Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->YAB1                                 ----------->HVH21                             --------->MYB46(3)                           --------->ARR14(2)                                                    ----                           <---------ARR14(2)                                                    ----                         --------->LBD16                                                         ----                        --------->ANAC46                                                    ---------                       <---------LBD16                      ------>ZmHOX2a(1)             <---------ANAC55(2)      --------->LBD16 --------->MYB52(1)           --------->YAB1                      <---------ZAT18     --------->ANAC46<---------ALFIN1           --------->YAB1        --------->At4g35610 --------->ANAC55(2) ----->TOE2(3)      ----------->HVH21  <---------ANAC58    --------------->AGL15  ------>ZmHOX2a(1) ----->YAB1         ------>ZmHOX2a(1)  <---------ANAC58   <-----------------AGL1 --------->TOE2(3)   cttattcccccaataacctctcctcaccggaaccactgatagcttagcaagaataatagctcctctaatggcagtagcaacttccttagaacacttgaca  21847000       <---------ICU4                                          --------->At4g35610      ------>MYB46(1)                                          <---------ZAT2      ------>MYB83                                             --------->ZAT2      -------->P                                         --------->WRKY38(1)     ----------->RAV1(1)           ---------->DOF2       --------->WRKY12   --------->MYB46(3)           ----------->RAV1(1)      --------->WRKY45                      ------ ----->ANAC46               --------->MYB46(3)           ----------->HVH21                  ========= ----->ANAC58              ------>MYB46(1)             ------>ZmHOX2a(1)                    ------>ZmHOX2a(2) ----->ANAC58              ------>MYB83                <----------DOF2  --------->MYB52(2)<---------ARR11(3) -->HVH21                 ----------->RAV1(1) ------->TEIL<---------WRKY18(1)             --------->ARR11(3)   cccaaaccaacatgaccatttccatcaccaacaacaacaaaggccttgaatctagtcctttgaccagctctggtttgtttctgaacaggcatgatcttca  21847100                                                                              --------->At4g35610                                          <------MYB46(1)                   ------>ZmHOX2a(2)                                          <------MYB83                     --------->CCA1(2)                       ------>MYB46(1)   --------->MYB59                   <------ZmHOX2a(2)                       ------>MYB83      --------------->AtSPL8           <---------ARR11(3)                       -------->P------>ZmHOX2a(2)                        --------->AGP1                  ======================HOX2a_HOX2a                       <---------ARR14(2)   ------                  <------ZmHOX2a(1)  --------->ATHB12                     --------->ARR14(2)   ------              --------->TOE1(2)--------->ARR11(3)                         --------->ARR11(3)   <-----       <----------DOF2----------->RAV1(1)<---------------AtSPL8           <---------AGP1       <----- --->YAB1     --------->TOE2(2)<---------ARR11(3)                       ----------->ARR10 <---------MYB52(1) ========================HOX2a_HOX2a<---------YAB1<----------DOF2   <---------YAB1     <-------TEIL <   taacctcgtctttcaacgtaggaccaacaagatgatctatgatttggtactcctttactgggagagaatgaagatagatctgctctagcttcgttatttt  21847200                                                                            --------->ANAC58                                                                   --------->bZIP60(2)                                                                   --------->ANAC46                                                                   --------->TGA1a                                                                   --------->ANAC58                                                                   --------->ANAC58     --------->MYB46(3)                                    --------->DEAR3(1)    <---------At4g35610                                <---------SPL7       --------->ANAC58   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)               --------->ANAC46       --------->ANAC46   --------->ANAC46                                 --------->LBD16--------->O2 --->AHL20(1)            <-----------HVH21     <---------ANAC58    <---------O2 --->AHL20(2)           <------MYB83           <---------ANAC58  <---------ALFIN1 ----AHL20(1)           <------MYB46(1)     <---------MYB52(1)--------->RAP2.6(2)                  <- ----AHL20(2)   <-----------------AGL1    <---------ANAC58--------->ANAC58 <---------LBD16    <------ZmHOX2a(2) -----------HVH21      --------->MYB59    <---------ANAC58--------->ANAC58<---------ALFIN1   <-------   attgtcagccactagacgacctagtttggtcactggaacccatttcgtttcttccgaggcacggcctccacgtcttccacggcctcttggaccacgatca  21847300                                                                      --------->DEAR3(1)                                                                      --------->RAP2.3(2)                                                                      --------->RRTF1(3)                                                                     --------->DEAR4(2)                                                                     --------->RAP2.3(1)                                                                     --------->ORA47(2)                                                                     --------->ATERF1(1)                                                                    ------>NtERF2                                                                    <---------ATERF1(1)                                                                    <---------RRTF1(1)                                                            <---------ALFIN1                                  ------>NtERF2             --------->ANAC58                         --------->DEAR3(1)                 --------->ANAC58                       --------->ABI4(1)                   ------>NtERF2                      --------->DREB2C(2)                 --------->DEAR3(1)                <-------PIF5     --------->ANAC46         <---------ALFIN1               --------->ANAC46  --------->ANAC58       --------->ABI4(1)             <---------ALFIN1    --------->ANAC58       ------>NtERF2<------NtERF2        ------>NtERF2 --------->DEAR3(1)               --------->DREB2C(2)        <---------ATERF1(1) <---------ARR14(2)         --------->DEAR3(1)       <---------ALFIN1------>NtERF2                   --------->ANAC46       --------->RAP2.6(2)  --------->ARR14(2)        --------->MYB46(3)   --------->ANAC58   ------->GAMYB                  <---------At5g28300 <---------DAG2   --------->ANAC58  --------->MYB46(3)              <---------ATERF1(1) <----------DOF2  --------->LBD16  --------->ATERF1(1)--------->DEAR3(2)             <---------WRKY12<---------RAP2.3(1)   ------>NtERF2 <---------ATERF1(1)<---------ATERF1(1)             <---------WRKY38(1)------>NtERF2     --------->ANAC46 <---------ALFIN1  <---------ALFIN1               <-----------HVH21<---------DEAR3(1)<----------DOF2 ----------HVH21------->PIF5<-----------ARR10<---------REM1(2)     --------->ANAC46------>ZmHOX2a(1) ----HVH21--------->AtMYB61 <---------ARR11(1)<---------ALFIN1  ---------->CDC5 ------>ZmHOX2a(1)   cggccacggccacctccacgtccaccgccgaatccacgcccgaagtcaccacggtcaccgccacgctctgcgccgctttctcctcctctttccgccattt  21847400                                                                                           <---------PCF2                                                                                          -----------                      <-----------GT1                                                 --------->ALFIN1                   --------->ARR14(2)                                                <----------DOF2                   <---------ARR14(2)                                               <---------ANAC58             <---------STY1(1)      --------->AHL20(2)    <---------TOE1(3)         <---------ANAC58          *TSS--------->MYB52(1)    <-----------TBP       <---------TOE2(3)   --------->ATHB12<------NtERF2   tcgatgaagtaaaccctagcggattcacaagttttagtttatataggtgagcataagattagggttttcgaaagtctgaattatgggcttgtgggccgaa  21847500                                                                                <---------ANAC55(2)                                                                                <---------ANAC58                                                                                --------->ANAC55(2)                                                                           <---------------AtSPL3                                                                           <---------------AtSPL8                                                                     --------------->AGL15                                                                     <---------------AGL15                                                                     --------->MYB46(3)         <----                                                                     ================================                                        ------>NtERF2               --------->ANAC46            <----       <------------CBF         ---------->DOF2                     --------->ANAC58   --------->AtLEC2     <---------YAB1       --------->ANAC46     --------->AHL20(2)   --------->ANAC58 --------->CCA1(2)     <---------AHL20(2)<-------TEIL  <---------LBD16                ----------------->AGL2     ------ >TCP11(1)            --------->CCA1(2)<---------ATERF1(1)         ------->GAMYB<---------ANAC58<----   tgttgatataattgttttgttgagatacaaaccaagaagcccggcccaataacataacttattcaataacacccaatatagtacgtgatatgcaaattga  21847600                                                                                           <---------AtLEC2           <---------ANAC58                                                                <---------ANAC58       <----------DOF2                                                                     <---------ANAC58      <---------ANAC58  ------>ZmHOX2a(2)                                   <---------ANAC58      <---------ANAC58--------->ARR11(3)            --------------->AGL15   <---------ANAC46 -----ANAC58          <---------ARR11(3)         <-----------GT1   --------->AtLEC2        <---------ANAC46 ===================================================================MADS_MADS  <---------ZAT14 -----ANAC46  --------->ARR11(3)       <---------ANAC58        <----------DOF2 --------->ZAT18    --- --->ATHB12<---------ANAC58            <---------ANAC58        <---------DAG2  <---------ZAT18  <---- -----ANAC58 <---------CCA1(2)        <-------TEIL  <---------------AGL15   <---------ANAC58    <----   gtggaattgctttgcttatcttgtgatcttaagaactatgtgcgtattgttttactatttagagactttatgcaaattgagtgcaattggtttgcttgtc  21847700                                                            ------>ZmHOX2a(2)                 <------                                                            ----------->GT1                  --------                                                           <------ZmHOX2a(2)                 --------                                                          --------->ARR11(3)               --------->YAB1                      <---------MYB46(3)                  <---------ARR11(3)      <-------GAMYB        <---------GLK1(2)                       --------->ZAT18                  --------->MYB55(2) -------->GT1    <---------ARR11(3)             <---------ZAT18                  <---------MYB46(3) -----ANAC58   --------->ANAC58                 --------->ZAT14                  --------->MYB52(2) -----ANAC58   --------->ANAC58    --------->AtLEC2   ---------->DOF2          <---------MYB52(1)   <   ttgtgaaacaaattctcaagacatttgttagacatttatgcaaaccattgtgaactcaaagatcgtaaacaaatgtaattcgtttgttgtcagtaataaa  21847800                       <---------YAB1                    ------->TEIL ---AHL20(2)   --------->At4g35610                  --------->HSFB2a(1)                           <-- ->ICU4        <---------At4g35610                  <---------HSFB2a(1)<-----------HVH21      <------ ->AHL20(2) ---------->DOF2       --------->At4g35610          <----------DOF2      <---------------- -----------HVH21  <---------GLK1(2)              <---------GLK1(2)   <-----------RAV1(1)   ---------   taggtcatacattttaaagctgaatctcattgtatcatctctcaaatggctagaattttcttcggctttttagtgtcgcatcattctcttatttaggcca  21847900  Previous    Next  AGI:  At1g59359.1    Description:  40S ribosomal protein S2 (RPS2B). Identical to 40S ribosomal protein S2-2 (RPS2B) [Arabidopsis Thaliana] (GB:Q93VB8;GB:Q8L861;GB:Q9SM06); similar to 40S ribosomal protein S2, putative [Arabidopsis thaliana] (TAIR:AT1G58684.1); similar to XW6, structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G58380.1); similar to 40S ribosomal protein S2, putative [Arabidopsis thaliana] (TAIR:AT1G58983.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23572.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79008.1); contains InterPro domain Ribosomal protein S5, eukaryotic/archaeal; (InterPro:IPR005711); contains InterP Range:  from: 21845969    to: 21847410    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version