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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
---------
<--------
--------->
TOE2(3)
--------->
YAB1
<-----------
ARR10
--------->
ARR11(3)
<---------
ARR11(1)
<---------
ARR14(2)
--------->
ARR14(2)
<----------
DOF2
<---------
ARR11(3)
<---------
DAG2
<---------
GLK1(1)
--------->
TOE2(3)
XXXXXXXXXXXXXXXXXXXX>
MIR851-5P
-->
AHL20(2)
<-----------
GT1
--------->
ZAT14
<---------
CCA1(2)
---
AHL20(2)
----------->
GT1
<---------
ZAT18
<-------
TEIL
atatcaatttcaaagtcttgaaaataaccttttttttttttggctatgagtcttgtgaagttaacttggtgaactctcgactcacgatgcatatcttaat
22364300
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
YAB1
<---------
AtLEC2
<---------
AHL20(1)
-----
----------->
RAV1(1)
<---------
ICU4
--------->
ICU4
<-----
--
YAB1
<-------
TEIL
<----------
DOF2
--------->
ZAT14
<-------
------>
AGL15
--------->
ICU4
<---------
ANAC58
<---------
ZAT14
--------->
AHL20(2)
--------
-------
AGL15
<---------
YAB1
<---------
ANAC58
--------->
ZAT18
<---------
AHL20(2)
--------->
ARR11(3)
tgagcaacatgattcataattcatcttttcatgtctcttgccaacttccaatagagtgcattgacattatttttttaatacattatacatatatcatgca
22364400
<---------
YAB1
----------->
GT1
--------->
MYB52(2)
<---------
ICU4
---------->
DOF2
-->
TEIL
--------->
YAB1
---------->
DOF2
----
AtLEC2
<--------
HAHB4
<---------
ANAC58
<---------
YAB1
--
YAB1
--------->
GLK1(2)
<---------
ANAC46
<---------
YAB1
->
AtLEC2
--------->
AtLEC2
<---------
ANAC58
<---------
AHL20(2)
tgtttgtttctcatccatggagaatcatttttgaaatttttggatttttgaaattgcttaaaaagaaagaaaaaaactcaatttttattgtcatacaatg
22364500
<---------
GLK1(2)
---------->
DOF2
--------------->
AGL15
--------->
TOE2(3)
----------------->
AGL3
--------->
ARR14(2)
<---------
ARR14(2)
--------->
GLK1(1)
<---------
GLK1(1)
<---------
YAB1
--------------->
AtSPL8
<---------
AHL20(2)
------>
ZmHOX2a(1)
---------->
DOF2
-----
ttttccaaaatatgtgtacatgttcttgcatatgagttaattagtgagggtttcctcaaaaagattgttgtatttttggaaaacaaagtttatttttgga
22364600
<---------
TOE2(3)
--------------->
AGL15
<---------------
AGL15
----
<---------
ICU4
----------------->
AGL2
------
--------->
ICU4
<-----------------
AGL2
<------
<---------
YAB1
<-----------------
AGL3
<------
<-----------
GT1
--------->
YAB1
--------->
GLK1(2)
<------
--------->
ARR14(2)
<---------
ATHB12
----------------->
AGL3
-------
<---------
ARR14(2)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
<------
---->
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
GLK1(1)
-------
tattggttctgcattttacatctaatttgttttttaaatcataattttagaaaatctattactaaattaagaaatctatgaatggtttacttcattccgt
22364700
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
GLK1(1)
--------->
GLK1(1)
--------->
AHL20(2)
--------->
ARR11(3)
----------->
TBP
<---------
ARR11(3)
--------->
ZAT6
<---------
GLK1(1)
------>
DOF2
------->
GAMYB
--->
LBD16
----------->
RAV1(1)
---
ANAC58
*
TSS
<---------
ARR14(2)
---
ANAC55(2)
--------->
ANAC58
<---------
CCA1(2)
---
ANAC58
--------->
ARR14(2)
===========================
RAV
-->
ANAC55(2)
<----------
TaMYB80
----------->
RAV1(2)
--------->
GLK1(1)
<
---
ANAC46
------>
ZmHOX2a(1)
--------->
ANAC58
<-----------
GT1
--------->
MYB52(1)
<--
---->
GT1
<------------
CBF
<---------
ARR14(2)
<-----------
GT1
--------->
ARR14(2)
<---------
AtLEC2
aaaacactataaattgtcctaaactcatattcgctctc
aagtcaaaactcttctattttcccctgtcttcatatccaacagagatctcttc
atggctcca
22364800
----
-----
--------->
At5g28300
--------->
LBD16
<------
