Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           ------>NtERF2                                        --------->DEAR3(1)           --------->SPL7         ------>ZmHOX2a(2)                                 --------->TOE1(3)           ---------->DOF2       <------ZmHOX2a(2)                              <---------ARR14(2)        --------->ANAC55(2)     --------->ARR11(3)                           <------NtERF2      -----        <---------ANAC55(2)     <-----------ARR10                           --------->LBD16   -------       <---------------AtSPL8   --------->ARR14(3)                         <---------ANAC46 <--------       --------------->AtSPL3   <---------ARR14(3)                         --------->DEAR3(1) -------       <-------TEIL             <---------ARR11(3)                        <------NtERF2    --------->ARR14(2)     <---------ARR14(2)         <---------ARR14(2)                        <---------LBD16  <---------ARR14(2)     --------->ARR14(2)         --------->ARR14(2)   <---------At4g35610  --------->ATERF1(1)-------- ---------->GT1      <---------ATHB12  --------->ORA47(2)              --------->MYB46(3)  --------->MYB52(1) -------->GT1   ------>NtERF2 ----------->ARR10      --------->At4g35610------->GAMYB     --------->MYB46(3) --->DOF2  <-------TEIL <---------ANAC46--------->DREB2C(2)     <---------MYB52(1)  --------->TOE2(3)   gagagaaaatacgtacagcgccaatggtggagacgatcttcgccgacttagactcatcttccctccgtttccaagcgccggagataccttcaataaccgc  21914500                                                                                                    <                                                                                                    <                                              <-------GAMYB                                        --          ----------->HVH21                 <---------AtMYB61   ------>MYB46(1)                    <-         <-----------HVH21              --------->At4g35610     ------>MYB83                       --        <---------ANAC55(2)             <---------At4g35610     --------->MYB52(1)          <--------        <---------ANAC58                --------->ZAT2         <---------ZAT14              ---------        <---------ANAC58                <---------ZAT2        --------->DEAR3(1)    --------->HSFB2a(1)        >>>>>>>>CAMTA3               --------->At4g35610      <---------MYB46(2)    <---------HSFC1(2) ------>RAV1(2)                   <---------MYB52(1)<------ZmHOX2a(2)   --------->MYB59     <-------- -->DEAR3(1)                      --------->DOF5.7(2)  --------->At4g35610          <---------HSFB2a(1) -At5g28300                   <---------At5g28300----------->ARR10   <---------GLK1(2)      --------- >GAMYB --------->ANAC55(2) <------ZmHOX2a(2)<---------MYB46(3)--------->ZAT14      --------->HSFC1(2) ->MYB46(3)          --------->ANAC46<---------At4g35610 <-----------HVH21         ------->TEIL   <--   ctgagacaacgcgtgactcatacgcgctggatcaccgttagcagctgtggttagatcagcatcaccgaactgattcggtccaacgaagcttcttctagaa  21914600                                              <---------MYB52(1)                                         ===============================HOX2a_HOX2a                                         ============================HOX2a_HOX2a                                         ------>ZmHOX2a(2)                                        --------->GLK1(1)         <-------GAMYB                  =============================HOX2a_HOX2a        <---------DEAR3(2)              ================================HOX2a_HOX2a        --------->MYB55(2)             --------->AGP1        <---------MYB46(3)             <-----------ARR10       <---------DEAR3(1)              <---------ARR14(2)      <---------MYB52(1)               --------->ARR11(3)     ------>NtERF2                     <---------ARR14(3)     --------->LBD16                   <---------AGP1    <---------DEAR3(1)                 <---------ARR11(3)   <---------LBD16                     --------->ARR14(3)                                --------->WOX13(1) ---------GLK1(1)                     <---------CCA1(2)                                 ------>ZmHOX2a(2) ---------HSFB2a(1)            <---------HSFC1(2)                         <---------ICU4<-------TEIL ------->GLK1(2)               --------->HSFC1(2)                 <---------TOE1(2)    <------ZmHOX2a(2) ----------ARR10             <---------ARR14(2)       <-----------GT1  --------->YAB1 --------->ARR14(2) ------->ARR14(2)          ------->GAMYB<---------GLK1(1)        ------>ZmHOX2a(1)    <---------ARR14(2) -HSFC1(1)                --------->ANAC46   --------->LBD16     =============================HOX2a_HOX2a >HSFC1(1)               <---------LBD16<------ZmHOX2a(2)        ==============================HOX2a_HOX2a -HSFB2a(2)             --------->MYB52(1)  --------->ANAC46  =================================HOX2a_HOX2a >HSFB2a(2)            <---------WRKY38(1) <---------LBD16    ------>ZmHOX2a(1)<---------ALFIN1 -------GLK1(2)        <---------WRKY12--------->ARR14(2)     ================================HOX2a_HOX2a   gaatctccggcggttgaaactccgttcaacggaaactgccagatctccgctagattaaacggtcctccttcgttcatcatcccactcggatccatcaact  21914700                                                        <------NtERF2                               <                                                       ------>NtERF2                                <                                                      --------->DEAR3(1)                         <---                                                      <---------DEAR3(1)                       <-----                                                     --------->ATERF1(1)                    -------->HAHB4                   --------->ANAC58                  <------NtERF2                          ---------                   --------->ANAC46                 <---------ATERF1(1)                    <---------ATHB12             --------->TOE1(2)                      <-----------HVH21                      --------->ICU4       --------->REM1(1)  ----------->GT1 --------->WRKY38(1)                              <---------YAB1  ----------->GT1  --------->ANAC58       --------->WRKY12                          ----------->GT1 <   taatcagttacaacacatacgacgaaaccagtaacaacaccgagttgactcagtcgtcgccgattcaaaaccagagagatagagaagagagaaatgattg  21914800                                                                                   ----------->RAV1(1)                                                                             --------->KAN4(2)                                                                          --------->AHL20(2)                                                                       --------->YAB1              --                                             <---------ANAC55(2)      --------->AHL20(2)           <-   <------MYB46(1)                           <---------ANAC58        --------->AHL20(2)            --   <------MYB83                              <---------ANAC58        <---------AHL20(2)          ---- ---------ANAC46                          <---------WOX13(1)      --------->AHL20(2)            ----- ---------ANAC58                        --------->ATHB12          <---------AHL20(1)            <---- ------RAP2.6(2)                       <---------YAB1             <---------AHL20(2)           ------ ------RAV1(1)                   <---------ANAC46                 --------->AHL20(1)  <---------ARR11(3) >ATHB12                       --------->ZAT14             ----------->GT1--------->YAB1   --------->AHL20(2) ---------ANAC58              --------->ALFIN1<----------DOF2     *TSS<---------AHL20(2)   <---------AHL20(2)   tggcttggtgagtatgcaaaactccttggactgtggagtctgtgattgcgttactgtgttcttgttaataaattaataatattcccaacatatttaaata  21914900          <---------AHL20(2)        <---------YAB1     <---------AHL20(2)     <---------YAB1                                                  <---------ZAT2   <---------ICU4                              <-----------GT1       --------->ZAT2  --------->ICU4                      <---------AHL20(2)             --------->At4g35610 ------->AHL20(2)                    --------->ARR11(3)              <---------At4g35610 --------AHL20(2)                    <---------AHL20(1)         <---------LBD16 --------->TBP                       --------->AHL20(1)        <---------LBD16                      < ------->TBP <---------AHL20(2)      <---------ARR11(3)     ------->TEIL                            < ---->AHL20(1)                       <---------AHL20(2)<---------ANAC58                <----------DOF2 -----AHL20(1)                       --------->AHL20(2)<---------ANAC46             <-----------GT1 < --->AHL20(2)--------->AHL20(2)     --------->AHL20(2) <---------ANAC58             <---------AHL20(2)   tataaatattattattttattcaagttttcagacataaatatatttgtttttctgtttcttgtacctcgggagctacggtgtttattaactttcacttca  21915000                                                          --------->TOE1(2)                                                      <---------ZAT18                                                ------>NtERF2                                               --------->O2                                        --------->At4g35610                                        ----------->RAV1(2) ------>MYB46(1)                      ----                               <----------DOF2 ===============================bZIP_DOF          <----                               ==========================bZIP_DOF                               -----                           --------->WRKY12    --------->TGA1a     <----------DOF2             ------          ------>ZmHOX2a(1)--------->WRKY45 ----------->HVH21--------->ANAC46                  <-----          ===================================HOX2a_HOX2a  --------->TOE2(2)                    ------         --------->TOE2(3) --------->WRKY38(1) <---------TGA1a<---------At4g35610              <-----     --------->GLK1(1)    --------->DOF5.7(2)  <---------O2 ------>MYB83                       <----- ---------ANAC46      ------>MYB83  --------->ARR11(3)<---------ZAT14                          ------ ---------ANAC58      ------>MYB46(1) ------>ZmHOX2a(2) ------->TEIL                   --------->AHL20(2) ---------ANAC58----------->HVH21   <---------ARR11(3)--------->ZAT18   <---------YAB1<---------YAB1   tggcgaggtttccttactctgacctatcgttgacttttgatcttctgcgacgcgagtgtacctacgctgctcttatgcttactgtttgattatttaagat  21915100           ----------------------->TaNAC69(2)                                                    ----           <-------GAMYB--------->ANAC58                                                         ----       <---------MYB46(3)                                                                       -----      <---------AtMYB61 --------->ANAC55(2)                                                     ----- -->ZmHOX2a(2)          --------->ANAC58                                                        ----- --ZmHOX2a(2)           --------->ANAC55(1)                                                   <------ ---->CCA1(2)           <---------ANAC55(2)                                                --------->ALFIN1 --->AGP1 --------->MYB55(2)                                     --------->YAB1     <---------ANAC46 ----AGP1 <---------MYB46(3)--------->DAG2        --------->ANAC58                --------->ALFIN1 --->ARR11(3)           --------->ANAC46        ---------->DOF2 <---------YAB1  <---------bZIP60(2)<- ----ARR11(3)  ----------->GT1           <---------YAB1     <---------DAG2      <---------ANAC58<---- ----ARR14(2)  <---------ANAC46          --------->ICU4     <----------DOF2     <---------ANAC58<---- --->ARR14(2)  <---------ANAC55(2)<---------ANAC46--------->ANAC58              <---------ANAC46<----   ctgaatcgatggtggttaagtgaaacacgtaaggctatgtgtgataatgggaaagaaacatactttatgaaaatggaaaatgacttgggggaagtgggga  21915200    <---------TOE2(2)    ------->TEIL    <---------TOE1(2) --------->ANAC58 --------->O2 ===================================================bZIP_DOF --------->ANAC46 --------->TGA1a <---------O2 <---------TGA1a                                                          <---------ANAC46 --------->ANAC58                                                       --------->ALFIN1 ----->DEAR3(2)                                                        <---------AtMYB61 ----->TCP15(2)                                                 --------->ATHB12 ---->PCF2                                                      <--------ATHB1 ---->PCF5                                                      --------->YAB1      --------->ICU4 ---->ARR14(2)                                        --------->ATHB12 --------->ALFIN1<---------ANAC46 ---PCF2                                       --------->ATHB12<---------ATHB12   --------->YAB1 --------ALFIN1                            --------->ATHB12    --------->ICU4   <---------AHL20(2) -----ARR14(2)                           <---------DAG2        <---------ATHB51 --------->AHL20(2) <- -----TCP15(1)                           <----------DOF2<---------ANAC46<---------MYB46(3)         == -----TCP20    --------->GLK1(2)     <---------ZAT18 <---------ZAT6   <-------GAMYB<---------TOE2(3)   cccacgtatgtttcgataatctgtttttgggtttagtaatgccctttattgattagtgatgggcaatgatggggttgtggattttaatgatgtgtaagta  21915300                                                                     --------->ICU4                                                                   --------->YAB1                       ------>NtERF2                              <---------YAB1                      --------->ANAC58                          --------->YAB1                      --------->ANAC58                        ------>MYB46(1)                      <----------ID1                          --------->MYB52(1)                      --------->ANAC46       <---------YAB1   ------>MYB83                     --------->ATERF1(1)----------->GT1     <---------MYB59          --------->At4g35610           <------MYB83        <---------MYB46(2)       <------ZmHOX2a(2)         --------------->AGL15    ------>MYB46(1)      <---------ARR11(3)         <---------------AGL15    ------>MYB83<---------ICU4      --------->ARR11(3)        <-----------------AGL3--------->HSFB2a(2) -----ZmHOX2a(1)    <---------ATERF1(1) <------MYB46(1)   -------->P <---------YAB1     <---------REM1(1) =============HOX2a_HOX2a    <---------ATHB12--------->ICU4 <---------MYB111(1)        <---------TOE2(3)   aggactaagatcatctccaaggagacgccaaatcactaaatttggtgataattcttctccaacctaacatcataatggatgccatatttgatgtaacatt  21915400  Previous    Next  AGI:  At1g59640.1    Description:  ZCW32 (BIGPETAL, BIGPETALUB); DNA binding / transcription factor. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G62610.1); similar to MYC1 [Catharanthus roseus] (GB:AAQ14331.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 21912840    to: 21914866    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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