Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->TOE2(3)                                        <------ZmHOX2a(1)      <---------ANAC55(2)                                                --------->YAB1      <---------ANAC58                                                 <---------TOE2(2)      <---------ANAC46                                                 <---------TOE1(2)      <---------ANAC55(1)                                             ------>ZmHOX2a(1)      --------->ANAC55(2)                                            --------->TOE2(2)      <---------ANAC58                                             <------ZmHOX2a(2)  <---------DAG2<---------MYB59                                   --------->ARR14(2)  <----------DOF2                                    <---------ICU4=============HOX2a_HOX2a --------->ANAC46                                  --------->AHL20(1)--------->TOE1(2)          ----- --YAB1       ------->TEIL    <-----------GT1     --------->YAB1  <---------ARR14(2)    ---------->DOF2   tacactttacgtattgaacctaaatatcaatttcacagttggaagtttacaaaaataatgccagtgtcgatcctaggatgatgcgaaaccaaaagatgat  22084100                  ------->TEIL               --------->AtLEC2              <-------MYC3              ------->MYC3                     <------ZmHOX2a(1)              <-------MYC2                   <---------TOE2(3)      ---------->DOF2         <--------     --------->AHL20(2)                    --------->CCA1(2)  --------->AHL20(2)           --------->ANAC58 <---------ANAC55(2)                    <---------YAB1        <---------AHL20(2) ----------->HVH21 ------>GT1   ------->MYC2            --------->YAB1---------->DOF2--------->AtMYB61       --------->ANAC58   gttacatatatatacacatgcacatttagtattctggttatcaagataaggatgaaaagactaattaaaccaaagcagtgtctatgacattgcaagcatt  22084200                                                                                                  <--                                                                                                 <---                                                                                                 ----                                              --------->GLK1(2)                 --------->ZAT2 ======                                             <---------GLK1(2)                  <---------ZAT2 <-----  ------>MYB46(1)                         --------->YAB1                        --------->At4g35610  -------->P                             --------->At4g35610                    <---------At4g35610  --------->ANAC46                     --------->YAB1                <-----------HVH21     ----------  ------>MYB83                      <---------CCA1(2)           --------->MYB46(3) --------->At4g35610 -ATHB12                          --------->YAB1           ------->TEIL--------->YAB1---------->DOF2   ctccaacccataagacaaaattgattctacaaactttcatatcatcagaatctatgaaatgaatcaacaactatcacatctcagcagcaaagttaaagga  22084300                                                         ----------->HVH21                                                        ------->MYC3                                                        <-------PIF4                                                        <-------MYC3                                                        ------->PIF4                                                        <-------MYC2                                                        <-------MYC4                                                        ------->MYC2                                                        ------->MYC4                                                        ------->PIF5                                                        <-------PIF5                                                       --------->ANAC46                                                --------->ALFIN1                                                <-----------RAV1(1)                                               ------->MYC3                                               <-------MYC3                                              --------->TGA1a                                            =====================bZIP_bZIP                                            ==================================================bZIP_DOF                                            --------->TGA1a                                     ------>ZmHOX2a(2) --------->ANAC58                                    <------ZmHOX2a(2)  --------->ANAC58                                   <---------ARR14(3)  <---------ANAC55(2)                                   --------->ARR14(3)  --------->TGA1a                                   <---------ARR11(3)  <---------TGA1a                                   --------->ARR14(2)  --------->ANAC55(2)          ------>ZmHOX2a(2)        <---------ARR14(2)  --------->O2        --------->ARR11(3)         --------->ARR11(3)  <---------O2    <---------YAB1 --------DOF2                      <-----------ARR10   --------->bZIP60(2) ------HSFB2a(1)             --------->TOE2(3)<---------TGA1a     <---------AHL20(2)      <---------MYB52(1) ----->HSFB2a(1) <---------AHL20(2)--------->AGP1      =======================================bZIP_DOF ================HOX2a_HOX2a --------->TOE1(3)================================================bZIP_DOF -ZmHOX2a(1)     --------->YAB1  ----------->ARR10 ----------------->PIF3(1)--------->ATHB12 >DOF2  <---------ARR11(3)  ----------->GT1 <---------TGA1a      --------->AHL20(2)<----------DOF2   ctttccacatgatctatatttataagggtatcgttaagatcttctcacatgtgtggcacgtgacatatttaatattcttgatgggcttttctgtttttta  