Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                 ----                                                                    <---------ARR14(2)           <---                                                                    --------->ARR11(3)           ----                ----------->HVH21                                   --------->ARR14(2)          -----                <---------YAB1                                      ------->TEIL           --------->bZIP60(1)              --------->YAB1               <----------DOF2         <---------CCA1(2)       <---------bZIP60(1)         <----------DOF2              <----------DOF2   <---------GLK1(1)                <-----------GT1   ctacatgttctctttctcatgacagagaatagactttcaactttccttttgacattggaactctctgatgtatcttcttcaccagaaattttgacatcac  22357700         ----------->HVH21       ==================bZIP_DOF       ==================bZIP_DOF       --------->At4g35610       <---------At4g35610       --------->O2       --------->TGA1a       <---------O2       <---------TGA1a                                                      ------>ZmHOX2a(2)       --------->ANAC55(2)                                                 <------ZmHOX2a(2)       <---------ANAC55(2)                                           --------->TOE1(2)   <-----------HVH21                                               --------->ARR11(3) ---->MYB46(1)                                                     --------->ARR14(2) ---->MYB83                         <---------ANAC58               --------->GLK1(2)       ---------- ----->AtMYB61                      <---------ANAC46               <---------ARR14(2)     <---------ZAT18 ------ALFIN1                       <---------ANAC58              --------->RVE1(1)       --------->ZAT18 ----->DEAR3(1)           --------->YAB1          --------------->AGL15   <---------ARR11(3) ---->MYB46(3)---------->DOF2  ---------->DOF2    <---------------AGL15   --------->ARR11(3)        -   caccctgtcatgtgacaaaagactaaaatcagaaaaaggcttgtgcaaattgctccattgagaactaaaaatctgggatctaatgcaaatagtgggcaaa  22357800                                                       <---------ZAT6                            --------->ANAC58   <------ZmHOX2a(2)                            --------->ANAC58------>ZmHOX2a(2)             <---------ATHB12<---------At4g35610     <---------ANAC46  --------->ANAC58    --------->GLK1(2)   --------->ARR14(2)        --------->At4g35610  --------->ANAC58   <---------GLK1(2)    <---------ARR14(2) --------->ALFIN1 ->GT1       --------->MYB46(3)          =============HOX2a_HOX2a<---------At4g35610<-------TEIL --------->DOF2      <---------ARR14(2)  <------ZmHOX2a(1)   <---------REM1(1)--------->ANAC46     --   aaaaaagccatttcaaccatggagattcttaagctacttaagaggatcgatcatttagtgtaagtgtagcagataaaaacgcgaaattcatgaaatgaga  22357900             <----------DOF2            --------->TOE2(3)    <-----------HVH21    <-----------TGA1   --------->ANAC55(1)                                                                    ------>ZmHOX2a(1)   --------->ANAC55(2)                                                                   --------->TOE2(3)   --------->bZIP60(2)                                                                  ------>ZmHOX2a(2)   <---------ANAC55(2)                                                                 <------ZmHOX2a(2)   --------->ANAC46                                                                   --------->ARR11(3)   --------->bZIP60(1)                                                                <---------ARR11(3)   --------->ANAC58                                                                   <---------ARR14(2)   <---------bZIP60(1)                                                                --------->ARR14(2)   <---------TGA1a                                                                   <---------GLK1(1)   =====================bZIP_DOF                                                     --------->GLK1(1)   --------->O2                                                                     ----------->ARR10   <---------O2--------->AHL20(2)                    --------->CCA1(2)         --------->ANAC58   --------->ANAC58                                 <---------ARR11(3)         --------->ANAC58   --------->TGA1a                              ---------->DOF2            --------->ANAC58  <-----------STF1                       --------->ICU4                    --------->ANAC58     <---- ------->ARR11(3)     ----------->GT1 --------->ICU4--------->ARR11(3)   --------->CCA1(2)<---------YAB1   tgatcacgtcatttcctttatatatggttcaatgtctgcaatactgatgagaaagatatatagatgaatagagagagacgcacgaagagatccttattga  22358000                                                                                        ----------->HVH21                                                                                      <---------MYB46(3)                                                                                     --------->ALFIN1                      --------->ARR14(3)                                     --------->ANAC58                      <---------ARR14(3)                          --------->ZAT2     <---------AtMYB61                      <---------ARR11(3)                         ------>MYB46(1)     <---------DEAR3(1)            --------->ARR14(2)                                   ------>MYB83--------->AtLEC2            <---------ARR14(2)                                 --------->MYB46(3)  ------->GAMYB            <---------GLK1(2)                                  <---------MYB59--------->MYB46(3)          ----------->ARR10                        <------ZmHOX2a(1)         --------->ANAC46   --------->CCA1(2)  --------->ARR11(3)         <---------TOE2(3)<---------ZAT2--------->MYB52(1) -----TOE2(3)   <---------HSFB2a(2)  <-----------GT1       --------->MYB46(3)--------->ANAC58   cgaagagatgctcagatactcgaagaccttcttccattttcacatttagttgaggaattgaacgacccaactcggttccaagcaacggtggtgactgttt  