Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------WRKY18(1)        ----------->GT1                <-----------GT1                     ----------->HVH21       <---------HSFB2a(2)           <--------HAHB4               <---------ANAC46         --------->ATHB12                   --------->YAB1           <---------ANAC58            <---------YAB1                      <---------ICU4           <---------ANAC58            <---------ATHB12                   <---------ATHB12     <---------AHL20(2)             --------->AHL20(2)             <---------bZIP60(2)     --------->AHL20(2) -------->ZAP1--------->WOX13(1)            <---------ANAC46 <---------AHL20(2)  --------->WRKY38(1)<---------ICU4        --------->ANAC55(2) -------->AHL20(2)   --------->WRKY12<-----------GT1       <-------TEIL   <---------YAB1 -ANAC55(2)<---------ANAC46         <---------AHL20(2)---------->DOF2     --------->ICU4      ------- -->GT1  --------->ARR11(3)  ---------->DOF2 --------->HSFB2a(2)----------->HVH21  <----------DOF2---   aattttataaatttcttgggggtttgaccgagaaagaattaatcattcgagatgtcaaaagttcatgtgatgtgtaatcatttttctttgttttccacat  22110600                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                --------->ICU4                                               <---------TOE1(3)                                               <---------TOE2(3)                      <---------YAB1      <------MYB83                                              <                    <---------ICU4        <------MYB46(1)                                          --           <<<<<<<<<GATA-1                ----------->GT1                                          -- -->ANAC46<-----------GT1                --------->MYB59    <---------DAG2                        --- ------->DOF2    <---------AtLEC2     --------->ATHB12      <----------DOF2                       <--   caaaggtgtttttatctatgcatgatgactccgatgagattgtttggttaatgtttaatttgctttatgcctaagcatgttaacaaatgtgattttagtc  22110700            <---------ANAC46     <---------ALFIN1                                                                               <   ------->TEIL                          <----------DOF2                                           <-  <-----------GT1                     <---------ARR11(3)       --------->YAB1                  ------ ---------REM1(1)              --------->WOX13(1)        ------->TEIL                         ------- ------------->AtSPL3       <---------ARR11(1)        <---------YAB1                        --------- ------------->AtSPL8    --------------->AGL15   <----------DOF2  --------------->AGL15    --------->ICU4 ------>At4g35610       ==========================================================MADS_MADS<---------YAB1 -------At4g35610       ----------------->AG  ---------->ID1--------->WOX13(1)  <---------YAB1<------   agatgtaccacttctcgtggaaactttccaaatctatcaatttcttttgttcttttatgaatctatcacattttgtagtaatgtgatagtttgatgatga  22110800       <---------ANAC58       <---------ANAC58      --------->STY1(2)                                                                        <----- ---------At5g28300                            --------->DAG2                                  ------ ----------GT1                                ---------->DOF2                                  ------ --->ATHB12          <---------GLK1(1)   <----------ID1                                       ------- -->ICU4           --------->ATHB12   --------->DAG2                                          <------ >YAB1<---------STY1(2)              ---------->DOF2          ---------->DOF2        --------->AHL20(2) ---YAB1          <---------YAB1  --------->At4g35610<---------YAB1              ----------->GT1   tttacccttgctagtagagcatgatttctgtttatcagataaagggacaaaagtgatgatagagaaaagagtgaagcatcaacaagtttaaatcgaatga  22110900 =====================================HOX2a_HOX2a                      <---------MYB52(1) <------ZmHOX2a(1)                                                   --------->ATHB12 ----ICU4                                                           <---------YAB1 --->YAB1                      <------ZmHOX2a(2)                  --------->YAB1     --------->YAB1-- --->ATHB12            ------------>CBF                          <---------YAB1    <---------ARR11(3) -->ICU4 -------->P---------->TaMYB80                        <----------DOF2<----------ID1      ----- ---ATHB12         <---------KAN4(2)                      <-----------GT1<---------MYB46(3) <--------   ttaggatggacaaccagttggaatatgcaatggatcagttagaatagacgattagctatttatctttatcatcgttgggggacaaaatcatatatcggga  22111000                                                 --------->HSFB2a(2)                                           <--------P             ----------->TGA1                                       <---------ANAC46           ----------->HVH21           --------->ALFIN1            <---------ANAC58         --------->O2           *TSS                        <---------ANAC58         --------->ANAC46          --------->ALFIN1           --------->MYB52(1)      <---------ZAT18     --------->ALFIN1               <---------SPL7      <---------ANAC58  --------->ALFIN1                  ------>ZmHOX2a(1)   <---------ANAC55(2)                      ---- ------->ALFIN1                  ---------->ID1  <---------HSFB2a(2) <---------YAB1     <------ZmHOX2a(1) ---->ALFIN1    <-----------------AGL3 <---------ANAC55(1)   --------->ETT(2)      ------->GAMYB <--- -LBD16 --------->ALFIN1XXXXXXXXXXXXXXXXXXXX>MIR426     <---------ANAC58        --------->MYB52(1)<--   gggggagggggaggggggacaatttttggaaatttgtccttacgggtagtactagaatacttgtccacatgacgatttgaaataaccgaaggacatatga  22111100           --------->AHL20(2)       --------->AHL20(2)       <---------AHL20(2)      <---------AHL20(2)                                                                   <---------AHL20(1)      --------->AHL20(1)                                                                   --------->AHL20(1)      --------->AHL20(2)                            <-----------GT1                        <---------AHL20(2)      <---------AHL20(1)                  --------->YAB1                                  --------->AHL20(2) ------->GT1                              --------->ATHB12                     ----------->GT1 -------ID1<---------AHL20(2)        <---------ATHB12                     --------->ATHB12--------->YAB1 ----ZmHOX2a(1)            <-------TEIL <---------WOX13(1)  <------ZmHOX2a(1) ----------->GT1   ggaaaaaataaaattaaactcgagacaaattcatatcaaatgaatgatagaatttaactcgaggataagtttatattgaatgggtaatacaattatattg  22111200                                                                                    <-------TEIL                                                                                <-------TEIL                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                           <---------------------WRI1                                                                        --------->CCA1(2)          --                                             <-------TEIL             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   aagaaaatttcatatcgaatgactaatacaattagaccgagaaaaaattcatatcgaatgactaatagaattagataggggatacgttcaaatcgaataa  22111300                                                                                      --------->REM1(2)                                                                                     --------->ALFIN1                                                                                   ==================                                                                                   <---------O2                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   <---------TGA1a                                                                                   --------->O2                                                                                   <---------bZIP60(2)                                                                                   <---------ANAC46                                                                                   <---------ANAC55(1)                                                                              <---------ICU4                                                                              --------->YAB1                                                                             --------->ICU4       <--                                                                             <---------YAB1      <---                                         --------->AHL20(2)                --------->YAB1<---------At4g35610                                         <---------AHL20(1)              <---------ARR11(3)   <------                                         --------->AHL20(1)          <---------MYB59 <---------REM1(1)                                   ----------->GT1               <---------ZAT18   <---------ANAC55(2) --------->GT1           ---------->DOF2 <---------AHL20(2)      --------->ZAT18----------->TGA1 <---   gtagtcaaattagattgagaacaaattcaaagcgaatgagtaataaattagatcgaatagaagattgtggaccaaaatcataatgacgtgtagccgattt  22111400       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     --------->WRKY12     --------->WRKY38(1)     --------->WRKY45  <---------ANAC46               <---------AHL20(1) ====bZIP_DOF                    --------->AHL20(2) xxxxx>smallRNA(se3)             <---------ARR11(3) -------TOE2(3)                  --------->AHL20(1)                ----------->GT1 --------GT1                     <---------AHL20(2)              --------->CCA1(2) ----DOF2  ---------->DOF2       --------->ARR11(3)<---------AHL20(2)              ----------->GT1 ------DOF5.7(2)                --------->AHL20(2) --------->AHL20(2)       <---------ANAC55(2)   aacgtcgtggaccaaaagacatacaattgatcaaatatatttcaaaaccagatttaaattttgtaagagatgaaaatcacataagaagaaaaaaaacttc  22111500  Previous    Next  AGI:  At1g60025.1    Description:  MIR426; miRNA Range:  from: 22111011    to: 22111121    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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