Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->AHL20(2)                                                           --------->AHL20(1)                                                           <---------AHL20(2)                                                           <---------AHL20(1)                   <----                                                          --------->AHL20(2)                  -------                                                          <---------AHL20(2)                 <-------                                                   --------->ANAC46                      --------->AHL20(2)                                                 <---------ALFIN1              <---------ARR11(3)                                                 --------->ANAC58              --------->ARR11(3)<---                         <-------TEIL            --------->ANAC58        --------->TOE2(3)<---------AHL20(2)            --------->YAB1                       --------->ANAC46====================================         ------>ZmHOX2a(1)  --------->ANAC46 --------->AtLEC2    ----------------->AG  --------->TOE2(3)   aaatgcccttcctataatacacacacatacacatcaaattagttgccatgcacacatcaaataaattgccaaaaacatcaatatctatacattaaatcat  21891000                                        --------------->AGL15                                        <---------------AGL15                                       ----------------->AGL3                                       <-----------------AGL2                                 <---------AHL20(2) -----YAB1                       --------->AHL20(2)                               ---------->DOF2 -->YAB1                        --------->AHL20(2)     --------->AHL20(2)       <---------YAB1 --ATHB12                 ----------->GT1      ----------->GT1               <---------AHL20(2) ------ICU4           <----------DOF2<-----------GT1  --------->YAB1<---------ANAC46                < ========================================================MADS_MADS<-----------HVH21            <-----   aaatacttggaaaactccaactagcttttggttataaaattactaaatatagtttaaaataatacatccgtcgtggaaatttatgaaagatagacttctt  21891100                                                  --------->ANAC55(2)                                                  --------->ANAC46                        <---------ICU4                                                  <---------ANAC58                       <---------YAB1                                                  <---------ANAC58                     --------->YAB1                                                  <---------ANAC55(2)            <---------HSFC1(2)                                       --------->DOF5.7(2)                       --------->HSFC1(2)--                                      --------->TOE2(3)                          --------->HSFB2a(1)                                      --------->TOE1(3)                          <---------HSFB2a(1)              --------->ANAC58      ------>MYB46(1)     ------>ZmHOX2a(2)   --------->LBD16        --              --------->ANAC58      ------>MYB83  <---------ANAC55(1)       ------>ZmHOX2a(1)      --   <---------ANAC58                --------->MYB52(1)   ===========================HOX2a_HOX2a   ----   <---------ANAC58          --------->YAB1      <-------TEIL               --------->HSFB2a(2)  <---  <---------At4g35610   <---------ATHB12       --------->TOE2(2)            <---------HSFB2a(2) ----- -----------GT1       --------->WOX13(1)   --------->YAB1          <----------DOF2    <---------YAB1 -----DOF2    --------->ANAC46    --------->AtMYB61 ----------->HVH21      <---------LBD16--------->YAB1   ttttagcttatgccccaaggaagtcaatcaataagaccaacgttatcaacatacgtgatcgatgatgttcttttattcctggaaacttcttataatcacc  21891200                                                                                            <--------                                                                                           --------->WRKY18(1)                                                                                          <----------                                                                                         --------->LBD16                                               ------>ZmHOX2a(2)                         ----------->GT1                                             <---------ARR11(3)                        ------>ZmHOX2a(2)                                             --------->AGP1                            ==============                                             <---------ARR14(2)                      --------->ARR14(2)                            <---------AHL20(2)<------ZmHOX2a(2)                  <---------At4g35610 ------->ANAC58            --------->AHL20(2)--------->ARR14(3)                  --------->At4g35610 ------->ANAC46        <---------ARR11(3)    <---------ARR14(3)                  ----------->RAV1(2) ------->ANAC58        --------->AHL20(1)    --------->ARR14(2)             --------->REM1(1)  <----- ------->RAV1(1)       <---------AHL20(1)    --------->ARR11(3)      <-----------GT1 <---------ARR14(2) ------ALFIN1          --------->AHL20(2)   --------->GLK1(1)     <---------REM1(1)----------->HVH21 ---->MYB46(3)  <----------ID1        --------->GLK1(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ---   cacacaaaaacaaaaaaaaaaacaaaatattaaatacaaaattctgagatcttgacattttgaccaagttgtaacgcttcatcatctgatccggtcaaat  21891300                                               --------->LBD16                                              <---------ANAC58                                              ----------->GT1                                              <---------ANAC55(2)                                              <---------ANAC58                                              --------->O2                                              <---------ANAC46                                              <---------O2                                         <-----------RAV1(1)                  <---------O2                                        <---------YAB1           <---------YAB1                                     <---------YAB1              --------->AHL20(2)                                  --------->ICU4                 <---------AHL20(2)                                  <---------AHL20(1)            --------->TOE2(3)                                  --------->AHL20(1)          --------->AHL20(1)                                  <---------ARR11(3)<---------ARR11(3)        <---------ANAC55(2)       ------>ZmHOX2a(1)     ----------->GT1<---------ANAC46  --------->AHL20(2) -WRKY12               <---------YAB1<---------AHL20(2)       <---------AHL20(1) -HVH21<----------DOF2------------>CBF <------------CBF       <---------AHL20(2)      --------->YAB1 =============HOX2a_HOX2a  ---------->DOF2<-----------HVH21--------->AHL20(2) --------->TGA1a ----GLK1(2)      <---------ZAT6  --------->ARR11(3)--------->ARR11(3)        --------->O2 ------>TOE2(3) --------->YAB1 --------->AHL20(2)  --------->GLK1(1)     --------->ANAC46--------->YAB1   tcttaaatcctttttctatagtattacaataaagaaaatattattgtcgcgtgaaatcttttaaaatattaatacaaatcacgtctattaataacaaggt  21891400                    --------->ARR14(2)                    --------->ARR11(3)                    <---------ARR11(3)                    <---------ARR14(2)                 *TSS                                                                         XXXXXXX        ---------->ARF1   --------->TOE2(3)                      ------->TEIL           ---------->DOF2        ---------->ID1  <---------YAB1                          <---------GLK1(2)    ----------->GT1   cgtcactcttgtctccaaaacaaatcttcattaaccaaaaccaaaaaaaaaaacttgaaactctctgaatctcacaagaacattgcaaggtaaagaaacc  21891500                                                      --------->ANAC58         --------->ANAC58                                        ------>ZmHOX2a(2)                      --------->ANAC58                                       <------ZmHOX2a(2)                   --------->ANAC58                                       --------->GLK1(1)                   --------->ANAC58                                       <---------GLK1(1)                   --------->ANAC46                   --------->ICU4     <---------ARR11(3)               --------->ANAC58              ----------->GT1         --------->ARR14(2)             ---------->DOF2   <------ZmHOX2a(2)                  <---------AGP1  --------->ANAC58 --------->ANAC58  --------->ARR11(3)                  <---------ARR14(2)          --------->ANAC58  <---------ARR11(3)                  --------->ARR11(3)          --------->ANAC58                 <- XXXXXXXXXXXXXX>MIR2935              <---------CCA1(2)--------->ANAC46--------->DAG2  <---------MYB52(1)   acaagatcatcactcgaagtaaaaatggtgagcccatttagatctccatgttcttcacccaaaaaatcaagaaaagcaagcaagaacccttattcaaatc  21891600                                                                                     <------NtERF2                                                                                     ------>NtERF2                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                    <---------ALFIN1                                                                                  --------->ATERF1(1)                                                                                  <---------ANAC58                                                                                  --------->PCF5                                                                                  <---------ANAC58                                                                                 --------->PCF2                                                                                 <---------PCF5                                                                                 --------->ATERF1(1)                                                                                 <------NtERF2                                                                                 ----------->TCP11(1)                                                                                ------>NtERF2                                                                                <-----------TCP11(1)                                                                                --------->ABI4(2)                                                                             --------->LBD16                                                                           <---------LBD16                                                                         <---------ARR14(2)          <---------GLK1(2)    --------->ZAT2                            --------->ARR14(2)        --------->AHL20(2)     --------->STY1(2)           <---------HSFB2a(2) --------->ALFIN1    ----------->GT1            <---------ZAT2              --------->HSFB2a(2)<---------MYB52(1) --------ZAT18     <---------At4g35610          ---------->DOF2        ----------------------->TaNAC69(2)   gtggacttgataaattctctgagcttctctccgagctagacgagaagaggcaaagcatctactcgaagaagctcgattccggtggcccgcctcttgttcg  21891700                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                      --------->ALFIN1                    <---------ANAC58                    <---------ANAC46                                                            -----                 <---------MYB52(1)                                                     --------->At4g35610                --------->LBD16            <------ZmHOX2a(2)                        <---------REM1(1)              <---------LBD16      <---------YAB1                               --------->ARR11(3)           --------->ZAT2       <---------MYB52(1)                              <---------ARR11(3)          --------->ANAC58     <-------GAMYB     <---------CCA1(2)        --------->ANAC58     ------          --------->ANAC58   <------NtERF2<---------ARR11(3)              --------->ANAC58    -------     --------->ZAT18<---------ANAC58      --------->ARR11(3)           <----------ID1   <---------At4g35610   atttgtgttcacaagctccggtgagtgtgtccccgttgtgatcagatcatcttatcttcacaagaagaacaagaagacgaaagatgttgtagctgataaa  21891800                                                                      <---------At4g35610           <                 --------->ANAC58                                     --------->ZAT2               <-                 --------->ANAC58                                     <---------ZAT2    --------->GLK1(2)             --------->ANAC58     <---------ATHB12                    <---------ZAT14   --------->ARR14(2) ------>GT1  --------->ANAC58   --------->GLK1(1)                     --------->At4g35610          -- --->DAG2  <<<<<<<<<WRKY18      <---------GLK1(1)       XXXXXXXXXXXXXXXXXXXX>MIR415     <---------ARR14(2) --->DOF2 --------->WRKY18(1) <------ZmHOX2a(1) ----------->RAV1(2)   --------->ZAT14  <---------GLK1(2)   gtcaaaacagaagtcaaggaagcaaaaacagaggaaatcaagaacacagagcctgaaacagagcaaaaacagagctgtgttataaacgagaatctgaaga  21891900  Previous    Next  AGI:  At1g59590.1    Description:  ZCF37. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10220.1) Range:  from: 21891417    to: 21892457    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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