Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ------->TEIL -------->ANAC46                                                                       ------->TEIL -------->ANAC55(1)                                                               --------->YAB1 ---------ANAC55(2)                                     <---------GLK1(1) --------->AtLEC2 -------->ANAC55(2)                                   --------->ATHB12 <-------TEIL    --------->GLK1(2)   acacataacatgtatttatgtctacccatactacaatattgtacatgttgttctattgatttctccttgtaaatacatgcacaaacatgaatctgaaaat  22142400                        <-----------GT1                <---------AHL20(2)                --------->AHL20(2)            --------->AHL20(2)                                <---------ZAT14           <---------AHL20(2)                                 <---------ZAT18           <---------YAB1                           <---------ZAT14          <---------AHL20(1)                        --------->ZAT14        --------->AHL20(1)                      <------ZmHOX2a(1)          ----------->GT1       --------->YAB1  <-----------GT1 --------->ANAC58       --------->ZAT14       --------->AHL20(2)              --------->ANAC58       --------->ZAT18               ---------   tgttcttaataatattatttaaattttaactcactagagacaaacaacaaggactatactatagtatactattggagaagttacacacttaaaatggttt  22142500                                                         --------->AHL20(2)                                                         <---------AHL20(2)                                                     <---------AHL20(2)                                --------->ICU4       --------->AHL20(2)                           --------->ANAC58      <---------AHL20(2)            --------->DAG2 --------->ANAC46      --------->AHL20(2)       <------ZmHOX2a(1) -->GT1    ---------->DOF2 --------->ANAC58     <---------AHL20(2) --------->ICU4                  <-   ataaacaaactaaaaaagtgtcatcaaataagcaatatttgaaatgctattttaaatatttatttagtaagtatcaggacgtctacttagagtttttcat  22142600                                                                        ----------->GT1                                                                        <------MYB46(1)                                                                        <------MYB83                                                                        <---------ANAC55(2)                                                                       --------->MYB59                                                                     <---------MYB52(1)                                                                    --------->TOE1(3)                                                                  <---------TOE2(3)                                                                 --------->MYB52(1)                           --------->AtLEC2                  --------->DAG2                          --------->TOE1(2)            --------->ANAC58--------->MYB111(1)            ----------->HVH21             ----------->GT1   ---------->DOF2    ----------->GT1  -----          <---------ANAC55(2)         --------->DAG2   ----------->GT1<---------MYB55(1)        -----          --------->ANAC55(2)  ---------->DOF2         --------->ANAC46--------->MYB46(2)      ------    --------->AHL20(2)    --------->TOE2(2)      --------->AHL20(2) --------->TOE2(3)         ------- ----------HVH21   <---------AHL20(2)---------->DOF2   --------->ANAC58--------->MYB52(2)   <------ZmHOX2a(1)   gcgtcataaattatgtgacatttacttacatgcgaaagaaaaaggagtaaataaaacacgaaaaaagtaacgttaggtaaatggctaaacacgaggaaaa  22142700                                                                                                   ==                                                                             ---------->DOF2       --                                                                           --------->YAB1        <---                        <---------CCA1(2)                                 <---------YAB1         <---           <---------ATHB51                           --------->YAB1    --------->YAB1           ----       --------->AHL20(2)                            --------->AHL20(2) <---------ICU4           ----       <---------AHL20(2)                        --------->AHL20(2)    <---------AHL20(2)        <---   --------->AHL20(2) <---------ANAC58         ----------->GT1      --------->AHL20(2)        ------- ---->ANAC58          <---------ANAC58       ---------->DOF2       --------->AHL20(2)       --------- ---->ANAC58        <---------ARR11(3)  <---------AHL20(2)         <---------AHL20(2)       <-------- --->DAG2  <---------AHL20(2)          --------->AHL20(2)     <---------TOE2(3)      <----------DOF2 --->DOF2  --------->AHL20(2)        <---------ARR11(3) --------->ICU4 <---------ATHB51 <---------LBD16   gccaaaaatataaataattcaatttcttatctccatcaagatttaataaaagtaaataaaaattaagaaataaataatgaaaagatgctttggggagtgg  22142800     --------->ARR11(3)     <---------ARR11(3)  ----------->TBP ==============================HOX2a_HOX2a ---->ZmHOX2a(2) ------AGP1 ------ARR14(2) ----->ARR11(3) ----->ARR14(2) ------ARR11(3)  ---------->DOF2                                     <----------DOF2 -->ALFIN1      <---------AHL20(2)                    --------------->AGL15                    ------ >ALFIN1      ----------->TBP                    *TSS <---------CCA1(2)                   >>>>>>>>>>GT-3b -ANAC46 ----------->GT1<------ZmHOX2a(1)   <-----------GT1---------->DOF2           ---------->DOF2   atctataaatcttgttatataaaggaggatagatagtgagggttttctaccttcttctatctaaaggaagtctttactcagagaaccaaaagaaaaataa  22142900                           ----------->GT1                      >>>>>>>>>>>>>>>>>LFY                     --------->ANAC58  ---------->DOF2    --------->ANAC58                                               <---------------- ---->DOF2         ---------->DOF2       <---------AHL20(2)            ----------->HVH21 ------->GAMYB   agagaaaagaacccaaaaaaaaaaagccattgtaaattcagaataaatggaagaacatctaaatccattagcagtgactcatcttcttcaacacacacta  22143000                                                           <---------HSFB2a(2)                                                          --------------------->WRI1                                                         <---------ANAC46                                                     ------>ZmHOX2a(2)                                                     ============================HOX2a_HOX2a                                                     =========================HOX2a_HOX2a                                                    <------ZmHOX2a(2)                                                    ==========================HOX2a_HOX2a                                                    =============================HOX2a_HOX2a                                                   --------->ARR14(2)                                                   <---------ARR11(3)                                                   <---------AGP1                                                   --------->GLK1(2)                                                   <---------ARR14(3)                                                   <-----------ARR10                                                   --------->ARR14(3)                                                   --------->ARR11(3)               <---------At4g35610                                                   <---------ARR14(2)          --------->ANAC58                                                  <------ZmHOX2a(1)       ------>ZmHOX2a(1)                                             <---------HSFB2a(2)       ------>ZmHOX2a(1)         ------->TEIL                        --------->HSFB2a(2)   --------->ARR14(2)  <---------CCA1(2) -----WRI1                                  <---------LBD16--------->HSFB2a(2) --------->ANAC58     <   agaagcttatgcatccatgagaactctcaatgggtttatgctgttttctggaggatcttgcctagaaactatcctcctcccaagtaagcttatcttcaaa  22143100                                                                                 <---------ICU4                                                                                 -------->ATHB1                                                                  <---------YAB1 --------->YAB1                                                              <---------ANAC58  <---------ATHB51                                                              <---------ANAC58  <---------ATHB12       ------>ZmHOX2a(1)                                   <----------DOF2      --------->ICU4   ------->GAMYB                                 --------->AHL20(1)     <---------YAB1  --------->MYB46(3)                             <---------AHL20(1)    <---------AHL20(2)      ------ -------->P                                      <---------ARR11(3)  --------->ICU4            ------ ------->TEIL                                    --------->ARR11(3)  <---------YAB1           <------ -----------GT1     --------->GLK1(1)<-----------GT1    <-----------GT1<---------AHL20(1)  --------->ICU4   atcaacctcctacatatataagaaatctaaaactcgatttttcatttcgaaaatatttctactttcttgttattatttttcaattattctgcaagtatta  22143200                      <---------ANAC55(2)                       <---------------AtSPL8                      ----------->GT1                     --------->At5g28300                      --------->ANAC55(2)                ----------->GT1         <-----------RAV1(1)                     --------->MYB59           <---------ARR11(3)         <---------ICU4        ----- --->ATHB51   ----------->GT1                  --------->ARR11(3)     --------->ICU4<---------MYB46(3) -->ATHB1   <---------LBD16          <---------TOE2(3)   --------->YAB1  <---------YAB1     --------- ---YAB1   <---------ANAC46--------->ICU4     <---------CCA1(2) <---------------AtSPL3      ---------   ttgtgagtttgttttggggaaaataggtaatttttcattaagaaacacaaatctttcaatggtaaatatgtactgatcatttcatgttgttggcaagcag  22143300  Previous    Next  AGI:  At1g60060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53900.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40921.1); contains domain PTHR13902:SF3 (PTHR13902:SF3); contains domain PTHR13902 (PTHR13902) Range:  from: 22142849    to: 22145455    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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