Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ----------->RAV1(1)                        =========================RAV                     ============================RAV                     ----------->RAV1(1)                   ------>NtERF2                  --------->bZIP60(1)            --------->At4g35610                  --------->ANAC46               <---------At4g35610                  --------->ANAC58   <---------ZAT2                  --------->ANAC58   ----------->RAV1(2)                  <---------bZIP60(1)--------->At4g35610 --------->TOE2(3)                  --------->bZIP60(2)<---------At4g35610 --------->TOE1(3)               --------->ANAC46      --------->ZAT2     ----------->RAV1(2)                         - ---->DOF2    --------->SPL7    <-----------GT1  --------->ZAT2    <-----------GT1        --------->ANAC46   agacatggcaatagcatacgacgccacaacagttttaccagctgatgtatgagctgaaacctgaacatgaaaccatactcttcagttttctcacaaaact  21993400          --------->ZAT2          <---------ZAT2     <---------ZAT14     --------->ZAT14           <---------ICU4               <------ZmHOX2a(1)     --------->ZAT18          --------->ICU4               <----------ID1 --------->DAG2          <---------ANAC55(2)         --------->AHL20(2) --------->DOF2          --------->ANAC55(2)  <-----------GT1                 ----------->HVH21   agaaaagttcacagcttgaaccaaaatatgtaatctttacaaattgattcaccaattcaataggacagattagaaattcagtgaccaaaatcaattgaag  21993500                                                                                                  <--                                                                                                <----                                                                                               <-----                                                                                            <--------                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3)                               --------->ATHB51                                   --------->GLK1(1)                         --------->ANAC46                                     ----------->GT1 <------                         --------->ANAC58                                 ---------->DOF2 <---------At4g35610                   <---------WOX13(1)    <---------ANAC55(2)           <---------ZAT6     <---------ZAT2                <---------YAB1--------->ICU4                         <---------ANAC46 <----------DOF2     ---------->DOF2     --------->ANAC58--------->ANAC55(2)   <------ZmHOX2a(1)  <---------GLK1(1)   ccagagtaaaagcttaccatgactgactcgccattatcgagacacttgatagcttcagattggaaggagtcaagtgtaaaggggaaatctttagctggtg  21993600                                                                      <---------ARR11(3)                                                                 ------>MYB83                                                               ------->GAMYB                                                              <---------MYB52(2)                                                              <---------MYB55(2)                                                              --------->MYB46(3)                                     <---------LBD16         --------->ANAC58                                    <---------LBD16      --------->ANAC58                                --------->ICU4           --------->ANAC46                           <---------ANAC55(2)           --------->ANAC58 --------DOF2              --------->ANAC58            <---------DOF5.7(2)              <---------ANAC58 -----MYB46(3)             --------->ANAC58          --------->DOF5.7(2)                <---------ANAC58 ----AtMYB61               --------->ANAC55(2) <---------HSFC1(2)------>MYB46(1)        <---------ANAC46 -MYB46(3)                 ----------->GT1     --------->HSFC1(2)-------->P       --------->ATHB12 ---MYB52(1)            <------ZmHOX2a(1)  ----------->GT1   --------->ANAC58    <---------YAB1   gtttattgtgaacggagggagcaagaggaacgtaattttcagggaaggaaacatcgtgaacgcaaccaactagctcttcgttgatgatttgggtggaatc  21993700                         --------->At4g35610                         <---------At4g35610                       --------->ATERF1(1)                       <------NtERF2                     <---------DEAR3(1)                     --------->ALFIN1                     <---------ANAC46                    <---------At4g35610                    <---------LBD16                    --------->ATERF1(1)                    <------NtERF2                    ------>NtERF2                   <---------RRTF1(1)                   <---------RAP2.3(1)               <-----------GT1                  <---------RRTF1(3)         <---------ALFIN1    --------->ARR14(2)                  <---------RRTF1(2)       ------>ZmHOX2a(1)  --------->ANAC46                  <---------RAP2.3(3) <---------GLK1(2)       --------->ANAC55(2)                  <---------RAP2.3(2) <---------ARR14(2)      --------->ANAC58                  <---------RAP2.6(2) --------->KAN4(2)       --------->ANAC55(1)          <---------ZAT6                  <---------DEAR3(1) <---------HSFB2a(1)      --------->ANAC58         <---------ZAT14                 <---------LBD16     --------->HSFB2a(1)      <---------ANAC55(2)   <---------ANAC46                <-----------RAV1(1)  --------->HSFC1(2)      <---------LBD16      <---------ANAC58             <----------DOF2    --------->YAB1    <---------GLK1(2)               <---------ANAC58            <---------DAG2    --------->GLK1(2) <---------ATHB12 <---------ARR14(2) --------->ALFIN1          ------->TEIL--------->LBD16<---------HSFC1(2)    <---------REM1(2)      <---------ANAC46   gtcttctctctgaaccttttgcggcggagcagaatcagaagattcctccactgattttctcttcacggaacccatgagagaatggtgtgtgtagttttag  21993800       <------NtERF2      ------>NtERF2     --------->DREB2C(2)     --------->RAP2.3(3)     ----------->HVH21     --------->DEAR3(1)     --------->At1g77200    --------->ERF1    --------->ORA47(2)              --------->ANAC58                                  ---------->DOF2    --------->ATERF1(1)             --------->ANAC55(2)                             <----------DOF2    --------->RAP2.3(1)             --------->ANAC58                               --------->TOE2(3)    --------->DEAR3(2)            <-----------GT1                              --------->GLK1(1)   <---------At4g35610    <---------MYB52(1)                                   <---------GLK1(1)   --------->At4g35610   --------->LBD16                                    <---------TOE1(3)   --------->LBD16     <---------LBD16  *TSS  <---------------------WRI1    <---------TOE2(3)   ------>NtERF2      ------>ZmHOX2a(1)--------->MYB52(1)   <-----------HVH21 <XXXXXXXXXXXXXXXXXXXXMIR159A <---------LBD16  --------->ARR14(2)--------->ANAC46     <----------DOF2<----------DOF2    ----------   ttttccgccgacgagaaacgattcctccggtgagtttcacgaaacgaagacgatgaatactttgtcactctgcgttttagggtttcctttaagcccaatt  21993900                                                     <-------TEIL                                                  <------MYB46(1)                                                  <------MYB83<-----------GT1                                                  <---------MYB46(3)                                              <-----------RAV1(1)                         --------->YAB1                                            <---------At4g35610                           <---------ICU4                                       --------->ANAC58       ---------->ID1             <---------ATHB12                                       --------->ANAC46      <-----------GT1             <---------YAB1                                <-----------GT1 <---------MYB52(1)                 ------->TEIL                    <------------CBF   --------->ANAC58   <---------AHL20(2) <---------AHL20(2) -->CBF    ---------->DOF2  <---------AHL20(2)<---------MYB46(3)             --------->AHL20(2)<-----   ttgtttactcacttaaggcccaaattgtttttattttctccacgatagctgttggttcatttttttcccattggctcaatttatgaacttaatcattctg  21994000                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                         <---------AHL20(2)                                                        <---------ANAC58           <---------ARR11(3)                                                        <---------ANAC58           --------->ARR11(3)                                                        <---------ANAC46       <---------MYB59<------                                                 <---------YAB1                --------->TOE2(3)       ----------->GT1      ---------->DOF2<---------YAB1        ----------->GT1  <---------CCA1(2) ----YAB1            ---------->DOF2<---------ARR11(3)<---------AHL20(2)<-----------GT1  --------->AHL20(2)   aatataagaatgttaaacttttaaaaagaagaaaggaagataactctcattgttattttcttgtatgtagtaatttacatacctaaatcttttaatttaa  21994100                                            <-------GAMYB                                            <---------MYB52(1)                                          <<<<<<<<<<DREB1C                                          <<<<<<<<<<AtTINY2                                          <<<<<<<<<<DREB1A                                          <---------DREB2C(2)                                          <---------At1g77200                                          <<<<<<<<<<DREB2A                                          <<<<<<<<<<DREB1B                                         <<<<<<<<<<DREB1A                                         <<<<<<<<<<DREB2A                                         --------->DDF1                           <---------MYB52(1) <---------MYB46(3) -->AHL20(2)           <-----------------AG<---------DEAR3(2) --AHL20(2)            <-----------------AGL1 --------->MYB52(2)                                 <--- ->AHL20(2)          <-----------GT1     --------->RAP2.6(3)                                ------>MYB46(1) --AHL20(1)     <---------AHL20(2)--------->GLK1(1)                             --------->HSFB2a(2) ---AHL20(2)   --------->AHL20(2) <---------GLK1(1)                   --------->AHL20(2)    ------>MYB83   ttttagactaatgcaaattttatatacccgttttggatttcatgtcggtagtttcaaaacgtttttgtgcaaaaaaatacttctcaaactcaccaaattt  21994200                  <----------DOF2         --------------->AtSPL8                                                                <-----         <-----------GT1                  <---------AHL20(2)                              <---------AHL20(2)    <---------AHL20(2)              --------->YAB1                                 <-----------HVH21    --------->AHL20(1)           --------->WOX13(1)                             <---------DOF5.7(2)    <---------AHL20(1)          <---------AHL20(2)                <------------MYB.PH3(1) --------->AHL20(2)    --------->AHL20(2)          --------->AHL20(2)      --------->YAB1          <---------At5g28300   --------->AHL20(2)--------->AHL20(2)  --------->AHL20(2)     <-----------GT1<-----------GT1------- --------GT1<-----------GT1    --------->AHL20(2)  --------->AHL20(2)  <---------AHL20(2)--------->AHL20(2)   tacaattttattttctacctcttttaaatacaaattaatcatattaaatccaaaaaaataagaatgtaaccattttttttgttaccgtcaaatttataaa  21994300  Previous    Next  AGI:  At1g59760.1    Description:  ATP-dependent RNA helicase, putative. similar to HEN2 (HUA ENHANCER 2), ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT2G06990.1); similar to hypothetical protein OsI_036736 [Oryza sativa (indica cultivar-group)] (GB:EAY82777.1); similar to hypothetical protein OsJ_034372 [Oryza sativa (japonica cultivar-group)] (GB:EAZ20163.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67353.1); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001); contains InterPro domain RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:I Range:  from: 21988110    to: 21993840    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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