Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ATHB12    <----------DOF2   --------->YAB1   <---------ANAC58  <---------ATHB51   <---------ANAC58  --------->ICU4  <---------MYB46(3) <---------ATHB12 --------MYB46(3) <------NtERF2 -------AtMYB61--------->RAP2.3(1) -------DEAR3(1)<---------ANAC46                          <------NtERF2 ------>ALFIN1 <------NtERF2                             ----------->GT1 ----AtMYB61 <---------RAP2.3(3)                --------->ATHB12 --->ALFIN1<------MYB46(1)         <---------ZAT14       --------->LBD16 --ANAC46  <------MYB83 <---------YAB1         <---------YAB1 --bZIP60(2) <---------DEAR3(1)    --------->ZAT14       <------NtERF2                        >>>>>>> --ANAC58 <---------AtMYB61        <---------ZAT18      <---------ANAC46                    --------- --ANAC58 --------->MYB111(1)      --------->ZAT18     <---------LBD16               <---------ZAT6   gtggtgcttgatttggtggcgcaattatgtttccgagtggactagtcggattattgggccggagaataacatatgttcttcttggtagaggtaaaccacc  22247000                                                                            ------>ZmHOX2a(2)                                                                          <---------AGP1                                                                          <---------ARR14(2)                                                <---------YAB1            --------->ARR14(2)                                          <------NtERF2                   <-----------ARR10                                    <---------ANAC58                      <---------ARR11(3)                                    <---------ANAC46                      --------->ARR11(3)        -                                    <---------ANAC58  <---------TOE2(3)<---------HSFB2a(2)          -         <-----------HVH21     <-----------RAV1(1)   <-----------RAV1(2) <---------CCA1(2)          -    <---------YAB1    <---------ANAC58  <---------DEAR3(1)             --------->HSFB2a(2)       ----    <---------TOE2(3) <---------ANAC46 --------->ALFIN1               <---------LBD16            <--- >>>>>>>>>>LFY        <---------ANAC58<-----------HVH21         <---------ARR11(3)               ---- >MYB46(3)           ---------->ID1 <---------RAP2.6(2)         --------->ARR11(3)      --------->CCA1(2)   attgttaacattgtcaaggctgtgtcgtcttcgatgttgcggtcggggtcttgattcaggttccaagatgtttctggatcttgccctaagaaatgggtct  22247100        -------->P        ------>MYB83        ------>MYB46(1)      <---------MYB46(2)      <---------MYB111(1)      <---------MYB59   ------>MYB83   ------>MYB46(1) <---------MYB55(2) <---------MYB46(2) <---------MYB111(2) <---------MYB52(2) --------->MYB46(3) --------->AtMYB61                                              <------ZmHOX2a(1) <------NtERF2 <---------MYB111(1)                                     ------->TEIL        --------->DAG2 -------->ANAC58                               <---------HSFB2a(2)          ---------->DOF2 -------->ANAC58                               --------->HSFC1(1)          ---------->DOF2 --------->ATHB12 -------->ANAC46                               --------->HSFB2a(2)  --------->ANAC58       ---------- ----->At4g35610                         --------->ARR11(3)    --------->LBD16 <---------LBD16 ------ZAT14  <---------MYB46(3)         <---------ARR11(3)  <-----------RAV1(2) --------->LBD16----- ----->ZAT18 <---------YAB1  --------->YAB1    <---------HSFC1(1)   --------->ANAC58    <---------AtLEC2   gcaccaaacctacctatggttgcaggctcaaacatgagcgagagagcttcgagaagacgagcctcaggagaagcatcaaaaggcggagtagcatggttga  22247200                                                                      ----------->HVH21                                                                   ------>ZmHOX2a(2)                                                                   =======================HOX2a_HOX2a                                                                  <------ZmHOX2a(2)               ---                                            --------->TOE2(3)     ========================HOX2a_HOX2a                                  ------->GAMYB            <-----------RAV1(2)             <---------ICU4             <---------MYB52(1)  <----------ID1          =================HOX2a_HOX2a     --------->GLK1(2)            <-------GAMYB        --------->MYB46(3)      <------ZmHOX2a(1)         <------ZmHOX2a(1)- ->GT1   ------>NtERF2      --------->TOE2(3)            ================HOX2a_HOX2a      --------->ICU4 ----->DOF2<---------MYB46(3)    --------->ANAC46     --------->HSFB2a(2)          ==================   aagtaaaccgaggccgttgtctcgtttcaatctcaacgacaaattgcctcaaacatcgaggacaggcgatctctgatgggttagaggatgcaattctgac  22247300                                                                   <---------ANAC46                                                            --------->MYB52(1)                                                       <---------ZAT18                                                       <-------TEIL<---------ANAC58                                                       --------->ZAT14                                                    <---------ANAC58                                                    <---------ANAC58                                                    <---------ANAC46--------->LBD16                                                   --------->MYB55(2)           --------->YAB1                          <---------MYB46(3)     --------->YAB1                          <<<<<<<<<<<<<<<<<LFY  <---------ANAC58    <------ZmHOX2a(2)                   ---------->DOF2<---------ZAT14       --------->At4g35610 ------>TOE1(2)                ---------->DOF2   <---------MYB52(1)<---------ANAC55(1) -------->SPL7   ----------->RAV1(1)  ------>ZmHOX2a(1)--------->ZAT18  --------->ATHB12--------->YAB1 ==========HOX2a_HOX2a       --------->AtMYB61 --------->ATHB12    --------->ANAC55(2) ----------->HVH21   catacgatcacaatggtagcaccagtagagaccaaaagtcctaaatgctccattgggtgcactatcggtccgtgttattggctgactcaatgacattgtt  22247400                                                              <---------ANAC58                                                              <---------ANAC46                 --------->ANAC46                             <---------ANAC58        --------->GLK1(2)                 --------->ANAC58                             <---------AtLEC2       <---------GLK1(2)                 --------->ANAC58                <---------TOE1(3)                   <---------ARR14(2)               --------->ANAC46                  <---------TOE2(3)                   --------->ARR14(2)             --------->ANAC46                   <---------DOF5.7(2)                ----------->ARR10        <---------YAB1                 <-----------TBP    <-------GAMYB     ---------->DOF2 ---------      ----------->GT1                 --------->TOE2(3)<---------ANAC46<------------CBF  <----------DOF2    <------------CBF            <-----------GT1 --------->MYB52(1)  ------------>CBF<---------At4g35610   ggaaggaattgttatacacaagacatataaacatttacaacatttatagataacgttgagggttgcatgaggcaattgaaaagggcagattcttttcaaa  22247500                                                                                     --------->ZAT6                                                         <-----------GT1      <---------TOE2(3)             <----------DOF2               ------------>CBF                   <---------YAB1 --------  --------->ARR11(3) ---------->DOF2      --------->ANAC58                    <---------TOE1(3) -------->AGL3   <---------TOE2(3)        --------->ANAC58               <----------DOF2     --------   tataggtcttggtttctttgaggcaaagcttgagatggatgaagaagcaatgctcattttttctagttttctatgcttttaagattacctctagctaaag  22247600                                                                               <-------GAMYB                                                                              <---------MYB46(3)               <---------ARR14(2)                                         <-----------RAV1(1)               --------->ARR14(2)                                         <---------YAB1           --------->HSFC1(1)                        <------------CBF   --------->YAB1     --------->YAB1                            <---------TOE2(3)       <---------YAB1     <--------HAHB4                           <---------DOF5.7(2)    --------->YAB1     <---------ICU4   <---------AHL20(2)    <---------MYB52(1)       --------->ATHB51     <------ZmHOX2a(2)     --------->ATHB12 --------->AHL20(2)    --------->DOF5.7(2)      -------->ATHB1      --------->ARR11(3)  --------->YAB1     --------->AHL20(2)    <-------GAMYB             <---------ICU4      <---------ARR11(3) -->DOF2   <---------HSFB2a(2)         <---------WRKY18(1)           <--------HAHB4     <------ZmHOX2a(1) ->MYB52(1)--------->HSFB2a(2)        ----------->HVH21             --------->ICU4 <---------YAB1   gctagaatcatttctcgaatccatttatttttctaaggcctggaccgttaacgaatattgggcatactgaattattatggtggttatgaaggatcatttt  22247700             --------->TOE2(3)                                                            --------->ANAC46            --------->YAB1                                                                --------->ANAC58            <---------------AGL15                                                      <---------ZAT18           <---------YAB1 <----------DOF2                               <---------AHL20(2)--------->ANAC58           <---------TOE2(3) --------->HSFB2a(2)                <---------WOX13(1)<----------DOF2   cagttttagaattaacataaatagttttcttttagaattagtagtttcaaattagaagaattagtaattgatttttaattccatctttatgcactcaatt  22247800                    --------->ALFIN1         <---------At5g28300          <-------TEIL                   ------->MYC3             <-----------GT1      <---------WOX13(1)                   <-------MYC3  <---------ARR11(3)            --------->ATHB12   gagcatttagaaattggaaaacgtgttgatatgaagaccctatattttactgccatagtctccattgattaatacatacatagttgggagactaatgaga  22247900  Previous    Next  AGI:  At1g60360.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G19950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61837.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68008.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 22246413    to: 22247396    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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