Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                   ----------->GT1                                                      --------->ANAC46          --------->YAB1 <---------ICU4                                        <---------AHL20(2)  --       <----------DOF2  --------->ICU4       --------->YAB1                   --------->AHL20(2)<---- ------>TEIL   ---------->DOF2              --------->AHL20(2)            <---------MYB52(1)  <------ --------CCA1(2)--------->DAG2       <-----------GT1----------->GT1  <-----------GT1<-----------GT1--   tgtatctctctttcataaaaagtgtaattttgacacatttcacacattaaaaatgagttaaacatacaaatatacccttatttaatatacccctaattat  22262200       <---------------AGL15     --------->ATHB12    <---------YAB1    --------->ICU4  <---------ICU4  --------->YAB1                               <---------ARR11(3) --------->ICU4                                --------->ARR11(3)                  ----------->GT1 -->YAB1 --------->AHL20(2)                    --------->GLK1(2)               <---------AHL20(2) ------->TOE2(3)                               --------->ARR14(2)            <---------YAB1 -------GT1             <----------DOF2    <------ZmHOX2a(1)                 <---------AHL20(2) ---ICU4 <---------AHL20(2)               ----------->GT1 ----------->GT1 <---------ARR11(3) ------->YAB1 ----------->GT1  <----------DOF2 <---------ARR14(2)     <---------DOF5.7(2) -----------   accataatgatttaaatagaaaatttcttttagctttagacaagaggaaaatctgaaaactagttaaaatgtaaacgatattattttgtgaattgtgaaa  22262300                                                                                            ---------                                                                                            <--------                                                                                          --------->YAB1                                  <---------ARR14(2)                                      <---------ICU4                                ----------->GT1                                          --------->ICU4                             ------------>MYB.PH3(1)        <----------ID1               <---------ATHB12                             --------->MYB52(1)           ---------->DOF2         <xxxxxxxxxxxxxxxxsmallRNA(s)                    ----------->GT1            <----------DOF2  ---------->DOF2  --------->AHL20(2) >GT1             ----------->GT1 --------->ARR14(2)<---------YAB1  ----------->GT1    --------->WOX13(1)   cggatagaattgaacaagagttgagaaaaaaaaacggatacaatttgagcttttattcttgaaagacaaagagttaacaaaaaaaaaatcaatcatgagt  22262400                                           --------->ATHB51                                           <---------ICU4                                          <---------YAB1                                   <---------ANAC55(2)                             --------->AHL20(2)                         ----------->GT1                       --------->At5g28300--------->ICU4            --------->AHL20(2)                      ----------->GT1   --------->YAB1              <---------AHL20(2)             <-                     --------->ZAT6--------->ANAC55(2)      --------->DAG2          --------->AHL20(2)                   <-----------GT1<-------TEIL     <---------WOX13(1)<---------AHL20(2)  --------->YAB1 >ICU4         <---------------AGL15   <---------YAB1      ---------->DOF2    <---------AHL20(2)   <- -YAB1    <----------DOF2    <---------AHL20(2) <---------YAB1  <-------TEIL  --------->AHL20(2)   <-   atttcaagtattcttttatattaacagtaaattaaatacatatcattatttcgattgacaataaagttcattaaatgtaattaaaaaaaaatcacaacgt  22262500                                                       <---------ANAC46                                                   ------->MYC3                                                   <-------MYC3                                                  --------->TGA1a                                                  <---------O2                                                  --------->O2                                                  --------->ANAC58                                                  --------->ANAC58                                                  --------->ANAC55(2)                                                  <---------ANAC55(2)                                             <---------O2                                             --------->TGA1a                                             <---------TGA1a                                             --------->ANAC58                                             --------->bZIP60(1)                                             ================================bZIP_DOF                 --------->ARR11(3)          --------->O2              --------->AHL20(1)             --------->ANAC46              <---------AHL20(1)             --------->ANAC58              --------->AHL20(2)        <---------At4g35610              <---------AHL20(2) ======================bZIP_DOF                        ----------->TBP    <---------ANAC46             ---------->DOF2  ===========================bZIP_DOF  <---------YAB1 <---------MYB52(1)              ===========================bZIP_DOF  <---------AHL20(2)--------->YAB1 --------ANAC58  <---------AHL20(1)     --------->At4g35610       <----------DOF2    --------->YAB1 --------ANAC58  <---------AHL20(2)   --------->ZAT18  <---------ANAC58             <---------YAB1--- --------ANAC46  --------->AHL20(1)   <---------ZAT18  <---------ANAC58    <-----------GT1     <-----   ttcgttttgtggtcaataaaatattgaagaaatttgaaagggcgctcacgacacgtttcgtatagcctctttttatttttcaacttattataaaaactgt  22262600                          ------>ZmHOX2a(2)                         --------->GLK1(1)                         <---------GLK1(1)                         <------ZmHOX2a(2)                        <---------AGP1                        --------->ARR14(2)                        <---------ARR11(3)                        --------->ARR11(3)           --------->GLK1(2)                          <<<<<<<<<TBF1           --------->ARR11(3)                   <-------TEIL           <---------ARR11(3)                  --------->ARR14(2)           <-----------ARR10           <------------CBF     ------>ZmHOX2a(1)      ----------->GT1   <---------ARR14(3)     *TSS<<<<<<<<<TBF1                                 ----    <------ZmHOX2a(1)   --------->ARR14(3)   <---------HSFC1(2)                                  <---    ============================HOX2a_HOX2a  --------->HSFC1(2)                           ------>MYB46(1)    =============================HOX2a_HOX2a --------->HSFB2a(1)                        --------->TOE2(3) ------->DOF2           <-----------ARR10   <---------TOE2(3)       <---------------AGL15 ------>MYB83 ------HVH21            <---------ARR14(2)  <---------TOE1(3)      --------->ZAT6       <---------MYB59   caaagaggaagaaaatctagcgagaagatctctggtcgtcaaattgaaggttcttcttcttcctctctatctctactaggtaatctctaacctaatctct  22262700                                             <---------AHL20(2)                                             --------->AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                                         <---------AHL20(2)                                         --------->AHL20(2)                      --------->LBD16                                         <---------AHL20(1)                     --------->LBD16                                         --------->AHL20(1)                    --------->HSFB2a(2)                                   --------->YAB1                              <---------HSFB2a(2)                                  <---------AHL20(2)                           <---------LBD16                                  --------->AHL20(2)                          <---------LBD16        --------->YAB1        <---------AHL20(2)                            <---------ARR14(2)     <----------DOF2          --------->AHL20(2)                            --------->ARR14(2) ----->ZAT14                 <---------WOX13(1)    <---------REM1(1)       --------->GLK1(1) ------ZAT14          <---------YAB1  --------->YAB1     <----------DOF2   <---------GLK1(1)      <<<   gaactctctttcatactttggattatgtttgattaattaataataaattaatagtgtagctttgtccgaaatatagggtttccgggagaagtcatggcta  22262800                     <------MYB46(1)<---------ANAC58                                     <---------ANAC58                     <------MYB83   <---------ANAC58        ------>ZmHOX2a(1)            <---------ANAC58              ---------->DOF2     <---------At5g28300   <---------ARR14(2)              <-------TEIL           --------->LBD16       <-----------GT1   <-----------HVH21              --------->GLK1(2)         <-----------RAV1(2)   <----------DOF2    <-----------RAV1(1)         --------->ANAC58   <--- <<<<ZML2<---------LBD16---------->DOF2<-----------HVH21--------->ARR14(2)    --------->ANAC58   <---   gaaccgaagtctcagggaaagataggttaagcgatttaccgtgtcatttgctatgtcgcatcctctctaatctctctaccaaggaatcggttcgtactag  22262900                                                              --------->ARR11(3)                                                              <---------ARR11(3)     <---------ZAT18            <---------TOE1(2)     <---------GLK1(1)       --------->ANAC46    ---------->ID1             <---------ANAC58       --------->GLK1(1)       --------->ANAC58 ------ANAC58                  <---------ANAC46--------->ARR14(2)             --------->ANAC58 ------ANAC58                  <---------ANAC58<---------ARR14(2)  ---------->DOF2   cgttttgtcccctcgttggagtaatctctggtcgcttgtttctgttttggatttggatttccaagattttaaaggtgaacacgacatgggagaattcata  22263000                                                                              <---------ANAC58                                                                              <---------AtLEC2                             <---------ANAC58                          <---------ZAT18             --------->ARR11(3)                            <---------YAB1  ------->PIF5           ---           ---------->TaMYB80<---------ANAC58      <---------ARR11(3)  --------->ZAT18           ----   <---------DAG2         --------->MYB59 --------->ARR11(3)  <---------YAB1  <---------ANAC58 <-----   <----------DOF2    <---------ZAT6      <---------ARR11(3)--------->YAB1 <-------PIF5       <------   gatagctttatggaatatcacgaagagttaggcttgaagttgaagagcttcaatatgttttatgatgctaatgagcacttgcatgagccatttgtgagga  22263100  Previous    Next  AGI:  At1g60410.1    Description:  F-box family protein. Identical to Putative FBD-associated F-box protein At1g60410 [Arabidopsis Thaliana] (GB:O80762); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G60400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 22262647    to: 22264380    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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