Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                -----                                               <---------CCA1(2)                               <-----      --------->REM1(2)                      --------->ANAC46                                 -------     --------->ALFIN1                      --------->ANAC58                                   -------   <---------ANAC58                        --------->ANAC58                                   <------   <---------ANAC46                      --------->CCA1(2)                           --------->YAB1 <   <---------ANAC58                    <---------ZAT2                          --------->ANAC58------ -->GLK1(2)            ------->GAMYB   --------->HSFC1(2)                      --------->ANAC46<----- ---ARR14(2)        ----------->RAV1(1)--------->ZAT2                          --------->ANAC58------ -->ARR14(2)        --------->MYB52(1) <---------HSFC1(2)                 <---------CCA1(2)  <------- --GLK1(2)<------ZmHOX2a(1)           <-----------ARR10                <-------TEIL --------->ICU4  <   tggttgtgtgtaggacaataaacaacagcatttgaattcgaagctacgcataactcacatctcattgcaaacatccatctctcgcaattgttatccccgt  22221100  --------->ARR14(2)  <---------ARR14(2) <---------ZAT2 --------->At4g35610                               <---------At4g35610 <------NtERF2                                  <---------At4g35610 --------->ZAT2                                 --------->At4g35610 <---------At4g35610                            <---------ZAT2 <<<<<<<<AtERF-4                               <-----------RAV1(1) ------>HVH21                              <-------MYC3             <---------YAB1 ------HVH21                               ------->MYC2          <---------YAB1 -->O2                                     ------->MYC3       <---------YAB1 -->ANAC46                              <---------ALFIN1    <---------ICU4 ---O2------>ZmHOX2a(1)               ------>MYB83 --------->At4g35610 ---------ATERF1(1)                   ------>MYB46(1)      <---------YAB1 --->LBD16                          <---------ALFIN1       --------->ICU4 --PIF5                    <----------DOF2 <-------MYC2 --------->ICU4 ->PIF5       <---------ARR11(3)    --------->AtMYB61   <---------YAB1 --LBD16      --------->ARR11(3)   --------->MYB46(3) <---------At4g35610         <---------ALFIN1 <- <<<<<<<<AtERF-3    <---------At4g35610--------->MYB46(3)<---------ICU4<---------YAB1             <--   ggcagctcctctcaaacatctctgctcttctttggtgaccacccacatgctgctgctgatgattattgttattgttatggtgaaccacatgaggcatatg  22221200                                                                    --------->YAB1                                                         --------->MYB52(2)             --------->ICU4                            --------->ICU4             <---------YAB1                            <---------MYB52(1)     --------->YAB1                                  --------------->AGL15     <---------ICU4                                  <---------------AGL15                <---------WOX13(1)    <---------YAB1 <---------YAB1                    ================================================   <---------ARR11(3)                               <-----------------AGL2              --------->ATHB12   --------->ARR11(3)                               ----------------->AGL1             --------->ICU4 --------AtLEC2 <---------YAB1                      <-----------------AGL1             <---------YAB1 -----TEIL<---------ANAC46                          ----------------->AGL2  <---------ANAC46   ------   tgcatgatcatggtgttgattattcatgttagcgaagacgacttgagtttgatggccattagtggcacaattgtaatggtgcgaataacatgattgacaa  22221300                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(1)                                                                      <---------ANAC55(2)                                                                     <-------TEIL                                                                     ------->TEIL            ------>ZmHOX2a(1)                                      <---------SPL7    ------>MYB83                                                   --------->TOE1(2)    ------>MYB46(1)                                                --------->TOE2(2)    -------->P  --------->MYB52(1)                                <---------ANAC58  --------->AtMYB61                                               <---------ANAC58 --------->HSFC1(2)                                              --------------->AtSPL3       ------- --------->HSFB2a(1)                                             <---------------AtSPL3      <------- <---------HSFB2a(1)               <---------ARR14(2)           <---------DOF5.7(2)        --------->YAB1 <---------HSFC1(2)                --------->ARR14(2)        <------MYB83                 <---------YAB1 --------->MYB46(3)   ---------->DOF2                        <------MYB46(1)        ------->TEIL ===========================MADS_MADS<-------TEIL           --------->MYB59    <---------AtLEC2    <- ---->DOF2  <---------------AGL15----------->GT1       ---------->DOF2<---------ANAC46    --------->ICU4   agaaccatcccgtcctcataacagaaaagtatagacggatacatcgagcagttatcgcaaagttggtaacgtacgtgttctgcatgtatgttattatgat  22221400                                                                           --------->ALFIN1                                                               --------->ANAC55(2)                                                               <---------ANAC55(1)                                                               <---------ANAC58                                                               <---------ANAC58   --------->HSFB2a(1)                                         <---------ANAC55(2)  <---------TOE2(3)                       --------->ZAT6   <-------GAMYB  <-------MYC3  <---------TOE1(3)                  <---------HSFB2a(2)   <-----------HVH21  <---------AtMYB61                  --------->HSFB2a(2)  <---------MYB46(3) ----------->HVH21 -->YAB1                          --------->GLK1(2)  <---------LBD16      ------->MYC3              - --YAB1<-----------HVH21       --------->ARR11(3)  <------ZmHOX2a(2)--------->ETT(2)                - --------ANAC46                <---------ARR11(3) <-----------HVH21 <---------ETT(2)              <--   ggcgaaggttgtcacatgtaaggcagaagttaagagcttctgtaacacaatggatcacggctgttacatgtctacatgtgtgacaaacttgagccatgtt  22221500                                                                            --------->AHL20(2)                                                                           --------->AHL20(2)          <-------TEIL                                                 --------->AHL20(2)      --------->ARR11(3)                                              <---------AHL20(2)      --------->AHL20(1)                                             --------->AHL20(2)      <---------ARR11(3)         <-----------GT1                   ------->TEIL      <---------AHL20(1)<-----------GT1                     --------->CCA1(2) -------->LBD16        <---------YAB1           --------->ANAC58--------->ANAC58                  --- ----->ZmHOX2a(1)   <---------YAB1              --------->ANAC58--------->ANAC58                  --- -------ANAC46   <---------TOE2(3)            --------->MYB52(1)--------->ANAC46                  ---   tcctgaaaaatattcatataagattataacaaaattatcaacttcgcaaaacggaagagaagaaacacgaatttaaaataaaaaaaaacattcaacttac  22221600   --------->TOE1(2)                                                                             <---  --------->MYB46(3)                                                                      <---------AHL20(2) ------->TEIL                                                                           <---------RVE1(1) ------>ANAC46                                                                         --------->ARR11(3) ------>ANAC58   --------->ANAC58             --------->GLK1(2)                        <---------GLK1(2) ------>ANAC58   --------->ANAC58          ------------>CBF                            <---------ARR11(3)   acgaaccaaggagagaaggaagccaaagttttgttttctctgtgaaacaatctgtgaagctcgtatttagatggagtttctaatttgtagattttttttt  22221700                                                                                                   --                                                                                              <------                           <-----------GT1                                               --------->ATHB12                     --------->ARR11(3)                    <---------ATHB51              <---------AHL20(2)                     <---------ARR11(3)        <----------DOF2                          --------->AHL20(2)                  <------ZmHOX2a(1)            --------->TOE2(3)                        <---------AHL20(2) --------->MYB52(1)  <---------AHL20(1)      <---------YAB1<---------AHL20(2)       --------->AHL20(2) --------GT1     ----------->GT1       <-----------GT1  --------->AHL20(2)  <---------ICU4<----------   aacaaactgattatgtagaaggatatattttactaagttatatacttatctttaactataaattattctcaaaattcaacattacatttattaattgaga  22221800                         <---------YAB1                                                         <----                        --------->ARR11(3)                                                     ------                  --------->AHL20(2)                                                           <-----                  --------->YAB1                                                               <-----                  <---------AHL20(2)                                                           <-----              <---------YAB1                                                                   ------             --------->ARR11(3)                                                               <------    ----------->GT1    --------->YAB1                                                         <------  ---------->DOF2<---------YAB1                                      ---------->DOF2  <----------DOF2 ------->YAB1<---------ARR11(3)                                   --------->YAB1     --------------->AGL15 ---TOE2(3)----------->GT1               ------>ZmHOX2a(2)      <---------TOE2(3)  ---------->ID1   - --CBF   ---------->DOF2<---------ARR11(3)             <---------AHL20(2)         <-----------GT1----   ataagaaagaaaaaagataattatatgatatttgaaaaattgatccttgtttctcatttttttgttaagaataaagtttttttttttccttttatcggat  22221900     <------ZmHOX2a(2)    --------->ARR11(3)    <---------ARR11(3) --ZmHOX2a(2) --->ARR11(3) ----ARR14(2) ----AGP1                                                                     <----------DOF2 ----ARR11(3)          <---------MYB52(1)    <---------ARR11(3)               <---------DAG2  ------>MYB46(1) --->ARR14(2)        <---------ANAC58        --------->ARR11(3)       --------->ARR11(3)      ------>MYB83 ---CCA1(2)          <---------ANAC58       <---------GLK1(1)         <---------ARR11(3)      ------- ---ARR14(1) --------->YAB1  <---------AHL20(2) <----------DOF2      --------->CCA1(1)       -------- --------->DOF2 --------->YAB1        <---------REM1(1)              --------->RVE1(1)     ---------- -->ZmHOX2a(2)  <---------ICU4       <---------TOE2(3)           --------->AHL20(2)--------->YAB1<---   cttaaagatcagtaagaataatgtcgtttcttaaattttgatgtagaaatcttttttttttgaagaaaaaaatatcccaactttatcaacataaccaaac  22222000  Previous    Next  AGI:  At1g60250.1    Description:  zinc finger (B-box type) family protein. similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT1G68190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24166.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 22220742    to: 22221497    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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