Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                        <----------ID1                                                                                      ----------->GT1                                              ------->GAMYB               --------->AHL20(1)     ----                                             --------->MYB46(3)           <---------AHL20(1)     <---                                           --------->MYB52(1)             <---------AHL20(2)     ----                                           ------>MYB83                   --------->AHL20(2)     <---               <---------bZIP60(1)         ------>MYB46(1)   <----------DOF2        ---------->DOF2               --------->bZIP60(1)      --------->ANAC46 <----------DOF2 <---------ATHB12   ---------   attgaaatgtgaatgtgacttcatcaacacaatgacttcaaaacccaacgacggtcttcctttcttttctcaccaataaaatgtagaaaagaaacaaagt  22037800    ---------->DOF2  --------->ANAC58            --------------->AGL15  --------->ANAC46            ===================================MADS_MADS  --------->ANAC58       <---------ARR11(3) ----TEIL               --------->GLK1(1)                       <---------MYB52(1) ----->ZAT18            <---------GLK1(1)                       <---------YAB1 ------ZAT14        <---------TOE2(3)                          --------->TOE2(3) ----->ZAT14        <---------TOE1(3)                      <---------WRKY12 ------ZAT18       <-----------GT1                         <---------WRKY38(1) --------->YAB1 ->DOF2   <----------DOF2--------->ARR11(3)      <---------------AGL15  <----------DOF2      <-------   acacaagaaagacttttcatttaacgatatctccactagtagtagctataactaaatggggtcatcgttattgactttgaataagaaatgttcaaacact  22037900              <---------YAB1             --------->ARR11(3)             <---------AHL20(1)             <-----------ARR10             <---------ARR11(3)            --------->RVE1(1)       <---------ANAC55(2)                      <------NtERF2       --------->ANAC55(2)             ---------->DOF2     <-----------GT1                 --------->DOF5.7(2)                           --------->AHL20(2)  <---------ICU4                    --------->TOE2(3) --------->ATHB12            --------->AHL20(2)  --------->ATHB51                  --------->TOE1(3) <--------HAHB4        ----------->GT1  <--------HAHB4                 --------->MYB52(1)   <---------ICU4     <----------DOF2  --------->YAB1               --------->MYB46(3)     --------->ATHB51<---------AHL20(1)  -------->ATHB1        --------->AHL20(1)     <-----------HVH21      <---------ARR11(3) <---------ATHB51       <---------AHL20(2)     <---------ATERF1(1)    --------->ARR11(3) --------->ICU4         --------->AHL20(2)    --------->DEAR3(1)      --------->AHL20(1)         ---- <---------ATHB12       <---------AHL20(1)    --------->RAP2.3(2)    --------->RVE1(1)        ------- --ALFIN1   --------->CCA1(1)  <---------MYB52(2)    --------->ICU4  --------->CCA1(1)     --------->MYB52(1)   tcaattattacataatatctttgcaataaaataacaaacgttaaagagccgtcgcattattagcacaaaaaatatcttttgtaaataaaaaaacaacgta  22038000      ----------->HVH21      <------NtERF2                                         <---------YAB1     <---------RAP2.6(3)                                   <---------AHL20(1)     <-----------HVH21                                     <---------AHL20(2)    >>>>>>>>>AtERF-3                                     <---------YAB1    --------->RAP2.3(3)                               <---------AHL20(2)    >>>>>>>>>AtERF-4                                  <---------YAB1    --------->RAP2.6(2)                               --------->AHL20(2)    --------->DEAR3(1)                             <---------DAG2    --------->RAP2.3(2)                            <----------DOF2           ---------->DOF2   --------->RAP2.3(1)                         --------->ANAC46     <---------ICU4         <---------WRKY38(1) ------>DOF2                                   --------->ANAC58    <---------YAB1         <<<<<<<<<WRKY6 -->TOE2(3)       --------->YAB1               --------->ANAC58 <---------YAB1     <---------YAB1----   aaagagccgtcacatttgaataataaaacccatcttgcacataaaaaacacgactttttattatttttgattatttcaacaaagtatgaatagtcaacat  22038100         <------NtERF2         ------>NtERF2                 <-----------GT1                              ------>ZmHOX2a(1)  ---------->DOF2          <---------ALFIN1                              --------->YAB1------>ZmHOX2a(1) ------>DOF2              ------>ZmHOX2a(1)            <---------ALFIN1*TSS   --------->At4g35610   aaagaaaagtccgccttgatgttccttcctcactccctatttatccattttctaatcccaccctcttctcttcattcatcatcttcctcctctctctctt  22038200                        --------->LBD16                     --------->MYB52(1)                    ------>ZmHOX2a(1)                --------->ARR14(2)                <---------ARR14(2)          ------>MYB83<---------LBD16          ------>MYB46(1)        <---------MYB55(2)       <------ZmHOX2a(2)        --------->MYB46(3)      --------->AGP1       --------->ANAC58--------->ANAC55(2)       --------->ANAC46--------->ANAC46       --------->ANAC58<---------ANAC55(2)     <-----------GT1====================HOX2a_HOX2a   ------>ZmHOX2a(2)     ---------->DOF2     -----   ctctgtatcacccaactaaatcctcacgggattagatccaaagtctcaaactttgatccaaaaacacaaactttgttcaaaagacataaactttgagcca  22038300                                                     <------ZmHOX2a(1)                                                <----------DOF2                                             ------>ZmHOX2a(1)                                       --------->HSFB2a(1)                  <---------DOF5.7(2) <---------ARR14(2)                 <---------WRKY38(1)  <---------ARR11(3)       <---------ZAT6            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------MYB52(1)           <---------ANAC58           --------->ARR11(3)    --------->ALFIN1        <----------DOF2               --------->ARR14(2)    <---------AtMYB61     --------->ANAC58                 <-----------ARR10  --------->ALFIN1                         ---     --------->ANAC58                 <---------ARR11(1) <---------AtMYB61                   <------- ----->DOF2<---------ANAC58          <---------CCA1(2)  <------ZmHOX2a(1)        --------->YAB1   <--   aagtcacaagctttcttggtgaacgatggattacaatccaaatcttcctcctttaggaggaggtggtgttagtatgagaagaagcataagtcgaagtgta  22038400                                 <---------At4g35610                        --------->ARR11(3)                        <---------ARR11(3)                       <---------GLK1(1)                       ------->GAMYB                       --------->RVE1(1)                      --------->MYB46(3)                       <---------RVE1(1)                   <---------WRKY38(1)                       --------->GLK1(1)                   <---------WRKY12                         -                       --------->CCA1(1)                   <---------WRKY45               ------>NtERF2                       <---------CCA1(1)                  --------->WRKY18(1)          <---------At4g35610 ------>At4g35610     --------->ARR11(3)                --------->WOX13(1)  <---------ARR11(3)      - --ZAT6    <------ZmHOX2a(1)     ----------->RAV1(2)  <---------ATHB12      --------->ARR11(3)  xxxxx -------At4g35610     <---------ARR11(3) <---------HSFB2a(2)<---------DOF5.7(2)        --------->At4g35610   agcagagcaagtaggaacattgaagatatcttctcatctggttcaagaagaacacaatcagtcaacgacgatgaagaagctcttaaatgggctgccattg  22038500        ------>MYB46(1)        ------>MYB83      <---------MYB111(2)      <---------MYB111(1)                                                                          --    -------->P                                                                                   <--- --------->At4g35610                                                     <---------ZAT2    <-------TEIL <---------HSFC1(2)                         --------->ZAT14              <---------At4g35610  <------ --------->HSFC1(2)         <---------ALFIN1<---------ZAT14              --------->ZAT2   <--------P -------->ANAC58           --------->MYB46(3)                            --------->At4g35610 <------- -------->ANAC58   --------->ATERF1(1) ------->TEIL               --------->At5g28300    <-------GAMYB xxxxxxxxxxxxxxx>smallRNA(i2)     --------->YAB1                <---------TOE2(3)       <---------MYB46(3)   agaagctaccaacttacagtcgtctccgaaccactctcatgaacgctgtagtcgaagacgatgtttacggtaaccagctcatgagcaaggaggttgatgt  22038600                                                                           ==========================                                                                           ------>ZmHOX2a(2)                                                                          ===========================                                                                          <------ZmHOX2a(2)                                                                         --------->ARR14(2)                                                                         <---------ARR11(3)                                                                         <---------ARR14(2)                                                                         <-----------ARR10                    <-----------HVH21                                    <---------ARR14(3)                   ------>ZmHOX2a(2)                                     --------->GLK1(2)   <---------ZAT2 <------ZmHOX2a(2)                                      --------->ARR11(3)   --------->ZAT2--------->ARR14(3)                                      --------->ARR14(3)  ------>MYB46(1)<---------ARR14(3)                                 ---------->DOF2  ------>MYB83   --------->ARR11(3)                           --------->ARR11(3) ------->MYB46(3)<---------ARR11(3)                 --------->ZAT2<---------YAB1                   -- --------GT1     --------->ARR14(2)                 --------->At4g35610 ============================= ---REM1(1)      <---------ARR14(2)                 <---------At4g35610 <------ZmHOX2a(1)        ---- --TOE2(3)     ----------->ARR10              ---------->DOF2 <---------ARR11(3)                <----   aaccaagcttgatggtgaagatcgtcagaagtttattgacatggttttcaaagtagctgagcaagataatgaaaggatcttgactaagctaagaaacagg  22038700  Previous    Next  AGI:  At1g59870.1    Description:  PDR8/PEN3 (PLEIOTROPIC DRUG RESISTANCE8); ATPase, coupled to transmembrane movement of substances / cadmium ion transmembrane transporter. Identical to Pleiotropic drug resistance protein 8 (PDR8) [Arabidopsis Thaliana] (GB:Q9XIE2;GB:Q8VXW5); similar to ATPDR12/PDR12 (PLEIOTROPIC DRUG RESISTANCE 12), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G15520.1); similar to ATPDR1/PDR1 (PLEIOTROPIC DRUG RESISTANCE 1), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G16340.1); similar to ATPDR7/PDR7 (PLEIOTROPIC DRUG RESISTANCE 7), ATPase, coupled to transmembrane movem Range:  from: 22038171    to: 22043703    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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