22358100                                       --------->ZAT2   <---------MYB46(3)                                       <---------ZAT2  <--------P                                       --------->At4g35610                                       ----------->RAV1(2)                                       <---------At4g35610                                    <---------ATHB12  <-------GAMYB                                  --------->WOX13(1) <------MYB46(1)                                --------->ZAT14      <------MYB83                      <------------CBF                       --------->ZAT2*TSS            <---------ANAC46               ------------>CBF<                       --------->At4g35610    <---------ZAT14            --------->ANAC46          --                       <---------At4g35610 <---------ANAC46              --------->ANAC58        <---        <---------AHL20(2)      <---------ZAT14     --------->MYB59      --------->ANAC58 --------->MYB59   ctgcccaaaatttatcgaagagaagagctgagactgcaatcagctgagtgaagttgggttgatgaagatgaacacacacaaaaaaacacaattgggtcgc  22358200     --------->REM1(2)    --------->ALFIN1        --------->ARR14(2)  ------->GAMYB             <---------ARR14(2)                      <---------YAB1 ---------At5g28300    <<<<<<<<<TAC1                  ----------->GT1                               - ------->MYB52(1)    --------->ZAT6         ------>ZmHOX2a(1)  --------->YAB1 <-----------GT1<------- -------DOF2    --------->YAB1  ------>ZmHOX2a(1)  --------->MYB52(1)    --------->ATHB12    --------   ttaaccgtgttggaccaaaaataacactcgaatcctggtttaagtcctaaacaaaaccgaaaataacataatgaatgattttaccatttgaaactctaga  22358300            ---------->DOF2                                                                     <----        --------->GLK1(2)                                                                     -------   ---------->DOF2                                    --------->At4g35610            <---------ZAT2 ---------->GT1                                       <---------At4g35610            --------->ZAT2 --------AGL15                           <---------YAB1        <---------ANAC46 <------ZmHOX2a(1) ------->AGL15                        ------->TEIL   --------->GLK1(2)         <----------ID1 <------   attggtaaagaatcgaaagatgatcagaagttattagttgaatctgatagagaagaagctgaattgagtagaagtttatagaggacaagctggttatcac  22358400                                                                               --------->MYB59                                                                               <---------TOE2(3)                                                                               --------->DAG2                                                                     <----------DOF2                                                                    <---------------AGL15                                                                    <---------DAG2                                                                   ----------------->AGL3                                                                   ----------------->AGL2                                                                   <-----------------AGL2        <---                                                                   <-----------------AGL3        <---                                                                   <-----------------AG       <------                                                                   ----------------->AGL1  --------->ANAC46     --------->GLK1(2)                                             <-----------------AGL1<-----------GT1 -----YAB1                           <---------ANAC46              ----------------->AG------->TEIL -->YAB1                     --------->ANAC58        <-----------GT1--------------->AGL15--------->YAB1 -----GT1                    --------->ANAC58    ------->TEIL      ==================================   cattgagactctgaattggtaagagaagcacaagttattgagtagaagatgaattttacaatatagatagccttttttggtaaggtatgtatcacaacac  22358500                   <---------------AGL15                   --------------->AGL15             <---------MYB46(3)                                                                <-----             <------MYB83                                          --------->AHL20(2)        --------   <---------AHL20(2)                                            --------->TOE2(3)          <-------- ------DAG2  <------MYB46(1)                               --------->ZAT6       --------->ANAC46 -------DOF2 ----------->GT1                              --------->GLK1(1)     --------->ANAC58 ---ALFIN1  --------->MYB59    ----------->GT1        --------->HSFB2a(2)       --------->ANAC58 ==================================MADS_MADS         <---------LBD16   <---------AHL20(2) --------->YAB1   tttatttatagagtttggttacaatgtatggaaatgtaaaattgaagttttcacttggggaactctacattatttattcttcaaggcattaaccatgata  22358600  Previous    Next  AGI:  At1g60700.1    Description:  forkhead-associated domain-containing protein / FHA domain-containing protein. similar to EMB1967 (EMBRYO DEFECTIVE 1967) [Arabidopsis thaliana] (TAIR:AT3G54350.1); similar to EMB1967 (EMBRYO DEFECTIVE 1967) [Arabidopsis thaliana] (TAIR:AT3G54350.2); similar to EMB1967 (EMBRYO DEFECTIVE 1967) [Arabidopsis thaliana] (TAIR:AT3G54350.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO61055.1); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984) Range:  from: 22355497    to: 22358137    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g60710.1    Description:  ATB2; oxidoreductase. similar to aldo/keto reductase family protein [Arabidopsis thaliana] (TAIR:AT1G60730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45271.1); contains InterPro domain Aldo/keto reductase; (InterPro:IPR001395) Range:  from: 22358418    to: 22360426    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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