Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------ICU4                                                                                 --------->ATHB51                                                                                 <--------HAHB4                                                                                 -------->ATHB1                                                                                 <---------AHL20(2)                                                                              <--------ATHB1                                                                              -------->HAHB4                                                                              --------->YAB1                                                                              <--------HAHB4                                                                              <---------ICU4                                                                              --------->ATHB51                                                                             <---------ATHB51                                                                             --------->ICU4                                                                             <---------YAB1                      <-----------GT1                                      --------->YAB1                    <-----------GT1          <---------ARR11(3)         ----------->GT1               <---------MYB52(1)            --------->ARR11(3)    <---------YAB1-------->HAHB4             <---------ANAC58               --------->YAB1   --------->AHL20(1)  --------->YAB1             <---------ANAC46              <---------TOE1(3) --------->AHL20(2) <---------YAB1             <---------ANAC58              <---------TOE2(3) <---------AHL20(1) --------->ICU4     --       <---------MYB52(1)                  <---------YAB1    <---------AHL20(2) <---------ATHB51   <-      --------->TOE2(3)         <---------AHL20(2)    ----------->GT1 <----------DOF2              -- >RAV1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      ------->TEIL<---------AHL20(2)    <---------TOE2(3)   aaacttatcgttattccgtttttttcacatctattttaaaattttaagataatgtatgtttaatattttatgctttgtaataattattaagttttatgaa  22158800             <----------DOF2          <-----------GT1       <---------AHL20(2)              --------->TOE2(3)    --------->AHL20(1)                 <----------DOF2    <---------AHL20(1)         --------->AHL20(1)    --------->ARR11(3)         <---------ARR11(3)              <---------YAB1    <---------ARR11(3)         --------->ARR11(3)           <---------AHL20(2)  <---------AHL20(1)           <---------AHL20(1)          --------->YAB1  --------->AHL20(1)        ------>MYB83                  <---------YAB1  <---------AHL20(2)        ------>MYB46(1)          ----------->GT1 ------->AHL20(1)         <---------MYB59      --------->TOE1(3) --------AHL20(2)      <------ZmHOX2a(1)       --------->TOE2(3)--------->YAB1               <------ZmHOX2a(1) ------->AHL20(2)     <----------ID1<-----------GT1---------->DOF2                         <---------TOE2(3)   ataaaatatttttttctttataagaggaccaaatatttttactttaatacctcaaaagttattatatcatagtccatactattaacaaaaatttaggaat  22158900                                    --------->AHL20(1)                                    --------->ARR11(3)                                    <---------AHL20(1)                         <------NtERF2                                    <---------ARR11(3)                      --------->At4g35610                                  <---------ARR11(3)                        <---------At4g35610                                  --------->ARR11(3)                    --------->ALFIN1               ----------->GT1    --------->AHL20(1)                 --------->TCP20      <---------AHL20(2)          <---------AHL20(1)                 <---------PCF2                 <      --------->AHL20(1)         --------->YAB1   ---------->DOF2 <-----------RAV1(1)            <---      --------->AHL20(2)--------->DAG2       ---------->ID1       --------->ALFIN1 <---------ARR14(2)     --------->AHL20(2)---------->DOF2 <---------AHL20(2)       <-----------RAV1(1)--------->ARR14(2)   acccaaaaaaaattgaaatgtaacaaaaagtccaaaaatatttttttggcccaaaagccctcatatatgtggggctggggctgcatagccgcatggtttt  22159000                                    <---------TGA1a                              <-----------HVH21                             <------MYB46(1)                             <---------MYB46(3)                             <------MYB83                           ===================MYC_MYB                           <--------P                          <-------GAMYB                                         ---------->DOF2                          ====================MYC_MYB                    ----------->GT1             <----------DOF2--------->MYB59     <------ZmHOX2a(2)     --------->YAB1             =================================bZIP_DOF               <---------YAB1            <---------ANAC58<---------AtMYB61  <---------ARR14(2) --------------->AGL15 --------->PCF5     --------->MYB52(2)      <------NtERF2         <---------------AGL15     <-------- -----------HVH21 <---------MYB52(1)----------->RAV1(2)          <---------ANAC58       <---------YAB1 ------LBD16<---------ANAC58<---------MYB46(3) --------->ARR14(2)<---------ANAC58       --------->ICU4   ccggtcccctagtttctttcgttatttgggttggtcagacctgggctccgatccagcgtaatctgtttcttatcatagtaaataaagaccataattcatt  22159100                                                                           <---------ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                           --------->ANAC58                                                                          --------->ZAT18                                                                          <-------TEIL                                                                          --------->SPL7                                                                        <---------ARR14(2)                                                   --------->ANAC58     --------->ARR14(2)                                                   --------->ANAC58     <---------SPL7                                         <---------YAB1               <---------MYB46(3)                                        --------->TOE2(3)      <---------ARR11(3)                                       <--------HAHB4          --------->ARR11(3)                                       --------->ATHB12       <---------CCA1(2)         ------------>CBF              <---------ICU4--------->TGA2(2)<---------------AtSPL3    --------------->ANT      <------------CBF      --------->bZIP60(2)<---------------AtSPL8  ------->GAMYB     <---------ANAC58  --------->ICU4<-----------TGA1 <---------ANAC46 <---------ALFIN1   <---------ANAC58  <---------YAB1<-----------HVH21<---------ANAC58           ----- -AHL20(2)    <---------ARR11(3)    --------->YAB1 --------->ANAC46  <---------ANAC58    <---------ZAT18   tcaacacacttcccaatatgtttcttatctaaattgcatcatcattaatgtctacgtcacaactatatctagcgggtacgcaaatggctactggacttac  22159200                                                                                               ------                                                                                              -------                                                                                              -------                                                                                       <----------DOF2                                                                                      <---------ANAC58                                                                                 <----------DOF2                                                                                <---------ANAC58  ---                           <---------ANAC58                     <---------MYB52(1)    <---------ANAC58                           <---------ANAC58         --------->ARR11(3)          <---------ANAC58 ----                           --------->ALFIN1         <---------GLK1(2)       <---------ANAC58  <------                         --------->ALFIN1           --------->ARR14(2)      <---------ANAC58 <------- ---->ANAC55(2)    ---------->DOF2                  <---------ARR14(2)    <-----------GT1   <--------   ttattctaacatggaacgaagaaaagagtgtgtgtgtgtgtgagaaatggaacagattttggctctgtttgccatttttcttgcttttgctttctccggg  22159300                                                       <------NtERF2                                                      --------->LBD16                                                      ------>NtERF2                     --------->CCA1(2)                <---------RAP2.6(3)                     <------ZmHOX2a(2)               --------->RAP2.3(3)                    --------->ARR11(3)               --------->RAP2.6(2)                    <-----------ARR10                --------->RAP2.3(2)     ----------->HVH21------>ZmHOX2a(2)              --------->ATERF1(2)     --------->DEAR3(1)                              --------->DEAR3(1)    <---------At4g35610       ----------->RAV1(2)    <---------ATERF1(2) --->LBD16          <---------AGP1                  --------->ATERF1(1) -->HSFB2a(2)       --------->AGP1                  --------->RAP2.3(1) -->LBD16           <---------ARR11(3)              --------->DEAR3(2) ------>GLK1(1)     <---------ARR14(2)             <---------ATERF1(1) ----->ARR14(2)     --------->ARR14(2)       <----------DOF2                                        < ---HSFB2a(2)      <---------CCA1(2)    <-------TEIL<------NtERF2   <-----------------AGL1      <---- --LBD16        --------->At4g35610   <---------ARR14(2)       <---------At4g35610   <---------AHL20(2) -LBD16         <---------At4g35610   --------->ARR14(2)<---------ALFIN1             --------->AHL20(2)   aaatgcagcgacgttttcagcagatctgactaccctgagggattcgtctttggagccggcacttctgcttatcaggtttggaaccaatttatgagcttct  22159400                                                                 --------->At4g35610                                                           --------->At4g35610                                                           --------->ZAT2                                                           <---------At4g35610                                         --------------->AGL15   <---------At4g35610                                   <------MYB83         --------->At4g35610                  <-------                                   <------MYB46(1)      <---------At4g35610          <---------ANAC58                                  --------->MYB59       <---------ZAT2--------->ANAC58      <--------                                  <---------AtMYB61     --------->ZAT2--------->ANAC58   --------->ALFIN1        <----------DOF2        --------->ATHB12       <------ZmHOX2a(1)              <---------ANAC58  --------->TOE2(3)         ------>MYB83<-----------------AGL3<---------At4g35610  ------>MYB46(1) -----------GT1             ------>MYB46(1)    <---------ZAT6 --------->At4g35610  ------>MYB83    <- ------DOF2       --------->MYB52(1)    =============================================================   tttttcttaacttttgaacaaaactgaaccaaatgtttggtctctactagtgggaaggagctgctgcagaagacggaaggaaacctagcctgtgggacac  22159500                                         <---------YAB1                                       <--------HAHB4                                       --------->YAB1                                            >>>>                                      <---------YAB1                                             >>>>                                    --------------->AGL15                                        >>>>  <-----------HVH21                 <---------------AGL15                                       ----- --ZAT18                     --------->ZAT6  <---------ZAT6                                     ----- -PCF2                   --------->AHL20(2) <---------YAB1                                    ------- ---------DOF2   <----------DOF2   <-----------------AGL3                                     <------ ====================================================MADS_MADS       <----------DOF2        <--------   tctttgtcactctcgtaagcttttcattttaacacaaactattattagtattagagtttgtcactcttgtgctttgattcttgtttctaacattgcaggt  22159600         ------->GAMYB        <---------ANAC46      --------->MYB52(1)      <---------DOF5.7(2)     <---------GLK1(1)  <---------TOE2(3)       <---------ANAC46 >>>>>>WRKY38          ----------->HVH21 >>>>>>WRKY43         ------->MYC3 >>>>>>WRKY26         <-------MYC3 ---->WRKY38(1)    <---------ANAC58 ------>HVH21      <---------ANAC58                   <---------GLK1(2)                         ----- -->At4g35610 --------->CCA1(2)                      <---------At4g35610          ----------->GT1 ---At4g35610<---------ARR11(3)                  <----------DOF2             <---------ICU4     ----- ---RAV1(2)  --------->ARR11(3)  --------->YAB1<-------TEIL               --------->REM1(1)--------->YAB1   gaccaaggtaacggagatatagcatgtgatgggtatcacaagtacaaggttctttagcttctctgtttctctgactacatcatgaggttttattcatcaa  22159700  Previous    Next  AGI:  At1g60090.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G45191.2); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G22100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40009.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 22159247    to: 22161730    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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