZmHOX2a(2)  <---------ARR14(2) ------DOF2  <---------ALFIN1<-------GAMYB<-------TEIL   <----------DOF2  <-----------GT1--------->At4g35610   ttgacctctgtaccaccatctttgaagaggcgattgtacagaggttcttcgatgtacttctttgtcgatctctttgtaacgtctctcgatcggctcaaat  22372300                               --------->MYB52(1)                                       --------->ANAC58                           --------->ZAT14                                              --------->ANAC58                        ----------->GT1                                              --------->ZAT2                      --------->At4g35610                                            <---------ZAT2                      --------->ZAT14                                    <-----------HVH21       <---                    <------NtERF2                                     <---------At5g28300       <---- --------HVH21    <---------DEAR3(1)         ----------->GT1  --------->TOE1(3)     --------->ANAC58 -------RAV1(1) <-----------HVH21 ------->GAMYB               --------->TOE2(3)*TSS --------->ANAC58   gtcgcatcgccattttctcgtcggagcagtaaacaacgacaacgagaaggttttttgagtaaaaccctaattcactgtcacttcccaagctcgaaacaga  22372400                                                   <---------AHL20(2)                   --------->ICU4              <---------ICU4                   <---------YAB1       ----------->HVH21  ------>NtERF2    <------ZmHOX2a(1)      <----------DOF2 <---------YAB1<---------RAP2.6(2) ---------CBF   <---------YAB1          ----------->TGA1--------->RAP2.6(3)    ------------>CBF -----GLK1(2) ----------->GT1  <---------AHL20(2) <-----------GT1             <-----------GT1   attggaggagaaagtatggtgattatgggctttttaatgggcctgacgattatttcatttcggcccatactatatcagttaaacaatatgagaaacacca  22372500                                 --------->ZAT14                               <---------At4g35610                           <---------ICU4                               --------->TGA1a                               --------->YAB1                               --------->At4g35610                          <---------YAB1   <-------TEIL --------->YAB1 --------->ANAC46   --------->ATHB51       <---------YAB1  <-----------GT1            <---------ALFIN1  --------->YAB1      <-------TEIL               -------   aaatatacgttctctctattgtaaggctctctcacctcactctattgaagcataatttgtttatgtagtttcattttgatcataactcgagagaaaccta  22372600                                               <-----------GT1                                           --------->TOE2(3)                                     --------->TOE2(3)                                            ---                                     --------->TOE1(3)     ------>ZmHOX2a(2)                   ------                                  --------->ARR14(2)   <---------YAB1                   <---------At4g35610 -->TOE2(2)                    --------->AtMYB61     --------->YAB1                 <---------REM1(1)   tgtaaacatagacgaatgccccaaaaaacaaaaccaaaacctcaacgtttaacaattttgatcgcagaacgaacacatagacagaaatgtagcagtctaa  22372700                 <---------ANAC58                 <---------ANAC58                                                            <-------     <---------ICU4                                              ---------->DOF2             --------     --------->YAB1  ---------->DOF2             <---------AHL20(2)                      <---------ANAC58    --------->ICU4 ----------->HVH21             --------->AHL20(2)                      <---------ANAC58 -------->GT1    <---------ANAC46                --------->AHL20(1)<----------ID1        <---------ANAC46 ---->DOF2------->TEIL  ----------->GT1  ----------->GT1   --------->YAB1          --------->GLK1(2)   aggaaaataatgaaccatgtcgtgaaaggttacagagagcctcatgtaaaataaaatagaatcaccataaagacaaattcacaagaatatggcttctaaa  22372800       ----------->GT1                                                           <----------DOF2  <--      <---------TOE2(3)                                               <---------ANAC58    --------->ANAC46    ---------->DOF2                                                   <---------ANAC58    --------->ANAC58   <---------AHL20(2)                                                 <---------ANAC46    --------->ANAC58   --------->AHL20(2)                                            ------>ZmHOX2a(1)      <-----------RAV1(2) --HSFB2a(2)         --------->At4g35610                 <----------DOF2     <---------ANAC58     <-- ->HSFB2a(2)         <---------At4g35610     <----------DOF2  ---------->ID1 <---------ANAC58 -------   acaaattaaaggaaaatttgatcagctaaaatgtttcaaaacgttttcttttccctctacttttgtcctgtttcgttttgcttctttgattcaggcaatt  22372900  Previous    Next  AGI:  At1g60770.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G02370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42647.1); similar to unknown [Populus trichocarpa] (GB:ABK95769.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 22370366    to: 22372379    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g60780.1    Description:  clathrin adaptor complexes medium subunit family protein. similar to clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] (TAIR:AT1G10730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16121.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ52823.1); similar to hypothetical protein OsI_003367 [Oryza sativa (indica cultivar-group)] (GB:EAY75520.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Clathrin adaptor, mu subunit, C-terminal; (InterPro:IPR008968); contains InterPro domain Clathrin adaptor, mu subunit; (InterPro:IPR001392) Range:  from: 22372618    to: 22375824    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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