22084400                                                                                   <---------CCA1(2)              <---------LBD16                                                    --------->O2   <----------DOF2                                    *TSS                       <---------O2  <---------DAG2                               --------->AHL20(2)          --------->HSFC1(2)  <----------DOF2     --------->AHL20(2)      --------->AHL20(2)     --------->MYB52(1)   tgggccttttcgaatttcagggttttaaataagttagaaattagataaataaaaaacaaattagcaaaaaataacgaagtgtctcgtctcttctctcttg  22084500                     <---------ANAC46                                    <---------REM1(1)     ------                <-----------RAV1(1)                                    <---------ANAC46        <-----        <---------ZAT14                                               <---------AtMYB61        ------        --------->ZAT14                                       --------->LBD16                <-------        <------ZmHOX2a(2)           <---------At4g35610       ------>ZmHOX2a(1)        ------>ZmHOX2a(1)       <---------ARR11(3)       <---------ATHB12            ----------->RAV1(2)       --------->TOE2(3)       --------->ARR14(2)  >>>>>>>>>>>>>>>>>LFY            ------>ZmHOX2a(1)     --------->MYB46(3)   tcttctccagatcagtgtttgtggggttttcccaatggagcttcttctctcattgtctctcctcctggggttttggtgtaacaacaatcctcaattcacg  22084600          <---------ICU4                               <---------At5g28300         <---------YAB1                               <-----------GT1       -------->ATHB1                             --------->ARR14(2)       <--------HAHB4                             <---------ARR11(3)      <---------ATHB12                            <---------GLK1(2)     ------->TEIL                             --------->LBD16 --->O2<---------ICU4       --------->KAN4(2) <---------LBD16 ----O2--------->YAB1    <---------ANAC58 <---------ARR14(2)                                    ----- --->ANAC46   <-----------GT1             --------->ARR14(2)                 <-----------GT1    ----- ----GT1 --------->ICU4  <---------ANAC58<---------GLK1(2)        <----------DOF2               -----   aggcatgaatcattattctccccatttgcttattctctggctagaatccccagattttactgtatcgactttgggaatttaactggagaaccatttccac  22084700                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                   <---------LBD16                                                                  ------>NtERF2    <---------GLK1(1)                                                                 --------->ANAC46  <---------At4g35610                                                    ------>ZmHOX2a(2) <------NtERF2--------->ZAT2                                                   <------ZmHOX2a(2) --------->LBD16    ------>NtERF2 ---->ANAC46                                      <---------ARR14(2)--------->DEAR3(1) ----------->HVH21 ---->ANAC58                          <---------ATHB12      ---------->DOF2        --------->At4g35610 ---->ANAC58              <<<<<<<<<<<<<<<<<LFY    --------->ARR14(2)<---------ANAC46   --------->DEAR3(1)   tcaaactgggaaacaaaaacctgttattgaacaatggccactcattcatcgagatcggagaataaagacgccggagaagaagatgagctccgacgaagga  22084800                       --------->ANAC46                  --------->MYB52(1)                       --------->ANAC58                <----------DOF2                       --------->ANAC58               <---------ANAC58                     --------->LBD16                  <---------ANAC58               ---------->DOF2            ------>ZmHOX2a(1)                   ---------->DOF2           <---------TOE2(2)           <---------ANAC58                  <------ZmHOX2a(2)            <---------TOE1(2)           <---------ANAC58                 <---------ARR11(3)           <-----------RAV1(2)     <---   acccttatgaagtccttggcatccccagcaattcgactgatcaagagatcaaaagtgcttatcggagaatggctctcaggtttttcaaaaagattgaaac  22084900                                                                   ------->TEIL                   <--                                                                   --------->ARR14(2)        <-------                                                                   <---------ARR14(2)        --------  <-------GAMYB                                                   <---------CCA1(2)    <---------ANAC58 <---------ANAC46    <---------TOE2(3)                        <---------ZAT14          <---------ANAC58 <---------ANAC58    --------->MYB59                         --------->ALFIN1<---------TOE2(3)    <-- <---------ANAC58    <---------TOE1(3)                   <---------ANAC58    <---------TOE1(3)<------ -------DOF2  <-------TEIL       --------->ATHB12        <---------ANAC58   ---------->DOF2  --------   tttgcgttgattaagatgcaatttaggtttagaattgatttaagaggtttagaatttgtgcgagtgttgtatctgtgttaaagttgattacttggtggtt  22085000  Previous    Next  AGI:  At1g59980.1    Description:  ARL2/ATDJC39 (ARG1-LIKE2); heat shock protein binding / unfolded protein binding. Identical to Chaperone protein dnaJ 39 (ATJ39) [Arabidopsis Thaliana] (GB:Q6XL73;GB:Q8GWE4;GB:Q9ZUJ4); similar to ARL1 (ARG1-LIKE 1), heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G24120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40961.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74067.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, Range:  from: 22084454    to: 22087316    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version