Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->GLK1(1)                                                           <---------At4g35610                                                           --------->At4g35610                                                        --------->LBD16                                                       <---------DEAR3(1)                                                       <---------ANAC46                                                       --------->ALFIN1 <---------ANAC46                                     ------>NtERF2                        --------->ATHB12 ------>DEAR3(1)               <-----------RAV1(2)    --------->ATERF1(1)               <---------ANAC55(2) -->TGA2(2)              --------->DEAR3(1)           <------NtERF2                     --------->ANAC55(2) ----TGA1               <------NtERF2 --------->At4g35610<------NtERF2        <<<<<<<<<<ANAC019 ----HVH21            <---------DEAR3(1)              <---------LBD16         <<<<<<<<<<ANAC055 -O2                 <---------------------WRI1     <---------RAP2.6(2)       <<<<<<<<<<ANAC072 >O2                 <---------At4g35610            <---------RAP2.3(2)      <---------ANAC58 >TGA2(1)            --------->At4g35610 --------->At4g35610    <---------GLK1(1)       <---------ANAC58 >ANAC46         <---------KAN4(2)    <---------At4g35610--------->ATERF1(1) --------->ANAC55(2) >bZIP60(1)  --------->ANAC46  <---------LBD16      <---------DEAR3(1)       <---------ANAC55(2) -TGA2(1)    --------->LBD16<---------ZAT2         <---------LBD16           <---------ANAC58 -bZIP60(1) --------->LBD16 --------->ZAT2        <---------ANAC46           <---------ANAC46 ->STF1     <---------LBD16 --------->At4g35610   <---------ANAC58           <---------ANAC55(1) --STF1    <---------LBD16  <---------At4g35610   <---------ANAC58 --------->YAB1       <---------ANAC58   tcgccgtgtttttccagggaatgagcggcgagctcagggaagcagaagagtttcgcggcggagcagaaatcagagtgatgcgtgttaagcgcgtgattag  22252900                                --------->At5g28300                                <-----------HVH21                               <---------MYB46(3)                               --------->MYB55(2)                            ------------>AtMYB77                           --------->ANAC46                           <---------DEAR3(1)                          <---------LBD16                        <---------ZAT14                        <---------WRKY12                        <---------WRKY38(1)                  --------->ALFIN1                 ------->MYC3  <---------DEAR3(2)                 <-------MYC3 <---------ANAC46                >>>>>>>>CAMTA3<---------DEAR3(1)       <------ZmHOX2a(1)                      -------                <---------ANAC46<-------GAMYB         ----------->GT1                        <-------      <-----------------------TaNAC69(2)       <----------DOF2        <---------AtMYB61     <--------    --------->ALFIN1    --------->ZAT18<------ZmHOX2a(1)   ---------->DOF2               <---------YAB1   aagcgagtgaggcgaaacgcgtggagtccacggcggttagaggagaggcctttgagaggaaaaaagaaggttttggtgaatcgccattgatgtgattgtt  22253000                                                            <---------MYB46(3)                                                            <---------DEAR3(2)                                                            --------->MYB55(2)                                                           <---------DEAR3(1)                                                          <------NtERF2                                                          <---------MYB52(1)                                                          --------->ATERF1(1)                                                         --------->LBD16                                                         ------>NtERF2                                                         <---------RAP2.3(1)                                                         <---------ATERF1(1)                                                         <---------ERF1                                                        --------->ATERF1(2)                                                        <---------RAP2.6(2)                                                        <---------RRTF1(2)                                                        <---------ATERF1(2)                                                        <---------RAP2.3(2)                                                        <---------RAP2.3(3)                                                        <---------DREB2C(2)                                                        <---------DEAR3(1)                                                       <---------ANAC58                                                       <---------LBD16                                                  <-----------RAV1(1)                                                  <---------REM1(1)                                               ----------->HVH21                                             <---------ANAC46                                             <---------ANAC58 <---------MYB52(1)     ------->TEIL                                 --------->ARR14(2)    <---------ANAC58    --------->LBD16        ---  --------->MYB52(1)             <---------ARR14(2)    --------->ATERF1(1) ------>NtERF2          --- <---------ATHB12       <---------ANAC46     <---------ANAC58<-------GAMYB<---------DEAR3(1)      --- -->KAN4(2)          <---------AtMYB61       --------->ANAC55(2)         <---------LBD16      ------- --MYB46(3)       <----------DOF2<---------GLK1(2)<---------bZIP60(2) <---------At4g35610------>MYB46(1) -WOX13(1)---------->DOF2   <---------AtLEC2 <---------ANAC55(2)      --------->At4g35610------>MYB83   ccaataacgaatcaaagaagcttttggtgtgaatggattctccgatggcgtgatgttgccggcggtttgtttagctccggcgaaatgcacctacaaaaaa  22253100             ------->TEIL            <---------CCA1(2)          <---------ANAC55(2) ------>ANAC58           --------->TOE2(3)           <---------ANAC58 ------>ANAC58     --------->YAB1------->TEIL        <---------ANAC58                      <------ZmHOX2a(1) ------>ANAC46  --------->WOX13(1)    ---------->DOF2<---------ANAC46                --------->At4g35610 --->DOF2 --------->ANAC55(2)<---------TOE2(3)      --------------->AtSPL8  <-------TEIL--------->At4g35610   acgcaagttgttatgtatctatcaaaatgttaatgaaactaaaagattgaatatttcgtacattagaagatgagaagatgcagaagaagcagaggaatag  22253200                                                   >>>>>>>>>TBF1                                          <---------ANAC58                                          <-------GAMYB                                          <---------ANAC58                                         <---------MYB46(3)                                         --------->MYB55(2)                                         <------MYB46(1)                                         <------MYB83                                         --------->MYB52(2)  <---------ANAC58                      <---------AtMYB61  <---------ANAC46                   <-----------RAV1(1)  <---------ANAC58                   <---------MYB46(3)                                  <---------YAB1   agttgcttcaatattgttcatcttcttggtgagagagatttgttggttgagaagaagaaataagatgaagagagagtaatgagatttcactatgatttca  22253300                                                                                            <------MYB83                                                                                            <------MYB46(1)                                              <---------AHL20(2)                           <---------                                             --------->AHL20(2)                      --------------->AGL15                                          --------->YAB1                             <---------------AGL15                                          --------->AHL20(2)                         <---------DAG2                                         --------->ICU4                              <----------DOF2                                         <---------YAB1                             <----------------                                       <--------HAHB4                          <-----------GT1                    --------->ZAT14    <---------ICU4                       <---------AHL20(2)    ---                    <---------ZAT14   --------->ICU4                      <---------YAB1   ----------                    --------->ZAT18   <---------YAB1                    <---------AHL20(2) --------->MYB59 *TSS  --------->GLK1(2)            --------->YAB1                     <---------AHL20(2)  --------->MYB111(1)   tgaagagagagtctatcgagacttcactatgaagtgagtcataattataaaattttagaactacagtttattttttatttttatcaactttattaggtac  22253400                                                                       <---------YAB1                                                                      --------->AHL20(1)                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                      <---------AHL20(1)                                                                     <---------ICU4                                                                     --------->YAB1                                                                    --------->ICU4                                                                    <---------YAB1                                               --------->ATHB12   --------->YAB1                                              <---------YAB1      <---------ICU4                                             <---------TOE2(3)   <---------YAB1                                             <---------TOE1(3)   --------->ICU4                                            <-----------GT1     <---------AHL20(1)                                          <---------AHL20(2)    --------->AHL20(2)                                        <---------YAB1          <---------AHL20(2)                                       --------->AHL20(1)      --------->YAB1                                      <---------AHL20(2)      <---------YAB1    --------->AHL20(2)                                      --------->AHL20(2) <---------ARR11(3)     <---------AHL20(2)                                     --------->AHL20(2)  --------->ARR11(3) --------->AHL20(2) ------AtSPL8              <---------------AtSPL8       <---------CCA1(2)   <---------AHL20(2) -AGL3                     --------------->AtSPL8      <---------AHL20(1)  --------->AHL20(2) --------->CBF   --------->ZAT6      <---------AHL20(1)<---------ARR11(3)  <---------AHL20(1) ----->AtSPL8 <---------CCA1(2)      <---------AHL20(2)--------->ARR11(3)  <---------AHL20(2)    <---   tacaatatttgaacttgtatcactaaattttagtactaaattattttaacgattgaatatatctattataattataatttaattaaaaacatttcaaaat  22253500                                                        <---------ZAT18                                                        --------->ZAT18            <---------ZAT18                           ------->PIF5         <------MYB46(1)                          --------->ZAT2         <---------ANAC58                         <---------ZAT2         <---------ANAC58                        --------->ANAC58                        <---------AHL20(1)         <------MYB83          --------->O2      --------->ANAC58              <---------TOE1(2)        <---------MYB46(3)     --------->ANAC46  --------->ANAC46           <---------ANAC58   ------->TEIL         <-----------GT1    <-----------GT1                  <---------ANAC58 ------AHL20(2)    <---------ANAC46 ----------->GT1   <-------PIF5          <---------ANAC46<--------   ttatgaacatttggtgcaattgtgtataactccacgagaggtttttaacccaagcaggggcactatagaatacaagtttcgtagtttatagtatattttt  22253600                                                     --------->TOE2(3)                              <                        <---------GLK1(2)           ----------->GT1                               ---                        <---------ARR11(3)          <---------ANAC55(2)                          <---                 <---------AHL20(2)          --------->CCA1(2)                                  -----                 --------->AHL20(2)       <---------TOE2(3)                                 <-------- -AHL20(2)      <---------ATHB12          <---------YAB1                                 --------->YAB1   gagaaacaaaaaactccaattaaacagattttaggtgttcaaataagatagaaaacgtaaactaaaaactagtttgaaaatactaaaattttcatattct  22253700                                                                                <---------AHL20(2)                                                                         ----------->GT1                                                                   <---------At4g35610                                                                   --------->At4g35610         --------->AHL20(2)                                    --------->ARR14(2)               <---- ---------WOX13(1)                                             <---------ARR14(2)              ------ ------>ATHB12                                            --------->MYB52(1)   <---------AHL20(2) ------YAB1              <----------ID1                 <---------MYB52(2)     --------->AHL20(2) ---------->AGL15      ---------->DOF2                --------->AtMYB61 <---------TOE1(3)      <----- -GLK1(2)<---------AHL20(2)                          --------->MYB46(3)<-----------RAV1(2)     <-----   tgattgggaatttaaataagtttcttaaagacaaaatccaaaaactcactcagaaaccactaccgtatcagcttcaggttataaatttgataatcaattt  22253800  Previous    Next  AGI:  At1g60390.1    Description:  BURP domain-containing protein / polygalacturonase, putative. Identical to Probable polygalacturonase non-catalytic subunit At1g60390 precursor [Arabidopsis Thaliana] (GB:O80760;GB:Q0WTJ0); similar to JP630, polygalacturonase [Arabidopsis thaliana] (TAIR:AT1G23760.1); similar to BURP domain-containing protein / polygalacturonase, putative [Arabidopsis thaliana] (TAIR:AT1G70370.1); similar to Polygalacturonase-1 non-catalytic subunit beta precursor (AroGP1) (Polygalacturonase converter) (PG converter) (GB:Q40161); similar to unnamed protein product [Vitis vinifera] (GB:CAO66055.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66 Range:  from: 22251139    to: 22253301    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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