Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ANAC58               <----------DOF2                              --------->ANAC58       <---------ANAC46          <----------DOF2    <---------MYB52(1)                          <----      <---------LBD16        --------->MYB46(3)    <---------MYB52(1)                ------>ZmHOX2a(2)   <---------ANAC58         <---------At5g28300   --------->LBD16<------NtERF2      <------ZmHOX2a(2)   <---------ANAC58     --------->TOE2(3)       <---------LBD16 --------->ANAC58   --------->ARR14(2) -------MYB52(1)        <----------DOF2       <---------SPL7--------->ANAC58       <---------ARR14(2) ----GT1  <----------DOF2  <-----------GT1 ------>NtERF2    --------->ANAC46<---------AHL20(2)  <----   gtttgtcttgcggtttactttcacatctttaaccgctttgttcgaggccctccggtttgtttaagccagcaattctagttaatcggatcgatctattagc  21864600                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                      --------->AGP1                      --------->ARR11(3)                           <---------ANAC58                      --------->ARR14(2)                           <---------ANAC58                      <---------ARR11(3)                  --------->ZAT2                      <---------AGP1                      <---------ZAT2                      -------                      <---------ARR14(2)           --------->MYB52(2)                      <---------ANAC55(2)       <---------MYB46(3)                        <--------P        <---------ANAC46        --------->ANAC55(2) -----ANAC58         <---------CCA1(2)    <---------YAB1  --------->At4g35610             ----------- -----ANAC58        ----------->ARR10 <---------GLK1(2)   <---------At4g35610         <---------ZAT6   ttgttagagttgttagggacattagatcttcagccttccatattcttattggtaagttggagctgaatagcgtagtagagtcttagcagtgttatgtacc  21864700                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <        --------->ATHB51                                                                            <        <---------ICU4                                                                              <        --------->ATHB12                                                                            -       --------->ICU4      <---------ARR14(2)                                                      --     <---------ICU4        <---------GLK1(2)                                 <---------AHL20(2)    <-     --------->YAB1        --------->ARR14(2)                               --------->AHL20(2)     <-    <-------TEIL   <---------AHL20(2)                              --------->WRKY18(1)             <- >TEIL <---------YAB1     <------ZmHOX2a(1)    ------->TEIL       <-----------HVH21           <------ ---->AtSPL8   <---------AHL20(2)      --------->GLK1(2) ----------------->AGL1              ------->TEIL   cacatattcattattgtttatttatagaggattcttgagataatctctgcatctatgctaccatttccagtcaaaccatataatgtattcgaatggatgt  21864800          ------>NtERF2         --------->ZAT18         <---------ZAT18       <---------At4g35610       --------->At4g35610     <------NtERF2     --------->ATERF1(1)   <---------DEAR3(1)  <---------------------WRI1  <------NtERF2  --------->ATERF1(1)  <---------LBD16 <---------ATERF1(1) ------>NtERF2 --------->LBD16 <---------RAP2.3(1) <---------ORA47(2) <---------ERF1 ---------RRTF1(2)                                                                               ---- ---------RAP2.3(2)                                                                          -------- ---------RAP2.3(3)                                                                     --------->AHL20(1) ---------DREB2C(2)                       <-----------GT1                               <---------ARR11(3) ---------RAP2.6(2)                   <-----------ARR10                                 --------->ARR11(3) ---------ATERF1(2)                   <---------ARR14(2)                                <---------AHL20(1) ---------DEAR3(1)                    --------->ARR14(2)                              <---------AHL20(1) -------->ATERF1(2)                  <------NtERF2                                    --------->AHL20(1) ------->ATERF1(1)                 <---------ANAC46      <-----------GT1              <---------AHL20(2) --------ANAC58             <---------ANAC58  --------->LBD16            <---------ANAC46    <------- --------LBD16              <---------ANAC58 --------->ANAC46           <-----------------------TaNAC69(2) --------ANAC58             <---------ANAC46<---------LBD16 <----------DOF2     ----------->GT1  <--- -----RAV1(1)  --------->ANAC46 <---------RAP2.3(3)    <---------AHL20(2)<---------------AGL15   <---   tgccggcggagcggactaggcaactctatttcttggggcggatttatccgcatcaaatttatctttatgtaagagccgtatgtagtaaaatatttttaat  21864900                                                                                        ---------->DOF2                                                                                      <---------YAB1                                                                                    --------->YAB1                                                                                  -------->P  <---------LBD16                                                                ------->GAMYB  <---------ANAC58                                                              <---------MYB111(1)  <---------ANAC46                                                         <---------At4g35610  <---------ANAC58                        --------->AHL20(2)               --------->LBD16  --------- ----->AHL20(2)                     --------->At5g28300                    --------->At4g35610 ->AHL20(2)                        ----------->GT1            --------->MYB52(1)--------->MYB46(3) --AHL20(2)                    --------->ATHB12        --------->ANAC46   --------->ANAC46  <-------- ------ICU4                   <---------YAB1  --------->YAB1<---------MYB52(2)  <---------MYB111(2) ------AHL20(2)        <---------YAB1    --------->AHL20(2) --------->MYB46(3)  <---------MYB55(2)   tttttcgggcatattaagacggactataattcatgaatggtaaataaaaaataatctactccacaaacggatttatccgctaacaaccatgaaagagaaa  21865000                                                                       --------->ARR14(3)                                                                       --------->ARR11(3)                                                                       <---------ARR14(3)                                    <---------TOE1(3)                ----------->ARR10                                    <---------TOE2(3)           --------->ANAC58                                <------------CBF                --------->ANAC46               --------->ZAT14<---------MYB52(1)                --------->ANAC58    <---------AHL20(2)       <-------GAMYB               --------->ANAC46              --------->ANAC58    --------->AHL20(2)      <---------MYB46(3)           --------->ANAC58              --------->ANAC58   --------->AHL20(2)    ------------>AtMYB77            --------->ANAC58        --------->ANAC58 --------->ARR11(3)    --------->RAP2.6(3)            ----------->HVH21<---------ARR11(3) <---------ARR11(3)   <---------ARR14(2)       *TSS  <---------WOX13(1)<---------GLK1(2) -->GT1        <---------ZAT14--------->ICU4 --------->ANAC46   --------->ANAC55(1)  ---------->DOF2 --ID1<------------CBF--------->ARR14(2)     <---------ALFIN1 <---------ALFIN1   --------->ANAC58 <--   aaagatttaattgtcactgtagcaaatcggcagttattgaggtttccccgctccgattgacgcaacacgccaagattttgccaacgctaaagcaaatcag  21865100          <---------ZAT18          --------->ZAT18          --------->ZAT14                            <---------YAB1     --------->CCA1(2)                              <---------AHL20(2)    --------->ARR11(3)                              --------->AHL20(2)    <---------ARR11(3)                     <---------At4g35610                    ----------->GT1    <---------ARR14(2)        --------->ANAC58     --------->AHL20(2)           ----------->GT1    --------->ARR14(2)        --------->ANAC58 --------->ICU4              --------->CCA1(2) ----ZmHOX2a(2)    <---------CCA1(2)       --------->At4g35610        ---------->DOF2              <-   atcgaagatttgtgctctcttctatctctcactcgcatcgaattcagcaaaaattaaaattgaagaacgagtcaaagatagagagagaaaaaccctattc  21865200                                                                                                -----                                                                                               <-----                                           ----------->GT1                                     ------        ------>ZmHOX2a(2)               ----------->GT1                                        <-----       <------ZmHOX2a(2)               <---------MYB46(3)                                --------->ANAC58      --------->ARR11(3)        --------->ATHB12                                         --------->ANAC46      <---------ARR11(3)        --------->YAB1                                 --------->HSFB2a(2)  --------->ANAC55(2)    --------->At4g35610                          <-----------GT1    --------->ANAC58  <---------ANAC55(2)    <---------At4g35610                 <---------DEAR3(1)<---------HSFB2a(2) <- -----ZmHOX2a(2)<---------TOE2(3) --------->At4g35610  <---------WRKY38(1)  ------>ZmHOX2a(1) <------   gatcacgagatcgtaatcaacgtttttagcagaatcatcggagggtagaaaaaatgctcaacgatggcgaagtaactccttctaggtaaacaagtcagat  21865300    ---------->ID1   <------------------------ANAC81  <-----------RAV1(1) ---->GLK1(2) ----ARR14(2)         <---------ANAC58    <---------ZAT14 --->ARR14(2)         <---------ANAC58    --------->ZAT14 ----GLK1(2)<---------YAB1         --------->ANAC46 ---------DOF2      ------>ZmHOX2a(2)     --------->At4g35610                 ------->TEIL ---At4g35610     --------->ARR11(3)<-----------HVH21               <---------------AGL15   tcttttgttgttctatgtttgatctcgtgcttagttccagtcactgctcaaattgaaatgagatagttttctatttgatgaattttgttattccaccatg  21865400                                                           <---------ANAC58                                                           <---------ANAC46                         <---------ANAC58                  <---------ANAC58                         <---------ANAC58              ------>ZmHOX2a(2)                         <---------ANAC46            --------->ARR11(3)           <----------DOF2                     <---------ARR11(3)       <---------AHL20(2)                <---------At4g35610   <---------ANAC58  --------->ARR11(3)   <---------AHL20(2)                    --------->At4g35610   <---------ANAC58<---------TOE2(3)      --------->AHL20(2)            <-----------RAV1(1)   aaattgcttaattcgaatactaagatttcgtagtaattcagcatttatttgattcgatcttgcttaaattgattttgttgtctgcttcatgttttttcag  21865500  Previous    Next  AGI:  At1g59510.1    Description:  CF9. similar to ATPP2-A10 (Phloem protein 2-A10), carbohydrate binding [Arabidopsis thaliana] (TAIR:AT1G10150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77737.1); contains domain PTHR21477:SF2 (PTHR21477:SF2); contains domain PTHR21477 (PTHR21477) Range:  from: 21863260    to: 21864741    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g59520.1    Description:  CW7. similar to unnamed protein product [Vitis vinifera] (GB:CAO61501.1); contains domain PTHR21477:SF3 (PTHR21477:SF3); contains domain PTHR21477 (PTHR21477) Range:  from: 21865047    to: 21869855    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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