Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                  ---                                                                                                  >>>                                                                                                  <--                                                                                                  >>>                                                                                                  >>>                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  >>>                                                                                                  ---                                                                                                  >>>                                                                                                  >>>                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                          --------->ZAT2                                                                                          -----------                                                                                          --------->At4g35610                                                                                          <---------ZAT2                                                          --------->YAB1                <-----------RAV1(2)                <---------ANAC58                         --------->MYB46(3)            --------->ZAT14                <---------ANAC58                        -------->P <-----------GT1     <---------ZAT14             <---------GLK1(2)                        <---------MYB52(2)             --------->ANAC46     ----------->HVH21                                --------->MYB46(3)           <---------ALFIN1<-   <----------DOF2                                    <---------MYB55(2)          --------->ZAT14---- ----->GAMYB --------->ARR11(3)                       <---------MYB111(1)         <---------REM1(2)-- ----------AtMYB77       <---------YAB1       <---------O2--------->TOE2(3)       <---------ZAT14---- ---->MYB52(1)--------->GLK1(2)            <-------TEIL------->GAMYB            --------->ZAT14<----- -------GT1  <---------ARR11(3)    ---------->DOF2    <---------MYB111(2)  --------->ZAT14<---------At4g35610   actgtctttgacaaagattcttgcatcattttaggctcaaagagattcacatggcaacaaccatagtttttatcttctacagtctacactgcagctggag  22054600    --------->ARR14(2) ------NtERF2 ------>RAP2.3(3) >>>>>>AtERF-3 -------ATERF1(2) >>>>>>AtERF-2 >>>>>>AtERF-1 ------>RAP2.3(2) ------>DEAR3(1) ------>ATERF1(2) ------>RRTF1(2) ------>RAP2.6(2) ------>ANAC58 >>>>>>AtERF-4 ------>ANAC58 >>>>>>AtERF-7 >>>>>>AtERF-5 ----->RRTF1(1) ----->RAP2.3(1) ---NtERF2 ----->ORA47(2) ----->DEAR3(2) -----At4g35610                                     --------------->AGL15 -----ATERF1(1)                                     <---------------AGL15                   <-------- ---->At4g35610                                    <-----------------AGL3               --------->ATHB51 -----RAP2.3(1)           --------->ARR11(3)       ----------------->AGL2               <---------ICU4 --->ARR14(2)             <---------ARR14(2)       ----------------->AGL3               --------->ATHB12 >RAV1(2)                 <---------ARR11(3)       <-----------------AGL2               <--------ATHB1 --------RAP2.6(3)       --------->CCA1(1)       <---------YAB1                         -------->ATHB1 ----->ATERF1(1)         --------->RVE1(1)  <------ZmHOX2a(1)                --------->ATHB12    <--- ---->NtERF2     <---------ZAT6           <---------TOE2(3)         <---------AHL20(2) <---------YAB1 ----->ERF1  <---------ZAT14              <---------TOE1(3)   <---------CCA1(1)        --------->ICU4 ----ARR14(2)--------->ZAT14 <----------DOF2--------->YAB1    <---------RVE1(1)        <---------ATHB51   ccgccagttttgctgtatagtgttagaatatcttttttttttttaaggatgatgctaaaattggatatttttaattcattcattgaacaattattgaatt  22054700                                        --------->YAB1                 <-----------------AG                   <----------DOF2   <----------DOF2        <---------AHL20(2)        --------->TOE2(3)   --------->YAB1                  --------->AHL20(2)            --------->TOE2(3)       ----------->GT1     --------->AHL20(2)              <---------AHL20(2)  <------MYB46(1)       <---------ZAT6      <---------AHL20(2)           --------->AHL20(2)     ----------->GT1      <---------TOE2(3)   --------->AHL20(2)            <---------AHL20(2)     <------MYB83  -------- -AHL20(2) <---------AHL20(2)  --------->YAB1          <---------AHL20(2)   <---------MYB52(1)  ----- --------GT1 <---------GLK1(2) <---------ICU4      <---------AHL20(2)  <-----------GT1    <----------DOF2   ttccttctaatgttaaattctctttcaaattaataatctctttaatcacatgttttatttatttattttggtttatccatttggttatttatctttaatc  22054800                                                                                 ------->MYC3                                                                                --------->TGA1a                                                                                <---------TGA1a                                                                                --------->ANAC46                                                                                <---------O2                                                                                --------->ANAC55(2)                                                                                <---------ANAC55(2)                                                                                <---------ANAC46                                                                                --------->O2                                                                        <-------MYC3                                                                        ------->MYC3                                                                       <---------O2                                                                       --------->O2                                                                       <---------ANAC58                                                                       <---------ANAC46                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                       --------->TGA1a                                                                       --------->ANAC58                                                                       <---------ANAC58                                                                       <---------ANAC55(2)                                                                       <---------TGA1a                                                                       <---------bZIP60(2)    -------                                                 <-----------GT1       --------->bZIP60(2)    -------                                            <---------AHL20(1)         <---------bZIP60(1)    -------                                            --------->AHL20(1)         --------->bZIP60(1)   <-------                                            --------->ARR11(3)         --------->ANAC55(2) <---------SPL7                                          <---------ARR11(3)        ----------->HVH21      --------->REM1(2)                                          --------->ARR11(3)       <-----------HVH21       --------->ZAT14                                          <---------AHL20(1)      --------->ALFIN1--------->ALFIN1                     <---------YAB1     ------->TEIL          <-----------RAV1(2)<-------MYC3--------                <---------AHL20(2)   <---------YAB1        <---------YAB1----------->HVH21 <---------ZAT14               --------->AHL20(2) <---------ARR14(2)  ===========================bZIP_DOF<----------- ->YAB1 <---------YAB1            --------->ARR14(2)  ====================================bZIP_DOF ---->YAB1  --------->AHL20(2)    --------->GLK1(2)   <----------DOF2<-------------DYT1 <------------   acatttgagtttgattatataatatgattttaagagaatatgaatatatattgactcttttatcacaggtgtcacgtgactcacgtgaggctgtgtacgg  22054900                                                                               --------->ANAC46                                                                              --------->HSFB2a(2)                                                                              <---------HSFB2a(2)   - -->ANAC58                                                                   --------->ANAC46      <- -->ANAC58                                                                   --------->ANAC58   <---- -->ANAC46                          ------>ZmHOX2a(2)       *TSS             --------->ANAC58  ------ --LBD16                --------------->AGL15    <----------DOF2           ------>ZmHOX2a(1)  <------ ->SPL7           <---------GLK1(2) ====================================HOX2a_HOX2a           ------- ----AtSPL3 ------>ZmHOX2a(1)    <------ZmHOX2a(1)<---------ZAT14------>ZmHOX2a(1)            <------ ------SPL14===============================HOX2a_HOX2a    <------------CBF--------->TOE1(2)   -------   aaaaccttcttatcctctcagagtctcttatattaggatcgctatctactgcttcactgaaattgtcctctcagttcctacgcgaagttttcaacagatt  22055000                                                                                             <-------                                                                                             --------                                                                                      <---------ATERF1(1)                                                                                      ------>NtERF2                                                                                     --------->RRTF1(3)                                                                                     --------->DREB2C(2)                                                                                     --------->RRTF1(2)                                                                                     --------->RAP2.3(3)                                                                                     --------->RAP2.3(2)       <---------HSFC1(2)                                                            --------->DEAR3(1)       --------->HSFC1(2)                                                            <---------ALFIN1       --------->HSFB2a(1)                                                           --------->RAP2.6(2)       <---------HSFB2a(1)                                                          --------->RAP2.6(1)      <---------ARR11(3)                                                            --------->DEAR4(2)      --------->ARR11(3)                                                            --------->ATERF1(1)      --------->ARR14(2)                                                            --------->ERF1      <---------ARR14(2)                                                            --------->RRTF1(1)      --------->GLK1(2)                                                             --------->RAP2.3(1)      <-----------ARR10                                                             --------->ORA47(2)     <---------GLK1(2)                                                             --------->ABI4(1)  <------NtERF2                                                                    --------->LBD16 --------->LBD16                                                                   <---------At4g35610 -------->DEAR3(1)      <------NtERF2                                              ------>NtERF2 --------LBD16         --------->LBD16                                             <---------ATERF1(1) ---TEIL              <---------DEAR3(1)                <------ZmHOX2a(2)          --------->At4g35610 --->ARR14(1)         <---------ANAC46          --------->YAB1                    --------->DEAR3(1) ---ARR14(2)         <---------LBD16     --------->ANAC58               <-----------HVH21<-----------HVH21 -->ARR14(2)        ------->GAMYB        --------->ANAC46       <---------ICU4    --------->ANAC46 ---GLK1(2)        <---------DEAR3(1)    --------->ANAC58  ----------->RAV1(1)   <---------LBD16 -->ARR11(1)     --------->MYB52(1)  <-----------HVH21 --------->ARR14(2)---------->ID1<------NtERF2   cgccggagaatcttcgaatcaacggcggagaaatggctctatcacgcctctcatcacgatccaacatcatcactcgtcccttctccgccgccttcagccg  