Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------AHL20(2)            --------->AHL20(2)     <-----------GT1 --------->AHL20(1) --------->AHL20(2) <---------AHL20(1) ------->AHL20(1) --------AHL20(1)                             --------->ANAC46--------->MYB52(1) --------AHL20(2)                            --------->HSFC1(1) -----AHL20(2)   --------------->AtSPL8      <---------HSFC1(1) ---->AHL20(2)<---------AHL20(2)             --------->HSFB2a(2) --->AHL20(2)--------->AHL20(2)              <---------HSFB2a(2)                       <---------CCA1(2)   aaatattttaccaatttaaattgtactcgacaaaaaaaaaacttgttctcgaaactatggagaataacgaggtaatgggatgaaatttcatatcacaaac  22303100                                    ----------->GT1                                    <---------------------WRI1                                   ------>NtERF2                                  <---------RAP2.6(2)                                 --------->RAP2.6(3)              <---------AHL20(2)           <---------MYB46(3)   <---------WRKY18(1)         --------->YAB1                     ------        <---------ANAC58       ----------->HVH21            ----------->GT1    <---------AHL20(2) ---        <---------ANAC46       --------->WRKY12      ----------->GT1<-----------GT1           <------        --------->YAB1 ---------->DOF2              --------->CCA1(2)  ----------->GT1        <------        <---------ANAC58      ------>ZmHOX2a(1)---------->DOF2    --------->AHL20(2)         <-------   ttgcaatctatcgtggttcaaactacaaagtccttgacggctaaaaaatcaaagatagaaaatagtaatttaacagttaaatttatctcttgtactccgt  22303200   <-----------GT1 --->LBD16  <-----------RAV1(2)                              <----------DOF2 ------->DOF2 <---------At4g35610                         <---------ARR11(3) ---ANAC46--------->TOE1(3)                               --------->ARR11(3) ---ANAC55(2) --------->At4g35610                    <---------ATHB12 --LBD16  --------->TOE2(3)                      ------------>CBF              <-----------GT1   aaaagttacaaacctcagatgtcaacatttacatctatctcttgttcttaaaacaatgaagaactttcaaacttctacatttaaccaaaaaaaaaacttt  22303300                                                        <-----------HVH21                                               <---------ATHB12                                              --------->GLK1(2)   -------->P                            ---------->DOF2------------>CBF       ------>MYB83<---------ZAT14                           --------->AtMYB61 --------->WOX13(1)  ----------->RAV1(1)                 ----------->GT1         --------->ANAC58       --------->AtMYB61                ----------->GT1          --------->ANAC46      --------->MYB46(3)              ---------->DOF2   <-----------HVH21  ----------->TBP------>MYB46(1)        <----------DOF2 <----------ID1   --------->ANAC58   --------->MYB46(3)--------->ZAT14<-------   caaacttcttctttgtaaaagttaaaacaccaaaggtcaccacaagccaatctataaatgtcaccaccaacatgagtctcttcactcactaaaaactttt  22303400                            <XXXXXXXXXXXXXXXXXXXMIR156G                        ------>ZmHOX2a(1)                <---------MYB52(1)               <----------DOF2                                                           <---------AHL20(2)               ------>ZmHOX2a(1)                                                  --------->YAB1       <---------At4g35610  <XXXXXXXXXXXXXXXXXXXMIR156A-F                --------->ARR11(3)      ------->TEIL  <-----------GT1                                      <---------ARR11(3) ---DOF2      --------->TOE2(3)     <----------DOF2              <------NtERF2   <---------ATHB12   cttctctgcatctaatcctttatttcctctctcactctcttttgtttatactcgtgcaaaaatgggaggcagtaagatgtccaatgactatgaaattgat  22303500                                                                                ------>NtERF2                                                                             ------>ZmHOX2a(2)                                                                             <---------LBD16                                                                             --------->ATERF1(1)                                                                            <------ZmHOX2a(2)                                                                           --------->ARR14(2)                                    --------->ANAC58                   ----------------->AGL1                                 ------->GAMYB                         <---------LBD16 <---------ANAC58                                <---------ALFIN1                       <-----------------AGL1     ---    --------->TOE1(2)          <---------REM1(2)                      --------->MYB52(1) ----------->HVH21   --------->At4g35610       <---------WRKY45                        <---------WRKY18(1)<---------WOX13(1)   <---------ZAT2            <---------WRKY38(1)                    ----------->HVH21  <---------ANAC58   <---------At4g35610      <<<<<<<<<WRKY6---------->DOF2   --------->At4g35610--------->LBD16    <--   --------->ZAT2  <----------DOF2  --------->ANAC58      --------->YAB1   <---------ARR14(2) <<<<<<<   gtcgaagctgggatgtcttctctttctatagtcaacacacccattgaagcaccaattgtatcatcttacaatgaccggatccggccattgcttgacactg  22303600                                              --------->ANAC46                                         <---------GLK1(2)    <------MYB83                                        --------->ZAT2        <------MYB46(1)                                        --------->At4g35610 <--------P                                        <---------ZAT2    <---------MYB46(3)                                     ------>ZmHOX2a(2)    --------->MYB111(2)                                    <------ZmHOX2a(2)     --------->MYB55(2)                       <- ------>ETT(2)          <---------YAB1  <---------At4g35610<-------GAMYB                 <---------ZAT14 -------ETT(2)--------->TOE2(3)    --------->ARR14(2)    <---------AtMYB61             >>>>>>>>>TAC1 <<SUP        --------->TOE1(3)    <---------ARR14(2) <---------AtMYB61               <---------ANAC46   tcgacagattgagaaacctgaatgtgatgagagaagggatccagcttcccaccattgtggtggttggagaccagtcttcagggaagtcgagtgttcttga  22303700                                          --------->STY1(1)                                          <---------STY1(1)                                      <---------ZAT18                                      --------->ZAT18                                      <---------ZAT14                                   --------->At4g35610                                  --------->GLK1(2)                                 ----------->HVH21                                 <---------GLK1(2) ------>ZmHOX2a(1)          <---------ALFIN1                              --------->ANAC58 <---------ARR14(2)         --------->ZAT2                      <---------ANAC46--------->ZAT14                     <---------At4g35610                      --------->O2--------->ARR14(2)                 <---------At4g35610        <------ZmHOX2a(1)     --------->ANAC58 --------->ARR14(2)    --------->At4g35610            < --------MYB46(3)     <---------O2<---------ARR14(2)     --------->YAB1   --------->At4g35610  ------   gtcgttggcaggaatcaatttgcctcgtggacaaggaatctgcactagggttcctctagtcatgaggcttcagcgaagctccagccctgaaccagagatt  22303800                                             <---------At4g35610                                            <---------DEAR3(1)                                          <-----------HVH21                                         <---------O2                                         --------->O2                                         --------->ANAC46                                         <---------TGA1a                           <--------P                                         --------->TGA1a                       <---------ANAC58                                         --------->bZIP60(2)                <---------WOX13(1)               ====================================bZIP_DOF               --------->ATHB12           ----------->HVH21             --------->ANAC58                <---------YAB1         ----------->GT1                 --------->ANAC58          --------->MYB46(3)       <---------ZAT14        --------->At4g35610           --------->At4g35610<---------ANAC58 ---------ANAC46          ----------->RAV1(1)--------->At4g35610 ----------->RAV1(1)       <--------- --->CCA1(2)   ---------->DOF2<---------At4g35610           <---------At4g35610<---------ANAC46   tggctggaatacagtgacaaagttgttcccacagatgaagaacacgtcgctgaagctatttgtgctgcaacagatgtgattgctggtaagttttctctct  22303900                  <---------ANAC55(1)             <---------ZAT6                <---------ANAC55(2)           <---------ANAC46               <-------TEIL                                             <-         <---------ZAT14           --------->DAG2                             --------->ATHB12     <-         --------->ZAT14    <---------At4g35610                           ------>ZmHOX2a(1)       --- ------>ZmHOX2a(1)<---------ANAC46---------->DOF2 --------->AHL20(2)     --------->TOE2(3)        <-- --GT1   --------->REM1(2)  --------->At4g35610--------->WOX13(1) <----------DOF2          ----------   ctccttctcagtgtagtgttaagtgtgttttgctgcaaaagtgatacataaatcaaatagaatgcgacctttaatcctaaacattggaccttagaaagga  22304000  Previous    Next  AGI:  At1g60525.1    Description:  other RNA Range:  from: 22303206    to: 22304970    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g60530.1    Description:  dynamin family protein. similar to dynamin family protein [Arabidopsis thaliana] (TAIR:AT1G60500.1); similar to Os03g0260000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049617.1); similar to hypothetical protein OsI_010555 [Oryza sativa (indica cultivar-group)] (GB:EAY89322.1); contains InterPro domain Dynamin, GTPase region; (InterPro:IPR001401); contains InterPro domain Interferon-induced Mx protein (InterPro:IPR015577) Range:  from: 22303462    to: 22304832    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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