Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------AHL20(2)        --------->ATHB12      <-----------HVH21      <-----------TGA1     <---------ANAC55(2)                                                   <------MYB83     --------->ANAC46                                <------MYB46(1)       <------MYB46(1)     --------->ANAC55(2)<-----------GT1           <------ZmHOX2a(1)      <---------WOX13(1) --------->ARR14(2)     --------->YAB1        ---------->DOF2--------->TOE1(1)           --------->DAG2 <---------ARR14(2)  --------->YAB1     --------->ICU4       --------->TOE2(1)          ---------->DOF2 ----->YAB1      --------->AHL20(2)   <---------ICU4 <------MYB83       <---------ARR14(2)   --------   caaaatcccgtcattgaatttttttataacaacgttttagtcattactaaaaggatggtgacctagtacaaggggattggtactccttgataaagttgta  21859900                                           <---------ANAC55(2)                    -------->ATHB1         --------->ANAC55(2)                    --------->ATHB12 <---------WRKY18(1)                    <---------ICU4<-------GAMYB                    --------->YAB1<---------ANAC58                   <---------ATHB12 --------->WRKY12                   <---------YAB1 <---------ANAC58                                               <---                 --------->WOX13(1)<---------WOX13(1)                                      ------>ZmHOX2a(2)                 --------->YAB1  --------->MYB55(2)                                       <------ZmHOX2a(2)              --------->YAB1     <---------MYB46(3)  <---------ANAC58                    <---------ARR14(2)   ---------->DOF2 --------->ICU4<------MYB83  >>>>>>>>>MYB98       <-----------HVH21    --------->ARR14(2) --->GT1    <---------ARR11(3)   <------MYB46(1)     <---------ANAC58----------->HVH21   <---------ARR11(3)   aaaacaaaagaaacgatattaatcattgatatagttggttgacttaagtaacataccttgtgagaaactcggtgatgggatgagaagacaagatcggaga  21860000                                                                                           <------NtERF2                                                            <----------DOF2               ------>NtERF2             --------->ARR14(2)     <-----------ARR10<---------LBD16                      -----------             <---------ARR14(2)     --------->ARR11(3)   <---------ARR14(2)              XXXXXXXXXXXX            --------->CCA1(2)       <---------ARR14(2)   --------->ARR14(2)            ------->GAMYB<            <---------GLK1(1)       <---------ARR11(3)   <-----------ARR10            --------->ANAC46       <---------MYB52(1)           --------->ARR14(2) --------->LBD16              --------->MYB52(1)      <-------GAMYB     --------->ARR14(2)        --------->MYB46(3)            ------>ZmHOX2a(1)  --   <---------At5g28300  <---------ARR14(2)  <---------TOE2(2)                   ===================== <------ZmHOX2a(2)     <---------GLK1(1)    <---------TOE1(2)              --------->GLK1(1)       <- ------KAN4(2) <-------TEIL        <---------CCA1(2)--------->MYB52(1)     <---------GLK1(1)     <---   acgatcaccgttggatatacgttgaatatccgtcttcaaatcttcgtagattaccaccggaactttgctcttgaacgatttcctatcaacggcaccatta  21860100                     --------->LBD16                    <---------ANAC55(1)                    --------->ANAC55(2)              --------->ARR11(3)              <---------ARR14(2)              <---------GLK1(2)              --------->ARR14(2) >RAV1(1)<-----------HVH21                               <----------DOF2 XXXXXXX>MIR172B*   <---------ANAC58                    <---------DAG2            --------->LBD16 ------ZmHOX2a(2)   <---------ANAC58                  ------->TEIL               <---------ANAC46 ------->ARR11(3)   <---------ANAC46                 <---------ARR11(3)       --------->ARR14(2)    - ======HOX2a_HOX2a  <---------ANAC55(2)   <-----------ARR10                   <---------ARR14(2) <--- --------ARR11(3)--------->GLK1(2)        <---------ARR11(3)             <-----------RAV1(2) ------>ZmHOX2a(1) ------YAB1   <---------ARR11(3)          --------->ARR11(3)           <-----------HVH21    ---------   agatcgaaccgtttcagatattccgtgttcgagttacgactaagtatctctccaagaaccttttcttgaaccgagtcagggttccgagtaatctcctcaa  21860200                                        --------->ANAC58                                        --------->ANAC58                                      ---------->DOF2                                   <---------DEAR3(2)                                  <---------DEAR3(1)                                  <---------At1g77200                                 <------NtERF2                               <---------ANAC46                          <---------At4g35610                               --------->ATHB12                          --------->At4g35610                              --------->ICU4                        <-----------RAV1(2)                                <---------YAB1 ------>TEIL --------->REM1(1) --------->ETT(2)                       ------->GAMYB   <---------TOE1(2) ------ATHB12<---------ALFIN1  <---------ANAC58                      --------->MYB46(3)            -- >TOE2(3)  <-----------HVH21   <---------ANAC58                     --------->At4g35610      <-------   tgaacttgagagccttcacctctgtctcagatgtcgtcggtgaagccatcccagattgaagaagcgaatcaacagccatgatttatcgaatgtttttgtg  21860300                                                                                         --------->YAB1                                                                                      ---------->DOF2                                                                                    <---------At4g35610                                                                                 --------->TGA2(2)                                                                                <-----------HVH21                                                                                <-----------TGA1                                                            <---------HSFB2a(2)--------->ANAC46      --------->DAG2                                        --------->HSFB2a(2)--------->bZIP60(2)     ---------->DOF2                                    <-----------TBP   <---------ARR11(3) --------->ANAC58                                    <------MYB83         --------->ARR11(3) --------->ANAC58                                    <------MYB46(1)    <---------HSFB2a(1)     ----- -------->DOF2                                     <--------P     --------->ALFIN1  --------->At4g35610 --ANAC46----------->GT1                         <---------HSFB2a(1)    --------->HSFB2a(1)     -----   taaaagcaaaagtgtttaatattagcaaatgtttgatgagtagccaagagaaggttggatttatagaaggggggaagttctacgtcagcaaagataacaa  21860400                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                             <-------                                                                                             <------MYB46(1)                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           <--------P                                                             <---------GLK1(1)             <---------MYB55(1)                                                             --------->GLK1(1)            <---------ANAC58          <---------WOX13(1)                                 <---------ARR14(2)           <---------ANAC58         <------------CBF                                    --------->ARR14(2)          --------->ATHB12        --------->ATHB12                           --------->AHL20(2)                    --------->MYB55(2)       --------->AHL20(2)                      <---------AHL20(2)                        <---------MYB46(3)       <---------AHL20(2)                      --------->AHL20(2)                     <------------CBF --------->ANAC55(2)      ------------>CBF    --------->AHL20(2)                     --------->ATHB12 <---------ANAC55(2)--------->GLK1(2)        <---------AHL20(2)                     <---------YAB1 <- ---->ANAC58        <-----------ARR10    <---------AHL20(2) --------->GLK1(1)       ----------------- ---->ANAC58       <---------GLK1(2)    --------->AHL20(2)  <---------GLK1(1)------------>CBF<------MYB83   gtcaagtgtttaattggtagagaatctcaccaatatagtagatttattttaaattaagtagggaatccccattatcaaatacaattttcattggttggta  21860500 -------->ARR14(2) ---------ARR14(2) ------>TEIL ------ANAC58 ------ANAC55(2) ----->ANAC58 ------ANAC58 ----->ANAC58 ----->ANAC55(2) ---TEIL ---------->AtSPL8 --DEAR3(2) >MYB59 -MYB46(3)                                                                        <----------DOF2 >MYB111(1)                                                                 <---------ARR14(2) -------AtSPL3                                                    --------------->AGL15 -------AtSPL8                                                    <---------------AGL15 >MYB46(2)                           --------->YAB1             <-----------GT1   <---------DAG2 >MYB111(2)                         <---------ATHB12     <---------At4g35610<-----------ARR10 --------CCA1(2)           --------->DAG2             <---------MYB52(1)    --------->ARR14(2)     <- ------>TaNAC69(2)        ---------->DOF2            <-----------HVH21--------->YAB1               --   cgtatctcataaataagttgcacaaaaaaaaagtaccactgatcactgatcagaccgtcatcttatttacaaatatagtatctactttaccatggaagta  21860600                                                                                                  ---       --------->ICU4                                                                      <---------TOE2(3)     ---------->DOF2                                                                      --------->YAB1  <----------DOF2                  <----------DOF2          --------->WRKY38(1)      <---------TOE1(3) ------>ZmHOX2a(2)               --------->MYB52(2)  <-------TEIL     <---------AHL20(2)<---------WOX13(1) --------ARR11(3)              <---------MYB52(1)    <---------YAB1   <---------ICU4 <---------YAB1 ------->ARR11(3)            ----------->GT1  <---------AtLEC2>>>>>>>>>WRKY6         <---------TOE2(3)   tgatctttaaagattaatctaactatatgtctcgttactttcagttttgcatagtttcattgttgactataaatatttcacatagttaagattgatgatg  21860700                                                                                                   <-                                                                                                  ---                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(1)                                                                                  --------->AHL20(1)                                                                           ----------->GT1        <--                                                                       --------->AHL20(1)    --------                                                                       <---------AHL20(2)   <--------                                                                       <---------YAB1       ---------                                                                      --------->AHL20(2)    ---------                                                  <---------WOX13(1)  --------->YAB1       <---------ATHB12                                       <---------CCA1(2)             <---------AHL20(2)--------->AHL20(2)                                  <---------At4g35610             --------->AHL20(2)   <---------AHL20(2) <---------AHL20(2)        --------->ARR11(3)  ------>ZmHOX2a(1) <---------AHL20(2)--------->AHL20(2) --------->YAB1            --------->AHL20(1) <---------MYB59    --------->AHL20(2)<---------AHL20(2) ---->TEIL     <---------TOE2(3)  --------->At4g35610      --------->TOE2(3)     --------->AHL20(2)<-   tatttataagaaaaactaagataaaaacatatattgagctcatatattcctaattgaaaaacatcaaataaataatattgaaaattaatttaaatcatta  21860800  Previous    Next  AGI:  At1g59500.1    Description:  GH3.4; indole-3-acetic acid amido synthetase. Identical to Indole-3-acetic acid-amido synthetase GH3.4 (GH3.4) [Arabidopsis Thaliana] (GB:Q9LQ68); similar to GH3.1 [Arabidopsis thaliana] (TAIR:AT2G14960.1); similar to YDK1 (YADOKARI 1), indole-3-acetic acid amido synthetase [Arabidopsis thaliana] (TAIR:AT4G37390.1); similar to GH3.3, indole-3-acetic acid amido synthetase [Arabidopsis thaliana] (TAIR:AT2G23170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70861.1); similar to auxin and ethylene responsive GH3-like protein [Capsicum chinense] (GB:AAS02074.1); similar to Nt-gh3 deduced protein [Nicotiana tabacum] (GB:AAD32141.1 Range:  from: 21858158    to: 21860279    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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