Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------AHL20(2)                                 --------->AHL20(2)                             <---------AHL20(2)                            <---------AHL20(1)                            <---------ARR11(3)           <---------ARR11(3)                      <---------ARR11(3) --------->ATHB12--------->AHL20(1)                         <                      --------->ARR11(3) <---------AHL20(2)   <-----------GT1                     <--                     <---------CCA1(2)  <---------YAB1   --------->ARR11(3)            <---------AHL20(2)                   --------->CCA1(2)<---------AHL20(1)  --------->CCA1(2)             --------->AHL20(1)                  <---------ARR11(3)--------->AHL20(1) --------->ARR11(3)             <---------ARR11(3)            --------->ARR11(3)   <---------AHL20(2)    <---------ARR11(3)     <---------MYB52(1)  <--           <---------CCA1(2)--------->AHL20(1)<---------TOE2(3)<---------At5g28300    <---------AHL20(1)   ttttctcttctatatatctagatatatctatatatttatatatttattgaggtctgagatatattcacagccttctcaacgttggctatatatttgactt  22004800                                                                                 ----------->HVH21                                                                               --------->TGA1a                                                                               --------->ANAC55(2)                                                                               <---------ANAC55(2)                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                              <-------TEIL                                                                            <---------MYB52(1)                        <---------ZAT18                             <---------ARR11(1)                        --------->LBD16                             --------->ARR11(3)                       <---------ANAC46                             <-----------ARR10            <---------ARR11(3)                                      <---------ARR11(3)         --------->HSFB2a(2)                                        --------->ARR14(2)         <---------HSFB2a(2)                       --------->At5g28300    <---------------AtSPL3 ---------MYB52(1)    <---------LBD16             ----------->GT1   <---------ARR14(2) -------ANAC58   <---------AHL20(2)             <---------At5g28300<---------CCA1(2)            <---- -------ANAC58 <----------DOF2        ---------->DOF2  <---------GLK1(1) <-----------RAV1(2)    <----   ccgtttttcttctaggtcttttattgcgcagttcaatactcaaagctaattacggtgatatcggaatccatatcttcaggtacgtgactcttagatttaa  22004900                          --------->TOE2(3)                                 <---------ANAC55(2)                         --------->At4g35610                                --------->ANAC55(2)                      --------->TGA2(2)                                     --------->ANAC55(1)                     <-----------TGA1                                       --------->ANAC58                    --------->ANAC55(2)                                     --------->ANAC46                    <---------ANAC55(2)                                     --------->ANAC58   <-----                    --------->bZIP60(1)                           ------------>CBF           --------                    --------->ANAC46                             --------->TOE2(3)       <-----------GT1             <---------TOE2(3)  <-----------GT1               --------->ARR14(2)       <-----------HVH21       ------>ZmHOX2a(2) <---------At4g35610                  <---------ARR14(2)      <---------bZIP60(1)   <---------YAB1  <-----------STF1<----------DOF2         <---------ANAC55(2)        --------->bZIP60(1) -----TOE2(3)<---------TOE1(3)  <---------AHL20(2)         --------->ANAC55(2)      <---------ICU4 -----TOE1(3)--------->MYB59 <---------ICU4                <---------ANAC46 ----------->GT1  <-------   gggttttgatcgatttaggtttacgtcatcttaattactttcaaagactggtttcattctcgcgtaatctcaatggacgcgtaacatcatgtcactgctc  22005000                                                                                        -------->HAHB4                                                                                        <--------ATHB1                    <------NtERF2                                                       <--------HAHB4                   <------MYB46(1)                                                      <---------ICU4                   <------MYB83                                                         --------->ATHB51                  <---------DEAR3(1)                                                    --------->YAB1                 <--------P                                                            <---------ATHB51                <-------GAMYB                                                          <---------YAB1               <---------MYB46(3)            <---------AHL20(2)                        --------->AHL20(2)               --------->MYB55(2)            --------->AHL20(2)                        --------->ICU4            <---------ANAC58         --------->WOX13(1)                              --------->YAB1            <---------ANAC46       <------ZmHOX2a(2)                                <---------ATHB12 -----DOF2  --------->MYB52(2)     ------------>CBF                                 <---------ATHB51 ->ZAT14    <---------ANAC58      --------->ARR11(3)        ------------>CBF    ------------>CBF --ZAT14   <-------TEIL           <---------ARR11(3)       <-----------GT1---------->DOF2  <---------   taatttgttttggttcgtggttggcgataactataagatcaattagtttaatttggaatataaacaatttggatgcaaaagtctcaataataattacctc  22005100                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)            ------>NtERF2                                                         --------->ARR14(3)           <---------ETT(1)                                       --------->LBD16   --------->ARR14(2)           ----------->HVH21                                      <---------HSFC1(1) <---------AGP1  <---------HSFC1(1)                                      <---------HSFB2a(2)<---------ARR14(3)          --------->DEAR3(2)                          --------->TOE2(3)              <---------ARR14(2)      --------->HSFB2a(1)                          --------->YAB1                 <---------ARR11(3)      <---------HSFB2a(1)  --------->ANAC58      <---------ARR11(3)          --------->MYB52(1)   --------->HSFB2a(2)  --------->ANAC58  <-----------GT1   --------->HSFB2a(2)--------->ARR11(3)     <---------KAN4(2) --GT1           <---------REM1(1)    --------->HSFC1(1) --------->AGP1  <---------HSFB2a(2)        -   tctcaagccctaaattttgttgtaactatcttaaattcttccagaaatttgactcaacagatcttgaaatggattcgagaagaatgtcccgacccagaca  22005200                                                           <---------HSFC1(1)                                                       <---------ARR14(2)              <---------YAB1                                                       <---------GLK1(2)            <---------AHL20(2)                 <------MYB46(1)             <---------ZAT2--------->HSFC1(1)       --------->AHL20(2)                 <------MYB83                <---------At4g35610 <------ZmHOX2a(1)  <---------AHL20(1)              <------ZmHOX2a(1)              --------->ZAT2--------->HSFB2a(2) ------>MYB46(1)          <------ZmHOX2a(1)            <-----------GT1<------ZmHOX2a(1)        ------>MYB83        <---------TOE2(3)         ----------->GT1   <---------TOE1(3) ====================RAV --------->AHL20(2)            ---------->DOF2      <---------TOE2(3) ----------->RAV1(2)<---------AHL20(2) <---------AHL20(2)         --------->YAB1  ------>MYB83--------->GLK1(2)   --------->MYB46(3) -------->AHL20(2)    ----------->RAV1(1)   ------>MYB46(1)<---------HSFB2a(2)----------->RAV1(1)   gattaaatttgaggaaggatggtccaacattcagaaaggtattaccaagctgataaggattctagaaggagagcctgaaccaacattttattttagtgaa  22005300                                                                ------>MYB46(1)                                                                ------>MYB83                                                                -------->P                                                               --------->MYB55(1)                      <---------YAB1                          <---------MYB46(2)                 --------->ANAC58                             <---------MYB111(2)                 --------->ANAC58                             <---------MYB59               >>>>>>>>>NAP                                   <---------MYB111(1)             --------->ANAC55(1)                            ------->TEIL             --------->ANAC55(2)                           <-----------GT1                         --             --------->ANAC46                    --------->MYB52(1)                          <------ZmHOX2a(1)             <---------ANAC55(2)              --------->At4g35610     --------->At5g28300    ========             --------->ANAC58                 <---------At4g35610 ----------->RAV1(1)        ========             --------->ANAC58              <---------MYB52(1) --------->MYB46(3)           <---------TOE2(2)          <---------REM1(2)         <---------ANAC55(2) --------------->AtSPL8             <---------TOE1(2)    <-----------GT1   --------->ICU4--------->ANAC55(2) <---------------AtSPL8   --------->ANAC55(2)   tgttttaaactttacacgtaagtaatgtttgtggtcttatgtaacgtttgctaacagttttgtacctaccacagtaatttcttatgtgattcacaggatt  22005400                                   --------->At4g35610                                 --------->ANAC46                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                     --------->CCA1(2)                     --------->ARR14(1)                    <---------ARR11(3)                    --------->ARR11(3)                    --------->AGP1 <---------At4g35610                    --------->ARR14(2)                    <---------ARR14(2)         ---------->DOF2                   --------->GLK1(1)        <---------YAB1                              <--------P                   <---------GLK1(1)  --------->At4g35610 --------->DAG2                <---------MYB52(1)  --------->ANAC46----------->ARR10<---------ZAT2     --------->YAB1                   --------->At5g28300 ------->TOE2(2)--------->LBD16 <---------At5g28300   <---------ANAC46                ----------->GT1 ============================HOX2a_HOX2a<----------DOF2  ---------->DOF2           --------->MYB52(1) ===========================HOX2a_HOX2a <---------DAG2----------->GT1     <-----------GT1   atctacgatatgtgtgtccagagatccgattattcacagcagctttatgaaaagtatcgtaaagtaattgaagattatactatccaaacggttagtacca  22005500                                <---------ZAT14                                --------->ZAT18                                --------->ZAT14                                         ---------->DOF2                             <---------ANAC58                                       --------->ANAC58                             <---------ANAC58                                       --------->ANAC46                             <---------ANAC46                                       --------->ANAC58                          <---------GLK1(1)                                       <---------DOF5.7(2)                         <---------ARR11(3)                                     --------->DOF5.7(2)               --------->MYB52(2)                                              <----------DOF2             <---------MYB52(1) <---------ZAT18                                --------->TOE1(3)             <--------P  --------->ARR11(3)                                    --------->TOE2(3) <----------DOF2    <---------ANAC46       <---------YAB1                --------->TOE2(3)   --------   aaacttttcatttgggttagtttcttagatatcgtgcacaaaaatatcaatgtgtgaagaaaacatgtttgtttttcttaactttaacgcaaaagatgta  22005600                                                                          <---------ANAC58                                                             --------->GLK1(1)                                                             --------->ARR14(1)                                                             --------->CCA1(2)                                                             <---------GLK1(1)                     <-                                  <---------RAP2.6(3)       <---------ARR14(2)                     --                           <---------REM1(1)                --------->ARR14(2)                    ---                           <-----------RAV1(1)              <---------ARR11(3)                 ------                           --------->ALFIN1                 --------->ARR11(3)                 ------                        <---------TOE1(3)                   --------->ARR11(1)                 ------                    <-------GAMYB ------>NtERF2   --------->YAB1          <---------ANAC58  <--------       <----------DOF2  <---------TOE2(3)<---------TOE2(3)----------->ARR10           --------->ALFIN1 --->GT1           <---------MYB46(3)<----------DOF2--------->ICU4      --------->ARR11(3)<---------KAN4(2)   atatagtctcttttttatgtgcggttaaggtgttgccgtctttaagggagaagcatgatgaagatatgctaagagagcttgttaagaggtggaataacca  22005700  Previous    Next  AGI:  At1g59790.1    Description:  cullin-related. similar to ATCUL1 (CULLIN 1) [Arabidopsis thaliana] (TAIR:AT4G02570.3); similar to ATCUL1 (CULLIN 1) [Arabidopsis thaliana] (TAIR:AT4G02570.2); similar to ATCUL1 (CULLIN 1) [Arabidopsis thaliana] (TAIR:AT4G02570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70971.1); contains InterPro domain Cullin repeat-like (InterPro:IPR016159); contains InterPro domain Cullin, N-terminal region; (InterPro:IPR001373) Range:  from: 22005169    to: 22007050    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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