Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <-----------GT1             --------->ARR11(3)                                           <---------MYB52(1)      --------->YAB1           <--------                                         ----------->GT1    <---------ARR11(3)         --------->YAB1                                         <---------ZAT6    <---------CCA1(2) <---------ARR11(3)                           <------ZmHOX2a(1)    <-----------GT1    <-----------GT1    <---------ATHB12   aactattctttctatttttctcaatattaggatgacatatatactgttatttaacatctatatatctaataacaaactaaatcttcgaatcatacttttc  22034700                                              <-------TEIL                                          --------------->AtSPL8                                   --------->AHL20(2)                                  <---------AHL20(2)                                  --------->AHL20(1)                                  <---------AHL20(1)                               --------->AHL20(2)                              <---------AHL20(2)                                                 ----                             <---------AHL20(2)                                          <---------AtLEC2                     --------->ARR11(3)   <---------------AtSPL8                    <------ZmHOX2a(1)   ---------->DOF2   <---------ARR11(3)  <---------YAB1  ---------->DOF2           --------->ZAT18 --DOF2        --------->YAB1--------->AHL20(2)      --------->ANAC46              <---------ZAT14   tcaacaaaagattgcattgataagttcttaatttaaaatatttatgagtacatccaagacaaagaatagttctctattttcagagaggactgcatgtaat  22034800                                                                                         --------->AHL20(2)                                                                            ----------->GT1                                                                           <---------TOE2(3)                                --------->ANAC46                       <----------DOF2  <---------ARR11(3)                                <---------ALFIN1                      --------->TOE2(3) <---------AHL20(1)      <---------ICU4           --------->LBD16                        --------->TOE1(3) --------->AHL20(1)      --------->YAB1          --------->ANAC58                       <---------------AGL15        <--     --------->ICU4           --------->ANAC58                      <-----------------AGL1        ---     <---------ATHB12        <---------LBD16                        <-----------------AG--------->ARR11(3) ----->YAB1          <------ZmHOX2a(1)--------->TOE2(3)            <-----------GT1     --------->YAB1   ggtagtaatcatgttttctcttaggaaaaaacccgcacaacgtttatgggaaacatgtttgtgtttgaataacctttatggaaaaacaaaaatatttagc  22034900                             --------->AHL20(2)                                                     <                  --------->ANAC58                                                                  -                  --------->ANAC58                    <---------ICU4                            <----                  --------->ANAC55(1)                 --------->ATHB51           --------->ANAC58<---               <---------REM1(2)                     --------->ICU4  --------->ANAC46       <--------            <----------DOF2  <---------AHL20(2)  <-----------------AGL1          --------->ANAC58---- -------At4g35610 --------->ANAC46           ---------->DOF2         --------->ANAC58  <---------HSFB2a(2) ------>At4g35610<---------LBD16          <----------DOF2            --------->ANAC58  --------->HSFB2a(2)   aactgattaaaactctttacacggctcatatttaaatattgggcctttagagcccattatggcccataaacacacaacttggaacgcttctagacttttc  22035000              <---------HSFC1(1)              <---------HSFB2a(2)                                              --------->AHL20(2) <---------GLK1(1)                           <---------AHL20(2)               *TSS ---------ARR14(2)           --------->GLK1(1)                           --------->YAB1 -------->ARR14(2)           <---------GLK1(1)          --------->At4g35610 --------->YAB1 -----LBD16   --------->HSFC1(1)            <---------ATHB12          <----------DOF2 ------HSFB2a(2)      <---------LBD16       --------->AHL20(2)      --------->At4g35610 --DOF2       --------->HSFB2a(2) <<<<<<<<<TBF1         <---------At4g35610<---------YAB1 ----->HSFB2a(2)    --------->ARR11(3)      ----------->TBP         --------->ZAT2   tggatttgcctcatttctagaagctctggagatttcttcttcatcaataaatagaatcagcaaactcaccagctttcatcataaattcgaaattcaattc  22035100                                                                    ------->GAMYB                                                                   <-----------RAV1(2)                                                                   ============================RAV                                                                 ----------->RAV1(1)                                                                --------->MYB46(3)            <------ZmHOX2a(2)                                                              =================RAV      <---------ARR14(2)                                        <---------At4g35610   ----------->RAV1(1)       --------->ARR14(2)                            ------->GAMYB          --------->HSFC1(2)                 <---------ARR11(3)                         --------->MYB52(1)        <---------HSFC1(2)              ----------->RAV1(1)               --------->GLK1(1)    <-----------RAV1(1)    --------->HSFB2a(2) --------->MYB46(3)   gtcggaaaattgttcagatttcgaaatcaaccgagaaaatgtcgctgattccaagcttcttcggcaacaacaggcgaatcaacaacaacatattcgatcc  22035200                                                                          ------->MYC2                                                                          <-------MYC2              -                                                                          <-------MYC3              <                                                                          ------->MYC3             <-                                                                          ------->PIF4            ---                                                                          <-------PIF5            <--                                                                          <-------PIF4           ----                                                                          ------->MYC4           <---                                                                          <-------MYC4         <-----                                                                         --------->TGA1a       <-----                                                                         <---------TGA1a      -------                                                                         <---------O2         <------NtERF2                             --------->ARR14(2)                          --------->O2         <------                          --------->ANAC46                               =======================bZIP_DOF                          --------->ANAC58                           --------->ANAC58        <-------                      --------->AtLEC2                               --------->ANAC58       <--------                   <-------TEIL                          ------>NtERF2  ------->TEIL ---------->DOF2-                   ------>ZmHOX2a(2)                    <---------DEAR3(1)------->PIF5    --------->CCA1(2)                  <------ZmHOX2a(2)                     <---------At1g77200--------->ALFIN1 <--------                 --------->ARR14(2)                   <-----------HVH21 ------------>OsbHLH66<-------                 <---------ARR14(2)       <-----------TGA1<------NtERF2<------------OsbHLH66<--------              <---------------------WRI1 --------->ANAC46<---------RAP2.3(1)    <---------ANAC46<----          <---------SPL7  --------->ANAC58<-----------HVH21        --------->MYB52(1)================   attctcactcgacgtatgggatccattcaaggaacttcaattcccgtcatcgtcttcgtcggcgatagcaaacgcacgtgtggattggaaagagacggcg  22035300      ------->PIF4      ------->MYC2      ------->MYC3      <-------MYC4      ------->MYC4      ------->PIF5      <-------PIF4      <-------MYC2      <-------PIF5      <-------MYC3     <---------TGA1a     ==========================bZIP_DOF     --------->ANAC55(2)     --------->O2     ==========================bZIP_DOF     <---------ANAC55(2)     <---------O2     --------->TGA1a    ------------>OsbHLH66   <------------OsbHLH66   <---------ALFIN1 -------->RAP2.3(1) ------NtERF2 --------ATERF1(1) ------>ALFIN1 -------DEAR3(1) ----->ATERF1(1) ---NtERF2                <---------LBD16 ----ANAC46               --------->LBD16 ----DEAR3(1)            <---------ANAC46 -->ATERF1(1)            <---------LBD16                                             --------->At4g35610 ---LBD16               <---------LBD16                                              <---------At4g35610 --ORA47(2)           <-----------GT1                                                <---------LBD16 -RAP2.3(2)         --------->GLK1(1)                                             <------ZmHOX2a(2) -------->ATERF1(1) <----------DOF2                                     <---------ZAT18           <-- -RAP2.3(3)        --------->ARR14(2)                            <---------YAB1   =================== --RAP2.3(1)       <---------ARR14(2)            <---------TOE2(3)      --------->ZAT18       ------- -DEAR3(1)         <-----------ARR10            ---------->DOF2<------ZmHOX2a(1) <---------ARR11(3)<- -----ATERF1(1)   <------NtERF2     ---------->DOF2            ==========================HOX2a_HOX2a ==============bZIP_DOF<---------At5g28300  ----------->GT1  <---------TOE2(3)   --------->ARR11(3)--   gaggcgcacgtgttcaaggcggatttaccggggatgaagaaagaagaggttaaagtagagattgaggatgatagtgtgcttaagatcagcggagagagac  22035400                         <-------MYC2                         <-------MYC3                         ------->MYC3                         -------->ABF1                         <-------PIF5                         ------->MYC4                         ------->MYC2                         <-------MYC4                         ------->PIF5                        --------->TGA1a                        >>>>>>>>>>AtMYC2                        >>>>>>>>>>ABI5                        <---------bZIP60(2)                        <---------O2                        <---------TGA1a                        --------->O2                        --------->ANAC55(2)                        <---------ANAC55(2)                        >>>>>>>>>>HY5                      --------->HSFB2a(2)                    ===============================HOX2a_HOX2a         --------->MYB59                    <------ZmHOX2a(1)                      <---------HSFB2a(2)                   --------->ANAC58                     --------->GLK1(2)     ---------->DOF2----------------->PIF3(1)          <---------GLK1(2)       --------->LBD16     =============================bZIP_DOF             <---------ARR14(2)    <---------LBD16 -------O2         --------->ANAC58--------->REM1(2)   --------->ARR14(2)   --------->MYB52(1) =================HOX2a_HOX2a   <---------ANAC46    <---------ANAC46   <---------TOE2(3) -->CCA1(2) XXXXXXXXXXXXXXXXXXXX>MIR164C         --------->ALFIN1      <---------TOE1(3) ------MYC3 XXXXXXXXXXXXXXXXXXXX>MIR164A/B  ===========================HOX2a_HOX2a               <--- ----->MYC3<------ZmHOX2a(1)   <------NtERF2<------ZmHOX2a(2)   <------ZmHOX2a(1)   --------->GLK1(2)   acgttgagaaagaggagaagcaggacacgtggcatcgtgtagagagatcgagtgggggattctcgaggaagtttaggttaccggagaatgtgaagatgga  22035500                                                  --------->ALFIN1                                               --------->DAG2                                              ---------->DOF2--------->YAB1                                            <---------------AGL15                                           ----------------->AG    ---------->DOF2                        ----------------->AGL1                          <---------ARR11(3)  XXXXXXXXXXXXXXXXXXXX>MIR829.2            <-----------------AGL3                          --------->ARR11(3) ---ZmHOX2a(2)                     ----------->HVH21      --------->YAB1                  <---------GLK1(1)   tcaagttaaagcttcaatggagaatggtgttttgactgtgactgtgcctaaagtggagactaataagaagaaggctcaagttaagtctattgatatctct  22035600  Previous    Next  AGI:  At1g59860.1    Description:  17.6 kDa class I heat shock protein (HSP17.6A-CI). similar to 17.8 kDa class I heat shock protein (HSP17.8-CI) [Arabidopsis thaliana] (TAIR:AT1G07400.1); similar to 17.5 kDa class I heat shock protein [Carica papaya] (GB:AAR25848.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 22035078    to: 22035797    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version