Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->DEAR3(1)                                               --------->AtMYB61                                               <---------ALFIN1                                            --------->AtMYB61                                            <---------ALFIN1                                           --------->MYB46(3)                                  ------                                         --------->ANAC58                                   <--------           <---------ZAT6         ----------->GT1 <---------DAG2                            --------- ------>ZAT2                 ------>ZmHOX2a(1)--------->MYB46(3)                  --------->AtMYB61-- -------At4g35610     <---------RVE1(1)  --------->ANAC58                ------>MYB83   --------->TOE2(3) -------ZAT2         <---------ARR11(3)  --------->ANAC46                ------>MYB46(1)--------->TOE1(3) ------>At4g35610    --------->ARR11(3)<---------ALFIN1             <------ZmHOX2a(1) <---------ARR11(3)   agctcgatttctagtgttgagacgatatttcctactgggtaacacaccaccaccttctccatagttctcaggaccaaatgaacaccaataccttcaataa  22314600                                              <----------DOF2                                     <----------DOF2                                   <------ZmHOX2a(2) --->YAB1                         --------->ARR11(3)                                       ---------- -------AGL15                     <---------ARR11(3)                                     --------->ANAC46 ------>AGL15                     --------->AGP1                                    <---------ARR14(2) --------->GT1       ----------->GT1------>ZmHOX2a(2)       ----------->GT1         --------->ARR14(2)   gaagtaaaacaaatgaaaaccacaagtgaaaaatgagatctttgagtactttgaaactgaaatggaaacttacagtctatattccaaatactcgtcgctc  22314700                                                           --------->ZAT18              <---------YAB1                                                           <---------ZAT18            --------->YAB1                                                   <---------ANAC46                  --------->ICU4                                     <----------DOF2   --------->ALFIN1              <---------ATHB12 >ID1<----------DOF2               ------>ZmHOX2a(1)  --------->REM1(2)            <---------At4g35610   ttgtactctttgagactgcctcgagagcgttttcttcctctttcgatgtggaatcgtgtagggcactctgcgtttgagcattctccgatgatgaattcgt  22314800                                                              <-----------HVH21                                                           <-----------RAV1(2)                                                       <------MYB46(1)                                                       <------MYB83                                                      --------->MYB59                                                   --------->ARR14(2)       <---------SPL7                              <---------ARR14(2)      <---------ANAC58                           --------->LBD16      <---------ANAC46                         ----------------->AGL1      <---------ANAC55(1)                      <-----------------AGL1      <---------ANAC58                         <-----------------AGL2          ---------->DOF2<------   cgactcttgcgtatggaactaatgctacttggtcgtgatgctctgatgttccgaatttggtccaggtcaaatcagcccatgaaaagtcttctacttgtgg  22314900                                                          --------->ALFIN1                      -------->HAHB4                  <---------At4g35610           <------MYB83                      --------->ATHB12                --------->ZAT2        --------->LBD16                      <---------ICU4                  --------->At4g35610  --------->HSFB2a(2)                      <--------ATHB1                  <---------ZAT2       <---------HSFB2a(2)                     <---------YAB1                 --------->ZAT18     --------->PCF2         <---------GLK1(2)                          <---------ZAT14    <-----------HVH21  --------->ZAT18    <---------ATHB12            <---------ANAC58--------->ZAT18    <------MYB46(1)  <---------ZAT14    --------->ICU4              <---------ANAC58--------->ZAT14   --------->MYB59 ---ANAC46          <---------TOE2(3)          <---------YAB1    <---------ZAT14   <---------TOE2(3)   gttttgcactggaatctcttctaatgattcgactatttccatctctgttttgagtgagctgtgcgactgcacaggtcccagaaattaggttttttttaag  22315000                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                <---------AHL20(2)                                                                             --------->AHL20(2)                                                                          --------->YAB1                                                                          <--------HAHB4       <-----                                                                         <---------YAB1      --------                                                                     --------->ANAC58  <-----------GT1                             <------------CBF                        --------->ANAC46 <-----------GT1                 >>>>>>>>>TBF1        <------ZmHOX2a(1)    --------->ANAC46 <---------YAB1------->GAMYB               *TSS        <---------YAB1             <---------YAB1 --------->ANAC58<---------AHL20(2) <------ZmHOX2a(1)         ------->TEIL          ----------->GT1     --------->ANAC55(2) --------->ZAT6   agaggaattgaatttggaagaagaagatgaatattggagaggaaatgagaaatgttattacaaacaagtccacgtattattatttattttaacagtcgcc  