Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      -------->HAHB4                               ------>ZmHOX2a(1)                    --------->ATHB12                              --------->TOE2(3)                     --------->ATHB51                           <---------ARR11(3)                       <---------AHL20(2)                          --------->YAB1                            -------->ATHB1                        <---------TOE2(3)                           <---------ICU4                       --------->YAB1                              --------->ICU4                     <---------AHL20(2)                            <---------YAB1                     --------->AHL20(2)                            <---------ATHB51                  --------->ARR14(2)                             <---------ICU4                  <---------ARR14(2)                             --------->YAB1                 <---------CCA1(2) <---------AHL20(2)           --------->ICU4                     <-              --------->LBD16------>ZmHOX2a(2)                  <---------YAB1                     -- >DOF2       ------->GAMYB-------->HAHB4                      --------->YAB1                     ---- -AGL15  --------->MYB46(3)--------->ARR11(3)                <---------ZAT6                      <---   actacaaaactacaaccgcgtattttaatgatcctaaatatttgttttgatattcaatattcagtgataattattgtatagttttcaattgtacatttgt  21923000                                                               <---------At4g35610                                                    <---------AHL20(1)                                                    --------->AHL20(2)                                                    --------->AHL20(1)             --------->ATHB12                       <---------AHL20(2)            <-------TEIL                            <---------ARR11(3)    <---------YAB1                          ----------->GT1    --------->At4g35610  --------->YAB1                            <----------ID1   <---------ZAT14 --------bZIP60(1)              --------->AHL20(2)  --------->ARR11(3) ------->bZIP60(1)              <---------AHL20(2) --------->AHL20(2) ----->At4g35610           <-------TEIL    ----------->GT1   --------->ZAT14 ------At4g35610          <-----------GT1---------->DOF2  <---------ANAC46           --------->ANAC46   gctgtcatcatatattcatttgatcaatatacatttttttaaaaaaaggaaaaatatattctgtgaactgaacaatctcttacctatactaaacaaatcc  21923100                                      ------>MYB46(1)                                      -------->P                              <----------DOF2                     --------->ARR11(3)                       <-----------GT1               <--------                     <---------ARR11(3)                   --------->ATHB12                <---------ARR14(2)                 ---------->DOF2      ------>MYB83        --------->ATHB51               <---------CCA1(2)         --------->YAB1      ------>ZmHOX2a(2)            --------->AHL20(2) --------->ANAC58     <--        <---------YAB1     <---------ARR11(3)             <---------AHL20(2) --------->ANAC46  <-----     --------->GLK1(2)     --------->ARR11(3)    ---------->DOF2      ------>ZmHOX2a(1)--------->YAB1    <---------GLK1(2)--------->AHL20(1)  --------->ANAC46<---------AHL20(2)  --------->ANAC58  <-----   aaattagattctaataactaaaagatattgatctttcacctacatgtcattaaaagaaaattatttgccatcctaatccacacaaataagcatatcgtat  21923200                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                   --------->TOE2(3)        ---------                                                                  ----------->GT1           ---------       <---------ICU4                                             --------->YAB1            <--------      ======================================================================================MADS_MADS      --------------->AGL15                                <---------ANAC58                --------->ICU4      <---------------AGL15                                <---------ANAC46                <---------YAB1   <-----------GT1                  ----------->GT1   <---------REM1(1)              ----------->HVH21  --------->AHL20(2)         --------->DOF5.7(2)      <-----------RAV1(1)          --------->ANAC55(2) -ANAC46                    --------->TOE1(3)         <---------MYB46(3)       --------->YAB1 <------ -------AHL20(2)            --------->TOE2(3)      <-----------RAV1(1)<---------CCA1(2)  --------->YAB1 ----TOE1(2)               ----------->GT1     ------>MYB83<---------ANAC58 <---------------AGL15<--- ----TOE2(2)     <---------------AtSPL8        ------>MYB46(1)   <---------ATHB12  <---------ANAC55(2)   gtaatttactaattagagattagtacaaaacgttaaacaagataaaaccaaatgtgttgttgcttcaatcgtaaatctctaaaataagtgaccataattg  21923300 -------DAG2                                                    <-----------GT1 --------DOF2                                                <--------HAHB4 ------ANAC58 --------->DOF5.7(2)                            <---------ICU4                <---------ARR11(3) >ATHB12      <---------MYB52(1)                             --------->ATHB51              --------->ARR11(3) >ATHB51     <---------RAP2.6(3)         --------->AHL20(2) --------->ICU4     <---------WOX13(1)   > -ICU4    ------>NtERF2        <------------CBF             <---------YAB1    <------------CBF   ---- ---WOX13(1)<---------ANAC46  <---------ICU4       <-----------HVH21         --------->ATHB12    ---- ------ANAC58<-------GAMYB   <---------YAB1<-----------GT1--------->YAB1    <---------YAB1<---------CCA1(2)   ctttttggacgatgccgttaactcaccgataactattgcaaaatttaacaacttgtcatttcataattacccaaaattttcattgacttcacatatctca  21923400                 --------->YAB1            --------->MYB46(3)          <-----------GT1          *TSS  <---------ATHB12        <---------AHL20(2)     --------->AHL20(1)     <---------AHL20(1)     --------->AHL20(2)                                                       ------>MYB83   --------->ARR11(3)    <-----------GT1                                      --------->MYB52(1)   <---------ARR11(3) <---------ICU4           <---------------AGL15          ------>MYB46(1)   --------->AHL20(1)<---------AHL20(2)        ======================================================   <---------AHL20(1)--------->AHL20(2)        --------------->AGL15        <---------MYB46(2) >>>>>>>>>GT-3b------>MYB83                   --------->ANAC55(2)           --------->MYB46(3) ----->ANAC58  ------>MYB46(1)              <-----------GT1          <<<<<<<<<TBF1 <---------MYB52(1) ----->ANAC58 --------->WOX13(1)  <----------DOF2           ---------->DOF2--------->ANAC46   agaaaaatattttaaccaatcaaaaaattacttcttctttttttttttacttatttgtgaaaaaaagcttcttcttcaccaaacagtttgtctagttgtc  21923500                                                      <---------ANAC58                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                    --------->ARR14(3)                                                    --------->ARR14(2)                                                    <---------ARR11(3)                                                    <---------ARR14(2)                                            <---------ARR14(2)       <---------AHL20(2)                                            --------->ARR14(2)    <-----------ARR10                                   --------------->AGL15          <---------ARR14(2)                                   <---------------AGL15          <---------GLK1(2)                                  ----------------->AGL2          <---------ARR11(3)                                  ----------------->AG<---------ANAC58                 <-----------GT1  <-----------------AGL3          --------->ARR11(3)              --------->ARR14(2)  <-----------------AGL2   <---------ANAC46         <---------At5g28300    ---------->ID1      <---------ARR14(3)        <-----------GT1        <-----------GT1      --------->ARR11(3)  <---------At4g35610       --- ==================================================MADS_MADS      --------->ARR14(2)          -------   tgtgtctcatttaccatattttctctctaaatttttcccattactggatttgaagatcgtgtctggcagattttatctgattttctgatcagagagaagt  21923600                      <----------DOF2                                      <----------DOF2                    --------->At4g35610                                  --------->At4g35610          <----------DOF2                                       --------->DAG2 ----------->GT1    <---------At4g35610                        ---------->DOF2 ------->DOF2    <---------MYB52(1)                           --------->CCA1(2) ---->GT1 <---------DAG2                               ---------->DOF2   <---------At4g35610     ----   aaaaggaaacaacttttttgttagctttctctctctacaagttttgggtttttaagagaaagagataaaggagacagctttctctctctgtctctctcta  21923700                                                                            <---------WRKY12                                                                          <-----------HVH21                                                                       --------->ANAC55(2)                                                                       <---------ANAC55(1)                                                                       <---------ANAC46                                                                       <---------ANAC58                      <----------DOF2                                  <---------ANAC55(2)                     ------>ZmHOX2a(2)                                 <---------ANAC58            --                    <------ZmHOX2a(2)                              <-------GAMYB             --------                   --------->ARR11(3)                             <------MYB83              ---------                   <---------ARR11(3)                             <------MYB46(1)         <---------ANAC46                  <---------GLK1(1)                               <---------MYB46(3)    --------->At4g35610   <---------LBD16--------->GLK1(1)                              <---------AtMYB61   ---------->DOF2 --------->ARR11(3)--------->AGP1                          --------->CCA1(2)<---------WRKY38(1)  <--- ------>DOF2 ---------->DOF2                        --------->ALFIN1  <-----------------------TaNAC69(2)   aaagttctgggtttagaaagagatctttcttatatgttgaatttgtgatcagaggtgagagagatgggaggttgcgtgtcaacgcctaagagctgtgtag  21923800                                                                                              <------                                                                                             ------>ZmHOX2a(2)                                                                                             <-------                                                                                            <------ZmHOX2a(2)                                                                                           --------->ARR11(3)                                                                                           ------->TEIL                                                                                           --------->ARR14(2)                     <----------ID1                                                        <---------ARR11(3)                  ---------->DOF2                                                          <---------              --------->ANAC58                                                             <---------ARR14(2)             --------->WOX13(1)                     --------->At4g35610               --------->MYB52(1)        --------->MYB59                             <---------At4g35610            --------->At4g35610 --------->GT1--------->AtLEC2                   <-------TEIL                      <---------At4g35610 ->REM1(2) --------->WRKY18(1)                  --------->CCA1(2)                <---------CCA1(2) >ALFIN1<---------TOE2(3)                --------->ANAC58                       <----------DOF2 ---ZmHOX2a(1)--------->ANAC58           --------->ANAC58              <<<<<<<<<TBF1 ----------->HVH21   gaggtaaaataaggtcaagcaaaaggagaaagactcggacaagacgaaagattcagaagaagagagttgtttcttcttctcgcttatctgacggatcttt  21923900  Previous    Next  AGI:  At1g59650.1    Description:  CW14. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10410.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98316.1); contains InterPro domain Protein of unknown function DUF1336 (InterPro:IPR009769) Range:  from: 21923410    to: 21926588    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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