Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                     <-----------RAV1(1) --------->ICU4   <---------YAB1                                                   <---------YAB1    <---------AHL20(2) ----MYB46(1)         <---------YAB1                             <---------AHL20(2) --------->TOE2(3) ----MYB83           --------->AHL20(1)                          <---------YAB1 <---------AHL20(2) ------AtMYB61       --------->AHL20(2)                   --------->AHL20(2)   --------->AHL20(2)  -- ------TOE2(2)       <---------AHL20(1)                   <---------AHL20(2)   <---------AHL20(2)---- ------TOE1(2)       <---------AHL20(2)               --------->AHL20(2)<---------MYB46(3)<---------ICU4   aggtttttattcggtttccatattatattagaatgtattatttgttatttaacaaaaaatataaatttttattgttgttgattaaatattaattagtaga  21884900      <---------AHL20(2)     <---------YAB1                                                                              ----   <---------ICU4                                                                       <-----------GT1   --------->ATHB51                                                                     <---------AHL20(2)   <--------HAHB4                                                                  --------->ARR11(3)   --------->YAB1                                                                  <---------ARR11(3)   <---------AHL20(2)              <---------YAB1                                  --------->AHL20(1)   -------->ATHB1          --------->TOE2(3)                                    <------ZmHOX2a(1)<---   -------->HAHB4          ----------->GT1                                    <---------TOE1(2)  ----  <---------YAB1          ----------->GT1                                     <---------TOE2(2)  <---  <---------ATHB51 --------------->AGL15                                     ------>ZmHOX2a(1)   ----  --------->ICU4   --------->HSFB2a(2)                                      --------->TOE1(2)    <--- ------->AHL20(2)  <---------------AGL15            <---------AHL20(2)      --------->TOE2(2)    <--- ------->GT1       <---------HSFB2a(2)   <---------YAB1  ----------->GT1--------->RVE1(1)       -----   agtaattattaatggggttttctaaaaaatgttaaatatgagtattatttgttttaaatttgttaatttgcaaaaaatcctaggatatattaacttgaat  21885000         <---------AHL20(2)         --------->AHL20(2)        --------->AHL20(2)        <---------AHL20(2)                        <----------DOF2     --------->ATHB12                     <-----------GT1 ----->ARR14(3)                        <---------AHL20(2)                                           - ------ARR14(3)                       <---------AHL20(2)                                         ---- ----->ARR11(3)                       <---------AHL20(1)                                       ------ ------ARR11(3)                   <---------AHL20(2)     <---------AHL20(2)                    <----- ----->ARR14(2)                   --------->AHL20(2)     --------->AHL20(2)        <---------YAB1---- ------ARR14(2)                  <---------WOX13(1)  <---------YAB1       <----------ID1      <------ --------ARR10          <-------TEIL  --------->AHL20(2)<---------WOX13(1)----------->GT1     ------- ---->RVE1(1) ----------->GT1 <---------YAB1 <----------DOF2           ---------->DOF2   ---------->DOF2   atcttcttgattaaatttgtgaaacattcattttgattaattaatttcttttcttttgattaattagttttttaaaaggaaaaatgttattgaaagaaat  21885100                                                        <---------ATHB12                                                       ------>MYB83  ----------->GT1                                      ------>MYB46(1) --------->DOF2                                       --------->WOX13(1)                     -------- ----->TOE2(3)                                      <xxxxxxxxxxxxxxxxsmallRNA(s)            <-------- --->ARR11(3)                                       --------->MYB46(3) <----------DOF2      <<<<<<<<<ARR2 ----ARR11(3)                         <---------At4g35610  --------->ANAC58               --------->WOX13(1) ----->TOE1(3)          --------->WOX13(1)--------->ALFIN1 --------->ANAC58             ------------>CBF ---GLK1(1)           <---------ATHB12--------->At4g35610---------->DOF2               <-----------GT1 -->GLK1(1)  <----------DOF2 <---------YAB1      <xxxxxxxxxxxxxxxxxsmallRNA(fl3)   <----------DOF2   cttaaagttaaatgactttctcaaatcaattactattggtagcagagggggagaaccaatcaagccctaattcctttagaaaacccttttaacaatcaaa  21885200                                                                   <---------AHL20(2)                                                                *TSS   <-------TEIL                                                           <---------AHL20(2)                                       --------->YAB1      --------->AHL20(2)                          --------->ICU4                   --------->AHL20(1)  <------------CBF      <----------DOF2--------------->AGL15   --------->AHL20(2)          <--------- ->YAB1--------->WRKY18(1)--------->AHL20(2)        ---------->DOF2--------->AHL20(2)      <---------DAG2 -ATHB12   ------------>CBF            <---------------AGL15   <---------AHL20(2)      <---------ZAT14   atagtattggtcaaacaatatttctgcattaattagttttttcatatttagcaaaaaagaattaattaaaaaattcatccctattcgacttcactttctc  21885300                                                       <---------RAP2.6(3)                                                       ----------->RAV1(1)                                                       ------>NtERF2                                              ---------->DOF2                            --------->ZAT14                                              <---------ZAT14                            <---------ZAT14                                           ----------->GT1          ------>ZmHOX2a(2)   <<<<<<<<<<<<<                                      ---------->DOF2 <---------ETT(1)<---------ANAC46 --------->ZAT14                                 <---------DEAR3(1)   --------->RAP2.6(2)              <---------ZAT14  ------>NtERF2   ------>ZmHOX2a(2)<------NtERF2  --------->ALFIN1--------->ARR11(3)   --------->ZAT18 -DOF2        <---------YAB1    <---------LBD16--------->DAG2     <---------ARR11(3)   --------->REM1(2)   tctctgcctgaaaattttgatcggtttctggtttctcggcgaaagaagtaaagtggccgacaaatagtgatctcgtgaaggaatcagtgtgtacagtgga  21885400                                          --------->ATERF1(1)                                          <------NtERF2                                         <-----------HVH21                                         ------>NtERF2                                         <---------ATERF1(1)                                        --------->O2                                        --------->bZIP60(1)                                        <---------ANAC46                                        <---------O2                                        <---------bZIP60(1)                                        <---------DEAR3(1)                                        <---------ANAC58                                        <---------ANAC58                                        --------->DEAR3(1)                                       --------->ATERF1(1)                                       --------->RRTF1(1)                                       --------->RAP2.3(1)                                       <------NtERF2                                      ------>NtERF2                                      <---------ATERF1(1)                                      <---------ERF1                                      <---------DEAR4(2)                                      <---------RAP2.3(1)                                      <---------ORA47(2)                        <------MYB46(1)                                     <---------RAP2.3(2)                       <---------AtMYB61                                     <---------RAP2.6(2)                       --------->MYB59                               <---------ANAC58                            <------MYB83           <--                               <---------ANAC58              <-----------RAV1(2)<------MYB83    <----                               <---------ANAC46    <---------ARR11(3)      <------MYB46(1)<---------ANAC58       <-------TEIL       <-----------RAV1(1)   <----------DOF2 <------ZmHOX2a(1)         <---------ANAC58   <---------YAB1     <-----------GT1<---------RAP2.3(3)     <---------LBD16 <--------P <-----------GT1 <<<<LFY           --------->ARR14(2)<---------DEAR3(1)    -------->P    <-----------RAV1(2)  -------   agaagatgatacatttggctggatttacatgttgcttaggcggcgtcgctctttatcttcttaccaggagcacaggcaggttaggttttttttcttgtct  21885500                                                                       --------->GLK1(1)                                                                      --------->ARR11(3)                                                               <---------PCF2                                                           <---------LBD16            --------->STY1(1)                                                          <---------ANAC58         --------->YAB1     <-----------GT1             <---------MYB52(1)       <---------ANAC46        <---------ATHB12 ---------GT1              <---------ZAT14                <---------ANAC58    <---------ATHB12    --- ------DOF2            <---------TOE2(3)  <---------MYB46(3)  ----------->HVH21 --------->WOX13(1)--- --->ID1      <---------YAB1   <---------ZAT6          <----------DOF2<---------ARR11(3)<---------TOE2(3)   ttactatttacgaattacgataactagggtttactgttattcggtggtaatgttcttctttcgtgggacagagatatcaaatcaatcactagggtttacc  21885600                                                  <---------MYB46(3)         <---------YAB1      --------->ARR14(2)                         --------->ALFIN1 <---------ANAC55(1)      <---------ARR14(2)                       <---------ANAC46   --------->ANAC55(2)               - --->MYB46(1)                                 <---------TOE2(3)   <---------ANAC46          --------- --->MYB83            ------>ZmHOX2a(1) <---------------AGL15     <---------ANAC55(2)  <---------YAB1   aactcaaggatttgggtaatgttcctgcattgttctgcatttcaattttaggtggatgggttttggttatgtgtttgatatcattcgtttttattcagaa  21885700                                   <---------ICU4   --------->ARR11(3)                                  <---------YAB1    <---------ARR11(3)                                --------->YAB1   <------ZmHOX2a(1) -------->ICU4               <----------DOF2  <-----------RAV1(2)           <---------ANAC55(1) >YAB1                --------->ALFIN1   <---------TOE1(2)             ------>ZmHOX2a(1)         <---   caattagtagaagtagagagcaaggtggtacctttgatcatcgcagtatcaggagatgttggctctgagactcctattaagtgtgagcatagttatgttc  21885800  Previous    Next  AGI:  At1g59560.1    Description:  ZCF61; protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G63900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22469.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 21885264    to: 21887457    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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