Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ARR14(2)                                               --------->At4g35610 <-------MYC2                                               <---------ZAT2      ------->MYC2 -------ICU4                                   <---------At4g35610 <-------MYC3          --------->ANAC58 ------>YAB1                     ------>ZmHOX2a(1)     --------->ETT(2)  <---------ARR14(2) ------YAB1                     --------->TOE2(3)      <---------ETT(2)  --------->GLK1(2) -----ARR11(3)              --------->YAB1     --------->ZAT2      ------->MYC3          --------->ANAC58 ---->ARR11(3)             <---------ATHB12 <---------MYB52(1)  <---------ALFIN1   <---------TOE1(2) >YAB1<-------TEIL    --------->GLK1(2)    <-----------HVH21   --------->ANAC46   <---------AtLEC2   tcatgaagtacatcgagcctcaagaatcaataatcctcaatgttctgtcagctacggtcgacttcaccacatgcgaatccattcgcatgtcaagacaagt  22304600                                                        --------->ARR14(3)                                                        <---------ARR14(3)                                                   ------>ZmHOX2a(1)                                          =============================================MYC_MYB                                          ====================================bZIP_DOF                                          <---------TGA1a          ---------->DOF2         --------->ARR14(2)                                          <---------O2  <---------ARR11(3)                 <---------ARR14(2)                                 ===================bZIP_DOF--------->At4g35610            --------->GLK1(2)                         <-------GAMYB ----------->HVH21--------->ARR11(3)   <-----------RAV1(2)                         ===========================MYC_MYB ----------->RAV1(2)--------->At4g35610                        <---------MYB46(3)<---------bZIP60(2) ------>ZmHOX2a(1)<---------At4g35610           --------->MYB52(1)    ---------->DOF2 ----------->RAV1(2)      <------------AtMYB77      -          <---------WRKY38(1)----------->HVH21   --------->At4g35610    --------->MYB52(1) --------->MYB52(1)   tgacaaaactggtgaacggactctggctgttgtgacaaaggctgacatggctcctgaaggtctcctgcagaaagtaactgcagatgatgtgagtatcgga  22304700                                                                   <-----------GT1                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                                --------->ARR14(2)                                                            <------ZmHOX2a(1)                                                         <-----------RAV1(2)                                                        <-------TEIL                                                        <---------ZAT14                             <                                                       --------->ALFIN1                           ---                            <------ZmHOX2a(1)        <---------ANAC58                <---------ALFIN1     --------->REM1(1)  --------->ARR14(2)           <---------ANAC58        <------ZmHOX2a(1)   <--- ---------->GT1         <---------ARR14(2)     --------->GLK1(2)<---------ARR14(2)  --------->MYB46(3)   ctaggttacatctgtgttagaaaccgtataggagaagagacatatgaagaagctagggtgcaggaagatttactcttcaggactcatccactgctaagtt  22304800                                                           <---------ARR14(2)                                                          <------NtERF2                                                         --------->LBD16                                                       <------NtERF2                                                       <---------LBD16                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                                --------->GLK1(1)                                 ---     ----------->GT1                            <---------GLK1(1)                                ---- ---------WOX13(1)<------NtERF2               <------ZmHOX2a(1)----------->GT1         <---------MYB46(3) ------>ATHB12  --------->ETT(1)        <---------ANAC55(2)--------->ARR14(2)      <------ZmHOX2a(1) ------YAB1    --------->RAP2.6(3)    --------->AHL20(2)<---------ANAC46      --------->ALFIN1 ------   tgattgatggtgacattgtcggcatcttgtgaacattcaattacatgaggagatcgtggcggaattggtgaattcaagtagtggaggagtagttgagaag  22304900                        --------->ANAC58                      <---------ANAC58                      <---------ANAC58                      <---------ANAC46                     <------NtERF2                    ------>NtERF2                                                         <----------                   --------->ALFIN1                                                    ------>NtERF2                   <---------DEAR3(1)                                                  <------NtERF2                  --------->ATERF1(1)                                                 ------>NtERF2                  <-------GAMYB                                                       --------->RAP2.6(2)                 <---------MYB46(3)                                                  <---------ANAC58                 <---------DEAR3(2)                                                  <---------ATERF1(2)                <---------MYB46(3)                                                   <---------RAP2.6(2)                <---------At1g77200                                                  <---------ANAC46                <---------DEAR3(1)                                                   --------->ATERF1(2)          <---------ARR14(2)                                                         <---------DEAR3(1)          --------->GLK1(2)                                                          <---------ANAC58          --------->ARR14(2)                                                        --------->RAP2.6(3)      <------ZmHOX2a(1) --------->ANAC58                                          --------->ALFIN1 ------>GLK1(2) <---------DREB2C(2)                                   *TSS  --------->ARR11(3) ----->ARR11(3)<---------MYB52(1)               ----------->GT1   <------ZmHOX2a(1) --------->ATERF1(1) ----->ARR10  <-----------HVH21      --------->GLK1(2)     --------->At4g35610  <-----------RAV1(1)   atgctggaggagtatccgtcggtggcgagcaagagggagaagcttaagaacagtatcaagcttctgaaggagtccaaggatgttgtggcggccattgttg  22305000                                                                                              <------                                 <---------ANAC58                                             <------                                 <---------ANAC58                                             <------                             <------------CBF          <---------ANAC46           --------->CCA1(2)                     <-------GAMYB                     <---------ANAC58          --------->ARR11(1)                    ------>ZmHOX2a(2)                  <---------ANAC58          --------->ARR11(3)                   <------ZmHOX2a(2)               <---------DEAR3(2)            <---------ARR14(2)                  <---------ARR11(3)               <---------MYB46(3)          <---------TOE2(3)                  --------->ARR11(3)              --------->ETT(1)             <---------TOE1(3)    --------->ARR11(3)     ------>ZmHOX2a(2)    <-----------HVH21         <----------DOF2   <-------- --CBF           <---------GLK1(1)            <---------DEAR3(2)  --------->CCA1(2)      <----------DOF2   atcagagctcttgatatggagatcgttgatctattgcttcacataagtcgggtcgggtcgtgttttagatttgggccttttaagatttgggcttttgtgt  22305100                                                         <---------TOE2(3)                                                        <---------ICU4                                                       --------->ICU4                                                  ----------->GT1                                                  <------MYB83                                                  <------MYB46(1)                                                 --------->MYB111(2)                                                 --------->MYB111(1)                                                 <---------MYB46(3)                                                 --------->MYB46(2)                                                <---------MYB55(1)                                                <--------P                                                <---------ANAC46                                               <-------GAMYB                                              <---------MYB46(3)                  <----------DOF2             --------->MYB55(2)                                    <             --------->GLK1(1)               <---------AtMYB61           --------->ANAC58  --------->DOF5.7(2) ---ANAC58  --------->ARR14(2)             <---------ANAC46              --------->ANAC58 --------->TOE2(3) ---ANAC46  <---------ARR14(2)             <---------ANAC58    --------->ZAT6             --------->TOE1(3) ---ANAC58  <---------GLK1(2)              <-----------RAV1(1) --------->ANAC58      <----------DOF2< -ANAC46<---------LBD16                    <---------ANAC58    --------->ANAC58 ---------->DOF2<-----   gttttgaattttcggattttctttgtttatgttttcaatcttcttgtgtggttggtaataatgtaacgctaagctaagctagtaaagctttacgttaatg  22305200                                                                          <---------AHL20(2)                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                       --------->CCA1(2)                                                                      <---------ARR11(3) <----------DOF2                                                 <------ZmHOX2a(1) <---------GLK1(1)                                         --------->ANAC58 ---------ANAC58                             --------->AtLEC2--------->TOE1(2) ---------ANAC58                  <---------AHL20(2)       --------->ANAC58 ------RAV1(1)---------->DOF2     --------->AHL20(2)   --------->YAB1 --------->ARR11(3)   tggctttcccgttttataaagtctcttaaattctaaataaatacttcattcaaactttcataagctaggaaagatttaaattgaagtttaaaatatgttt  22305300                                                      <------ZmHOX2a(2)                                                      ===========================HOX2a_HOX2a                           <XXXXXXXXXXXXXXXXXXXXMIR1886.3     <---------MYB46(3)     <-----------GT1               <---------ICU4                        --------->AGP1---------->DOF2  <-----------GT1               --------->YAB1                        --------->ARR14(2)   ------>ZmHOX2a(1)         <             --------->GLK1(2)                       <---------ARR14(2)  --------->TOE2(3)      <----   tctgaaaacatggagaatcatgagatagtgggatgaaagttttgatcacaaacccgatctatggtggttcaaagtccttaatggttttaacttcttaact  22305400                                                                               --------->TOE2(3)                                                                             <---------ARR11(3)     --------->ARR14(2)                                                <----------DOF2     <---------ARR14(2)                                                --------->TOE2(3)     <---------GLK1(2)                                              ------->TEIL -----------GT1                               <-----------GT1 <-----------RAV1(1)           --------- ------DOF2                              ----------->GT1  <---------DAG2     --------->ARR11(3)    --   tttaacagatttgaacaaaaaaaaaaaaaaaaactttgaacagaagttaaaccatgtccaatttttgttgcatctttaaaatcttaagaactacgatatt  22305500  Previous    Next  AGI:  At1g60525.1    Description:  other RNA Range:  from: 22303206    to: 22304970    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g60530.1    Description:  dynamin family protein. similar to dynamin family protein [Arabidopsis thaliana] (TAIR:AT1G60500.1); similar to Os03g0260000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049617.1); similar to hypothetical protein OsI_010555 [Oryza sativa (indica cultivar-group)] (GB:EAY89322.1); contains InterPro domain Dynamin, GTPase region; (InterPro:IPR001401); contains InterPro domain Interferon-induced Mx protein (InterPro:IPR015577) Range:  from: 22303462    to: 22304832    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version