22315100                                              <---------ANAC46                --------->ANAC58                                              <---------LBD16          <---------ANAC58                                  <---------AHL20(2)              <----------DOF2                                  --------->AHL20(2)              <---------DAG2                              --------->AHL20(2)     --------->MYB46(3)<---------ANAC58                          ------>ZmHOX2a(1)  <---------LBD16     <---------ANAC58 -NtERF2               ---------->ID1     ------->TEIL           <---------ANAC58        <----------DOF2 ->RAP2.6(2)----------->GT1   <---------AHL20(2)--------->LBD16<-----------GT1--------->ANAC58   cttatatttctaatttgttaattttgtcctaaatatttaaaatgagcctcggggaaccattgtttttgctttttcgtccccagcaaaatggctatatgtt  22315200                                                           <--------HAHB4                                                           <---------ICU4                                                           --------->YAB1                                                   <---------TOE2(2)                                                --------->YAB1                                             <----------DOF2                                          --------->ARR14(2)                                          <---------ARR14(2)                                          <---------ARR11(3)                                          --------->ARR11(3)                            ----------->GT1 ------>ZmHOX2a(2)                                      <-                          <------ZmHOX2a(1)<------ZmHOX2a(2)                                      <--                          =========================HOX2a_HOX2a                         <---------ZAT14                          ========================HOX2a_HOX2a                          --------->ZAT14                --------->ICU4            <---------AGP1  <---------ATHB12         <-----------GT1---              --------->CCA1(2)    --------->AHL20(2)--------->TOE2(3)<---------MYB46(3)          ---         ---------->DOF2<---------TOE2(3) --------->AGP1--------->WOX13(1)   ------------>CBF    <---   tgataaaaaaaaaaagacatgagtataaggatgaaaataaaacagatctttcatatgttaatcattttttggtgattacttcaatatactgtacaaaatg  22315300                                                                                           <---------YAB1                                                                                        <----------DOF2                                                                                      <---------RVE1(1)                                                                                      <------ZmHOX2a(2)                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                     --------->AGP1                                                                                     --------->ARR11(3)                                       ----------->GT1                               <---------ARR14(3)                                      --------->DAG2                                 --------->ARR14(3)        <---------LBD16         ----------->GT1                                      <---------AGP1       <---------ANAC46         --------->ANAC58                       --------->ATHB12------>ZmHOX2a(2) --------At4g35610              --------->ANAC58                    <---------ANAC58 <-----------ARR10 -------ARR14(2)              --------->CCA1(2)                     <---------ANAC58 <---------ARR11(3) ---->TEIL----------->GT1    --------->ARR11(1)             <---------ANAC55(2)     <---------CCA1(2) ------>ARR14(2)            --------->YAB1  ------------>CBF<---------ANAC46 <-----------RAV1(1)  --- ------CCA1(2)  --------->AHL20(2)   ---------->DOF2        --------->ANAC55(2)    ----------->ARR10   tatctgattttgtggaaaaaaaattcagaatgatacgaaaaaagtaaacaatatgtggaactacgtatgggcttgattactggggcagatcttttgattc  22315400                                                                       --------->ATHB12                             ----------->RAV1(2)                      <-------TEIL                             --------->At4g35610               ----------->GT1                           <---------ALFIN1             <---------------AGL15                        ------>ZmHOX2a(1)               --------------->AGL15            --------->At4g35610                    --------->ARR14(2)                 ----------------->AG              ----------->RAV1(2)                    <---------ARR14(2)                 <-----------------AGL1          <---------ALFIN1                   <---------GLK1(1)                   ----------------->AGL1     --------->TOE1(3) --->NtERF2     <---------ZAT18                 <-------TEIL  ----------->GT1     --------->TOE2(3)   ggcccatacattatgcagtgcaaatcctaacacctgagccatgaactacatacgtttgccaagttgggaaaattcatttgaaaaccctaacacctgagcc  22315500  Previous    Next  AGI:  At1g60560.1    Description:  SWIM zinc finger family protein. similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G13970.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76964.1); similar to hypothetical protein OsI_029781 [Oryza sativa (indica cultivar-group)] (GB:EAZ08549.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60858.1); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527) Range:  from: 22312237    to: 22315015    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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