NtERF2
<---------
ATERF1(1)
--------->
ABI4(1)
------>
NtERF2
--------->
RAP2.3(3)
<-----------
GT1
<---------
DEAR3(1)
<---------
DEAR3(1)
--------->
ATERF1(2)
<------
NtERF2
--------->
RAP2.3(2)
<---------
RAP2.3(1)
--------->
DEAR3(1)
<---------
RAP2.3(3)
--------->
ERF1
<---------
DEAR3(1)
--------->
DEAR4(2)
<---------
DEAR4(1)
--------->
ANAC58
--------->
ORA47(2)
<---------
DREB2C(2)
<-----------
HVH21
--------->
ATERF1(1)
<---------
At1g77200
<---------
At4g35610
--------->
RAP2.3(1)
--------->
ETT(1)
--------->
ANAC46
--------->
At4g35610
<---------
RAP2.3(1)
<-----------
HVH21
--------->
ANAC55(1)
----------------------->
TaNAC69(2)
<---------
ATERF1(2)
<-----------
RAV1(1)
--------->
ANAC58
--------->
YAB1
--------->
ZAT14
-----------
---------
At5g28300
--------->
MYB52(1)
--------->
YAB1
<---------
ZAT14
--------->
ATERF1(2)
-------
ATHB12
<---------
REM1(1)
<----------
DOF2
--------->
ICU4
<---------
ZAT18
<---------
ATERF1(2)
attactgtcggcgatgttgtaccagacggaactatctctttcttcgatgaaaatgatcagcttcagaccgtctctgttcactctatcgccgccggtaaaa
22364900
------->
MYC2
<-------
MYC2
<----------
DOF2
<---------
ANAC58
<-----------
RAV1(1)
<-------
TEIL
<---------
At4g35610
------>
ZmHOX2a(1)
<-------
MYC3
<---------
ZAT2
----->
DAG2
<---------
ANAC46
<---------
ALFIN1
<---------
DAG2
------>
ZmHOX2a(1)
<----
----->
DOF2
----------->
RAV1(2)
------->
MYC3
<----------
DOF2
<----------
DOF2
<-------
>
GT1
<----------
DOF2
<---------
ANAC58
<---------------
AtSPL8
<-----------
GT1
--------->
At4g35610
aagtcattctctttggtgttcctggtgctttcactcccacatgcag
gtacaaagtttcaaacgctttttcagatttatcctttgatgctaagctgatgga
22365000
--------->
ATHB12
<-------
TEIL
------
--------->
ATHB12
<---------
AtLEC2
--------->
ZAT2
<---------
YAB1
------->
TEIL
<---------
At4g35610
--------->
ARR11(3)
<----------
DOF2
<-------
MYC2
--------->
At4g35610
<---------
GLK1(2)
<---------
ANAC58
------->
MYC2
<------
ZmHOX2a(1)
-----
GLK1(2)
<---------
ANAC58
<---------
TOE1(3)
------->
MYC3
=================
--
WOX13(1)
<---------
ANAC46
<---------
TOE2(3)
<-------
MYC3
---------->
DOF2
<------
ttcttagattttgatttgagaattggcgtttttggtttttctgaggttag
catgagccatgtgcctggattcattgggaaagcagaggagctgaagtcaa
22365100
<--------
P
<---------
ZAT6
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
ANAC58
<---------
GLK1(1)
--------->
ATHB12
--------->
GLK1(1)
<------
ZmHOX2a(2)
------->
TEIL
--------->
ARR11(3)
---->
DOF2
--------->
ARR11(3)
<---------
YAB1
<---------
ARR11(3)
--------->
ZAT14
==================
HOX2a_HOX2a
<---------
YAB1
<---------
AGP1
<---------
ANAC58
<---------
ZAT14
---
WRKY12
<---------
ARR11(3)
--------->
ICU4
<---------
CCA1(2)
<---------
ANAC46
agggtatcgatgagatcatttgctttagtg
gtaagtatgaatattgatatgttttggatctctactctattcttgcctctatgagtttgtgtatagtgac
22365200
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AGI:
At1g60740.1
Description:
peroxiredoxin type 2, putative. Identical to Peroxiredoxin-2D (PRXIID) [Arabidopsis Thaliana] (GB:O22711;GB:Q67ZB5;GB:Q8LDV2;GB:Q9XEX3); similar to TPX2 (THIOREDOXIN-DEPENDENT PEROXIDASE 2), antioxidant [Arabidopsis thaliana] (TAIR:AT1G65970.1); similar to type 2 peroxiredoxin [Brassica rapa subsp. pekinensis] (GB:AAD33602.1); contains InterPro domain Redoxin; (InterPro:IPR013740); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335)
Range:
from: 22364739
to: 22365617
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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