22055100                                                                                  --------->LBD16                                                                                  <-----------HVH21                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                         <---------MYB52(1)                                                                        <-----------TGA1                                                                        <-----------HVH21         ------->GAMYB                                                 --------->ANAC46        --------->MYB46(3)                            <---------ZAT18<---------At5g28300       --------->At4g35610                          --------->At4g35610--------->DREB2C(2)       <---------At4g35610                          <---------ZAT2  <---------ALFIN1      --------->MYB52(1)--------->YAB1              --------->ZAT2 ------>ZmHOX2a(2)   --------->TOE2(3)   <------ZmHOX2a(2)            <---------At4g35610--------->DEAR3(1)--------->YAB1 --At4g35610--------->ANAC58                  <-----------HVH21    --------->MYB46(3)   <---------ATHB12 ->At4g35610--------->ANAC58                 <----------DOF2 --------->ANAC55(2) <---------ANAC46   attaatctcaacggacacaactccgatcacaatcgagacttcgcttcctttcacagctcacttatgtgatccaccgtcacgctccgtcgaatcatcgagt  22055200                                                                <---------DAG2                                        <---------SPL7    --------->ARR14(2)                                       <---------ANAC46   <---------ARR14(2)                                       <---------O2       <---------GLK1(2)                                       --------->O2   ------>NtERF2                                    ----------->HVH21 <---------ZAT2 ---------->DOF2       --------->HSFB2a(2)   <-------GAMYB            <---------At4g35610       <---------HSFB2a(2)  <---------ANAC46          --------->At4g35610 <---------ARR11(3)         <---------ANAC58         --------->DEAR3(1)     <-----------ARR10     --- --------->ARR11(3)         <---------ANAC58   <---------GLK1(1)<----------DOF2      --------->LBD16   caagagcttctcgatttcttcagaaccatggcgttgatgcgacgtatggaaatcgcagccgattcgctttacaaagcgaagctaatccgagggttttgtc  22055300                                       --------->TOE1(2)                                      --------->ZAT2                                      <---------ZAT2                                      --------->HSFB2a(1)          <-----------GT1                   <---------REM1(1)  <---------HSFC1(2)          <---------YAB1                --------->GLK1(2)     <---------At4g35610       <--------HAHB4              ---------->DOF2         --------->At4g35610      --------->ICU4        ------>NtERF2                 --------->HSFC1(2)       <---------ATHB51      --------->RAP2.6(3)        --------->ANAC58              <---------YAB1    --------->ANAC46             --------->ANAC58    ---------->DOF2     <----------DOF2    ----------->HVH21          <---------AtLEC2  ---------->DOF2<---------ICU4    <---------YAB1 ------>At4g35610--------->At4g35610  <---------HSFB2a(1) --------->ANAC46   --------->YAB1 <--------   atctctacgacggccaagaagctgtagctataggcatggaagctgcgattacaaagaaagacgcgattattactgcttatcgtgatcactgtattttctt  22055400                                                                                        <---------HSFB2a(2)                                                                                 <---------ZAT18                                                                           <---------ARR14(2)                                                                           <---------AGP1  --------->YAB1        <---------SPL7                                                     <-----------ARR10       <---------MYB46(3)                                                  --------->ARR11(3)       --------->MYB55(2)                                    ---------->DOF2 ------>ZmHOX2a(2)      <---------AtMYB61                                <---------MYB46(3)  <---------ARR11(3)   --------->ALFIN1                                   <--------P           --------->ARR14(2) <---------ANAC58                                    <-------GAMYB   --------->DAG2     <------------ <---------ANAC46                                --------->ZAT2      <---------AtMYB61  --------->HSFB2a(2) <---------ANAC58                                <---------ZAT2    ---------->DOF2 ------->TEIL     < -AHL20(2)    <----------DOF2      <----------DOF2  <---------MYB46(3)  --------->ALFIN1-------------   aggtcgtggtggttcgcttcatgaggttttctcagagcttatgggaagacaagctggttgttctaaagggaaaggtggatctatgcacttctataagaag  22055500  Previous    Next  AGI:  At1g59890.1    Description:  paired amphipathic helix repeat-containing protein. similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70060.1); similar to ATSIN3/SIN3 (Arabidopsis thaliana sin3 homolog) [Arabidopsis thaliana] (TAIR:AT1G24190.1); similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G10450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40976.1); similar to putative histone deacetylase complex, SIN3 component [Physcomitrella patens subsp. patens] (GB:EDQ60631.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14871.1); contains InterPro domain Hist Range:  from: 22047495    to: 22054726    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g59900.1    Description:  AT-E1 ALPHA (pyruvate dehydrogenase complex E1 alpha subunit); pyruvate dehydrogenase (acetyl-transferring). Identical to Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial precursor [Arabidopsis Thaliana] (GB:P52901;GB:Q9C5E3;GB:Q9SXC2); similar to IAR4 (IAA-conjugate-resistant 4), pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] (TAIR:AT1G24180.1); similar to pyruvate dehydrogenase complex E1 alpha subunit dehydrogenase [Brassica rapa] (GB:ABV89625.1); similar to Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (PDHE1-A) (GB:P52902); similar to pyruvate dehydrogenase [Citrus x pa Range:  from: 22054960    to: 22057550    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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