Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------YAB1 ------ICU4 -----YAB1                               --------->AHL20(2) ---->ICU4                               --------->YAB1                                             < ---ICU4                              --------->WOX13(1)                                          --- -->YAB1                  <---------ANAC58 <---------TOE2(3)                                    <---- --ATHB12                 <---------ANAC58---------->DOF2         --------->At5g28300     --------->At4g35610 ->ICU4         <------ZmHOX2a(2) <---------AtLEC2               ----------->GT1         --------->GLK1(2)   tatcacaggctcacagcgatccaagtttgcttatttgcatcaattaaagtttaaaaaacaaaaaaaactgtaaaattaagaagtcgaagagaagctaaat  22333500                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                 <---------AHL20(1)                                                                              <--------ATHB1                                                                              --------->AHL20(2)                   --------->YAB1                                             <---------AHL20(2)                 <---------ARR11(3)                                           <---------ICU4         --------->ATHB12                                                     --------->ATHB51    <---------ATHB12                                                         --------->ICU4  --------->WOX13(1)                                                         <---------ATHB51    <--- ---------ATHB12 --------->GLK1(2)                                  --------->AHL20(2)      --------- ------>WOX13(1)<---------GLK1(2)                        <----------DOF2     <---------ATHB12   ----- -----ATHB12 --------->YAB1 >>>>>>>>>TBF1    <---------YAB1         <---------AHL20(2)      <--------   caatcaatgaatgattcagaatcttaagaagaagaagatgggttttgatgatagaaacgctttgaaacaataaaatccaataatttaattcaaagatttt  22333600                                                                                         <------ZmHOX2a(1)                                                                                        --------->ANAC58                                                                                        --------->ANAC58         ---------->DOF2                                                      <---------At4g35610      <------ZmHOX2a(1)                                                  <---------GLK1(1)    <---------TOE2(3)                                                    --------->GLK1(1)    <---------TOE1(3)            ----------->GT1                       <XXXXXXXXXXXXXXXXXXXXXMIR4221 ------AHL20(2)                 ----------->GT1                   ----------->GT1   <------ZmHOX2a(1) >ARR11(3)               --------->MYB52(1)                      --------->DAG2  --------->At4g35610 ---->AHL20(2)          --------->ARR11(1)---------->DOF2      ---------->DOF2--------->ZAT2 -ARR11(3)          ---------->DOF2   ---------->DOF2     --------->ATHB12    --------->At4g35610   aaatttaaggagaaagaagaataaaagaaacggatgggaaaaaagaaagaatgaaatgaatgatggaaaggtgagaaatcagcagaggacaggacacagt  22333700                   <---------ANAC58                   <---------ANAC46                   <---------ANAC58                   <------MYB83                   <------MYB46(1)                  --------->MYB111(2)                  --------->MYB55(2)                  <---------MYB46(3)              --------->ALFIN1     <---------RVE1(1)                           --------->ZAT6             <------ZmHOX2a(1)    --------->ARR11(3)                         --------->YAB1       --------->ALFIN1           <---------ARR11(3)                       --------->AHL20(2)     --------->ALFIN1    ---------->DOF2                              ----------->GT1    <------ZmHOX2a(1)  <------NtERF2                     ----------->GT1  --------->YAB1 <---------AHL20(2)   tgtgaaggagtgggaggagttgggtggcaaagtcgagatattaaaaacaaaacaaaaacttgaaaaatagactcgaaaataatactaacatttttttttt  22333800                                        --------->ALFIN1                                        <---------AtMYB61                                       <-------GAMYB                                      <---------MYB46(3)                                     <---------DEAR4(1)                                     <---------ANAC58                                     <---------DEAR3(1)                                     <---------DREB2C(2)                                            <                                     <---------RAP2.6(2)                                     ------>NtERF2                                     <---------ANAC58             <---------MYB52(1)        <--------                                     <---------ANAC46            --------->LBD16            ---------                                    <---------ABI4(1)            <-----------HVH21          ---------                                    <------NtERF2               --------->ANAC46            <--------                                    --------->ATERF1(1)         --------->O2                ---------                                   ------>NtERF2               <---------LBD16              ---------                   ----------->GT1<---------DEAR3(1)           --------->LBD16              ---------                --------->YAB1    --------->ALFIN1        <---------GLK1(1)              ----------->TGA1       --------->YAB1             ----------->HVH21       --------->GLK1(1)              ----------->HVH21      <---------YAB1        <-----------GT1      <---------ARR14(2)  <-------GAMYB       ------------   --------->ICU4  --------->YAB1<---------MYB52(1)  --------->At4g35610                <-----------HVH21 --------->At4g35610        <---------ARR14(2)   --------->ARR14(2) --------->MYB52(2) <---------ANAC58 <---------At4g35610     --------->YAB1<------NtERF2 <---------At4g35610               <---------ANAC58   gggagatgatgataacaagaatagtaatagtaaccggtggcggtggtattggttctgctgatttccccgtgagttgtgccttctctctggtgtgacgcca  22333900  --------->ZAT6 -----------GT1                          *TSS -TGA2(1)                               <----------DOF2 >bZIP60(1)                             <------------------------ANAC81 >TGA2(1)                            ---------->ID1 -bZIP60(1)                         <-----------GT1        ----------->HVH21 >ANAC46    <-----------GT1    ------>ZmHOX2a(1)           ------>ZmHOX2a(1)             <---------AHL20(2) >ANAC58<----------DOF2        <---------DAG2            ----------->RAV1(2)  <<<<<<<<<TBF1   ------- >ANAC58<---------DAG2         <----------DOF2      <-----------GT1        <<<<<<<<<TBF1 --------->AHL20(2) ----------->TaNAC69(2)     ---------->ID1       <---------AHL20(2)------------>CBF<----------DOF2   ttttactctacttttctccattttccctctgtcctttttctccttttctatttttttcttcctgaccagttcaattcttcttcttctttttttaaataaa  22334000                                                         --------->MYB46(3)                                                        --------->ANAC58--------->SPL7                                                        --------->ANAC58<---------LBD16                         --------->ZAT6        <---------YAB1         <---------SPL7         <------- ----------->GT1       ----------->RAV1(1)    <---------TOE2(3)      --------->ETT(2)        <------- --->DOF2     <---------AHL20(2)             <-----------GT1     <---------AtMYB61 <----------DOF2   gaagagttcaaacttttaaaatgggcaacactaatttgtttgctaatttacgatagggacccaatgtatggtcgtccggtttagtctttttgttttttat  22334100                                               <---------ANAC58                              --------->MYB52(2)             <---------WOX13(1)                              <---------MYB46(3)            <---------ANAC46                              ----------->GT1  <---------ANAC58                                     -   <---------ZAT14          <---------ANAC46   <---------ANAC46           <---------AtMYB61     <---- --YAB1                 <-------MYC3        <----------DOF2--------->ATHB12                     <---- --AHL20(2)             ------->MYC3  <-----------GT1   <---------At4g35610 <------------------------ANAC81   tagactaaactaaatttgaaatcacatgtggtttgttatttatctactttcgtgtttgagttgattggaactagttttggttttagttttgtttagtttc  22334200                                                               ======================================                                                            --------->REM1(1)                                                         --------->TOE2(3)                                                         --------->TOE1(3)                                                        --------->HSFC1(2)              <------------                                                <---------ANAC58  --------->ATHB51      -------------                                                <---------ANAC46 --------->ICU4        <-------------                                      --------->AHL20(2)<---------HSFC1(2)   --------->At4g35610    <                                  --------->AHL20(2)    <---------HSFB2a(1)  <---------At4g35610    - --------->ID1                 --------->YAB1 --------->ZAT14  --------------->AGL15   ============== -----ANAC58                  <---------YAB1  <---------ZAT14  <---------------AGL15   <------------- -----ANAC58    --------->ARR11(3)--------->YAB1<---------ANAC58 <---------YAB1     --------->ICU4  -   ttggctcattcttctggttatcttggtatgctataataaaaaaaatactggagtgagaaccttcaccattatgggtttgaactgccataactaaatttgg  22334300      <---------YAB1   <---------YAB1 ===MADS_MADS ---AGL15       ------>ZmHOX2a(2) -->AGL15      <------ZmHOX2a(2) ----AGL2     <---------ARR14(2)                          ----------->GT1 ---------ARR14(2)                                       --------->DAG2 -------->ARR14(2)                                      ---------->DOF2 ============================================================MADS_MADS                      --------- ----AGL3     --------->ARR14(2)                <---------YAB1                  --------->YAB1 -------->GLK1(2)                            --------------->AGL15----------->GT1          <---------TOE1(2)   agaatatgattattcagatcgggtttgtttagaaatcgacatttctacttatatttggaaaagttatatagtagaaaatcaaacaaaatgtcgaatgtta  22334400  Previous    Next  AGI:  At1g60610.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G10650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66101.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066) Range:  from: 22331577    to: 22333941    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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