Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <----------DOF2        ---------->DOF2--------->AHL20(2)              <------ZmHOX2a(2)      --------->DAG2          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           --------->At4g35610     ---------->DOF2       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <---------At4g35610----   --------->ARR11(3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <-----------HVH21    ------ -------->DOF2   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               --------->AHL20(2)   <xxxxxxxxxxxxx   aaaaagataaagcttttgttttcttagacataacccaaagaacataccatatatatagcagaattagattaaaaacagtcagatcagaaaacaaaacaat  22265200                                                                     ------>ZmHOX2a(1)                                                                   ------>ZmHOX2a(2)                                             --------->LBD16     --------->ARR14(2)                                      <---------ARR11(3)         <---------ARR14(2)                                      <---------GLK1(2)      <---------At4g35610                                      --------->ARR14(2) --------->LBD16                                      --------->ARR11(3) --------->ANAC46                                      <---------ARR14(2)<---------LBD16                  --------->DAG2     =====================================HOX2a_HOX2a         <------ ----->YAB1--------->ZAT18           <------ZmHOX2a(1)  <---------ANAC46                   <--------- --->GLK1(2)     ---------->DOF2   <---------TOE1(3)   <---------LBD16              ---------->DOF2 xxxxxxxxxxsmallRNA(le3)           <---------TOE2(3)  --------->MYB52(1)        --------->ETT(2)    -   ctgaatagctaattgcacaaaaagctagggttttgttaaggattttccgagtttaataccgggaactgatcctcgtgaattgtcgagatagcgcttaatg  22265300                                                                            <----------DOF2          <---------AHL20(2)                                                <---------DAG2         --------->AHL20(2)                                 <---------RVE1(1)      <---------AHL20(2)                                    <---------CCA1(1)     --------->ICU4 ------->GAMYB                          --------->ARR11(3) ---TOE2(3)   --------->YAB1                     --------->ANAC46     --------->At4g35610      <----- -DOF2--------->AHL20(2) --------->ARR14(2)    <-----------GT1        <---------At4g35610     ------- ---------->GT1  <-----------GT1     <-----------GT1       <---------ARR11(3)      <---------ZAT6   ttttgtaaatatttaatattaaccccaaatattcgattttgaccaatttataccccatcgagatatttctactgctgactttttagtgttttgtatttga  22265400                                       --------->WRKY18(1)                                     <------MYB46(1)                                    <---------MYB46(3)                                    <---------AtMYB61                                   <--------P                                  <---------ANAC58                                  <---------ANAC58                                  <-------GAMYB                       <---------AHL20(2)  <---------ATHB12                       <---------YAB1<------MYB83                      <---------AHL20(1)<---------WRKY45                      --------->AHL20(2)<---------WRKY12                 --------->LBD16 <------MYB46(1)               <---------LBD16   --------->ATHB12              --------->MYB52(1) --------->MYB55(2)              ------->TEIL       <------MYB83             <---------ARR14(2)  --------->MYB52(2)                        --------->AHL20(2)       <---------WOX13(1)        <---------MYB46(3)                        <---------AHL20(2)    <---------MYB46(3)--------->AHL20(1)<---------WRKY38(1)            <---------AHL20(2) ------GT1   --------->ARR14(2) <---------AtMYB61                      --------->AHL20(2) ---->HVH21 <---------SPL7   <-----------RAV1(1)      <-----------GT1<----------DOF2            <----   cctcgtttgatggacgaaccggaatataattgtgttggttggtcaaccatttgtttttagcattttctggtctttaattaatcgctaagtaatctaattc  22265500                                                                                                    -                                                                                               <-----                                                                                            <--------                                                         <---------ANAC58                   <--------                                 <----------DOF2    <---------ICU4    ---------->DOF2       <--------       ----------->GT1      --------->CCA1(2) <----------DOF2---------->ID1            -------------- -----LBD16            ---------->DOF2<-----------GT1*TSS<---------ANAC58       --------->ANAC46    -   tggattaagaagaaaaaaaaacttcaaaagagacgcttttatacaacgctttgagcattacttggccctctcaaaagaatacacagaccagtcttcgtgt  22265600                                                                                    ------>ZmHOX2a(2)                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                      <------NtERF2<------ZmHOX2a(2)                                                                     ------>NtERF2<---------ARR14(3)                                                                    <---------DEAR3(1)                                                               --------->MYB52(1) --------->ARR11(3)                                                              <---------WRKY45    --------->ARR14(3)     <---------WOX13(1)                                       <---------WRKY12    <---------ARR11(3)   --------->ATHB12                <<<<<<<<<<<<<<<<<LFY       <---------WRKY38(1)<------ZmHOX2a(1) -------->ANAC58                   --------->ANAC46        --------->ANAC58      <---------GLK1(2) ----ZAT18  --------->GLK1(2)   --------->SPL7         --------->ANAC58       <-----------RAV1(2) -ANAC46   <---------GLK1(2)--------------->AtSPL8     --------->ANAC58       <---------LBD16 -ANAC58   <---------ARR14(2) --------->LBD16  <---------ARR14(2)   --------->DEAR3(1) -ANAC58   --------->ARR14(2) <---------SPL7   --------->ARR14(2) ------->GAMYB<---------TOE1(2) --------->TaNAC69(2)     ------>ZmHOX2a(2)  <------NtERF2 --------->ANAC58------>NtERF2         <--- -------->ANAC58         <---------GLK1(1)  --------->RAP2.6(2)<---------DOF5.7(2)<-----------ARR10   gctcgtaattggcgattctcaaattcgatctccgtacaaacaatggccgaaacctcgaagcaagtcaacggcgacgatgcccaggatcttcactcgcttc  22265700                                    <------NtERF2                                   ------>NtERF2                                  <---------RAP2.3(3)       --------->TGA1a                                  <---------DEAR3(1)        --------->O2                                --------->MYB52(1)          --------->bZIP60(1)                               ----------->HVH21            <---------bZIP60(1)                               ----------->TGA1             <---------TGA1a                <---------GLK1(1) <---------ANAC46          <---------ANAC46       --------->LBD16         --------->ICU4               <---------O2       ------>NtERF2 ------>ZmHOX2a(1)    ----------->GT1   --------->ANAC55(2)                  <---      <---------DEAR3(1)     <---------ICU4----------->GT1  <---------ANAC55(2)        --------->ANAC58     <---------LBD16--------------------->WRI1              <---------ANAC58           --------->ANAC58 -------DOF2    --------->GLK1(1)--------->RAP2.6(3)        <---------ANAC58           ------>ZmHOX2a(2)   tttcttctccggcgagggatttcctcgttcgtaatgacggcgaacaggtaaaatagtttttgacgtgattttgagtttatggtcttcgatcgcaacttct  22265800                  ------>ZmHOX2a(1)               <------ZmHOX2a(2)              <---------ARR14(2)              --------->ARR14(2)              --------->ARR11(3)             ------->GAMYB          <---------DOF5.7(2)        --------->DOF5.7(2)                   ------>MYB83       --------->HSFB2a(2)                    ------>MYB46(1)                             --------->ATHB12   ------>ZmHOX2a(2)             <---------GLK1(2)                                    --------->ATHB12   ======================HOX2a_HOX2a        --------->DEAR3(1)               <---------ANAC58 <---------ARR11(3)    <---------WOX13(1)  --------->DEAR3(2)                <---------ANAC58 --------->ARR11(3) <---------YAB1         --------->MYB46(3)                <---------ANAC46 ------At4g35610 --------->TOE1(2)--------->GLK1(2)                         <-------TEIL<---------WOX13(1)   tctgatcttcgataacgatcctgtgattgtctcgcgattctttgaaccgactcttctggtttacagaatatagatagcttcgtgtagttgattgatttgc  22265900                                                            --------->ATHB12                                                        --------->ATHB12                                <---------TOE2(3)     ------>ZmHOX2a(1)                                <---------YAB1        <----------DOF2             <---------O2      <                    <----------DOF2           <---------ANAC58                  <-----------GT1 <----                   <---------ANAC58           <---------ANAC58         <---------ANAC46    <---------                   <---------ANAC58 <-------TEIL <------MYB83      <---------ANAC58    <---------ANAC46              --------->ATHB12  <---------TOE1(3)<------MYB46(1)   <---------ANAC46    <---------ANAC58       <----------DOF2     <---------ZAT6    <---------MYB46(3)    <---------ANAC58    <---------ANAC58   tatagatgactttaatcgattgctttcaagtgttaagattcattcagtgcttggtcctttattgatttggcttgtgtctatttcacatggcttatgttgt  22266000                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                <----                                                                                              <------MYB83                                                                                              <------MYB46(1)         <---------AHL20(2)   --------->YAB1                                               <---------ANAC46         --------->AHL20(2)  <---------YAB1                                                <---------ANAC58     ----------->GT1     --------->AHL20(2)         <---------At4g35610                    <---------ANAC58     <---------ZAT6      <---------AHL20(2)         <---------ZAT2                     <---------ZAT2 ---------ANAC46      ------->TEIL        ---------->DOF2                              <---------At4g35610 -----ANAC46 <---------AHL20(2)      <---------TOE2(3)      <---------HSFB2a(2)        --------->ZAT2 --RAV1(1)   --------->AHL20(2) <---------YAB1 ----------->HVH21    --------->ATHB12   --------->At4g35610   ttgggtagagtttaattttttatgcatttttatgatgtttaggtgaaagttgacagcttgttagggaagaagattggattgtatttttcagctgcttggt  22266100  Previous    Next  AGI:  At1g60420.1    Description:  DC1 domain-containing protein. similar to electron carrier [Arabidopsis thaliana] (TAIR:AT4G31240.1); similar to electron carrier [Arabidopsis thaliana] (TAIR:AT4G31240.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66081.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66082.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77321.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thio Range:  from: 22265553    to: 22268073    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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