Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ANAC46                                                                  ----------->GT1   --------->ANAC58                ----------->GT1 ---------->DOF2         ----------->HVH21           --------->ANAC58 >MYB59    ---------->DOF2  ---------->DOF2          <---------MYB46(3)<---------ANAC46           ---   gcacgatgactccaaaaggagtttattgtttaaagaaagacgaaaacatggagagttgttgacgcagagagttacttagatgcttcacccaagaagagtc  21843100                                                                   <-------TEIL                                                               <---------YAB1                                  --------->DEAR3(1)     <------NtERF2                      <--------              <---------CCA1(2)   <---------ETT(2)      ------>NtERF2                      --------->TOE2(3)        ---------->DOF2           <---------DEAR3(1)  ---------->ID1       <--------P   ---------->ID1  --------->AHL20(2)       ------>ZmHOX2a(1)    --------->ARR11(3)--------->CCA1(2)    <-----------GT1 --->ZmHOX2a(1)           --------->TOE2(3)<------ZmHOX2a(1)   <---------TOE2(3)    <---------AHL20(2)   ctcataaaatcaaagcatctctcttcttcctaaacgtcgacgagaggagagttcttggcgccattaagattcagaaggttagtcatttttttcccttaat  21843200                                           <---------ANAC58                                           --------->TGA1a                                           <---------ANAC46                                           <---------ANAC58                                  <---------YAB1                                  --------->ICU4                                --------->YAB1                               <---------ZAT6                              <---------WOX13(1)    <---------At4g35610                             <---------ANAC58       --------->At4g35610           <----------DOF2   <---------ANAC58--------->ALFIN1             --------->TOE2(3)      <-------MYC2       <------------CBF  --------->O2             <---------ARR14(2)      <-------MYC3   --------->At5g28300   <---------O2             --------->ARR14(2)      ------->MYC3  ----------->GT1        <---------TGA1a   <---------ZAT18   --------->TOE1(3)      ------->MYC2<---------At5g28300      <---------ANAC55(2)      <---------ARR11(3) -MYB52(1) ==========================================bZIP_DOF--------->ZAT18  --------->At4g35610<---   tcttagcatgtgtctttgtttacggtgaattgagtgataatggggacgtgaggcatctcatagttcacaagttctgccttagcttaaccatgcctgacta  21843300                                                                        <---------MYB59                                                                  <---------AHL20(2)          <---------ARR11(3)        <---------ANAC58          ----------->GT1          --------->ARR11(3)    --------->GLK1(1)          --------->GLK1(2)      ---------->DOF2      --------->ANAC46               <---------GLK1(2)          <-----------TBP  <-----------GT1        <-----------GT1                  --------->ARR11(3)--------->ZAT6 ------YAB1          ----------->TBP<---------ANAC58    ----------->ARR10------>ZmHOX2a(1)      <----   ctattaactaaagttcttcaactatatataccacatttccttgaactgcaagtctagtaagattctgttaaattcctaacactatagatttatagttttt  21843400                                                             --------->AHL20(2)                                                           <---------YAB1                                                           --------->ICU4                                                         <---------ICU4                                                         --------->YAB1                <---------HSFB2a(2)                                         <------------CBF<--------HAHB4                --------->HSFB2a(2)                                     <---------ZAT6     <---------ATHB12        <------------CBF                               <----------DOF2     --------->TOE2(3)       <---------STY1(2)  ------>NtERF2           <---------HSFC1(2)     <---------ARR11(3)        --------->STY1(2) -------GT1<-----------GT1--------->HSFC1(2)------------>CBF <-----------TBP  <-------TEIL   tcgatgccatttgtaactacatagcagtagcttctttttgtgttattgcaatttcttaatcatttttatatcgaactagctacattgttttagaaatcga  21843500                     --------->ATHB12                    <---------YAB1            <---------ANAC58            <---------ANAC46            <---------ANAC58                                               --------->ZAT14           <---------ZAT2                   <---------TOE2(3)              <---------ZAT14           <---------STY1(2)               <-----------GT1                 --------->REM1(2)           --------->STY1(2) --------->ATHB12--------->ANAC55(2)           <---------ZAT18          ------>MYB83    <------MYB83  --------->ARR11(3)          --------->At4g35610          ------>MYB46(1) <------MYB46(1)--------->CCA1(2)        --------->YAB1        <---------MYB59  --------->MYB59<---------ARR11(3)        <---------ICU4         ----------->GT1   agtttgtttacctagcttgtttatgatttggtcattgctcaagatttacgttttgatgctatgtacaatcagcactgtgtacaatacgttcttgttaata  21843600               <---------ANAC46             <-------GAMYB            --------->ALFIN1          <------MYB83 <---------At4g35610          <---------ANAC58          <------MYB46(1)          <---------ANAC46                                      <------MYB46(1)          <---------ANAC58                                    <---------WOX13(1)               <-----         <---------MYB46(3)                                 --------->ATHB12                   <-----         --------->MYB55(2)                              <---------At4g35610                  -------     <---------MYB46(3)--------->At4g35610               <-------GAMYB                ----------->GT1  <-----------RAV1(1)<-----------RAV1(2)              <-------TEIL                    <---------MYB46(3)  ===============================RAV            ---------->DOF2 <------MYB83      <------ZmHOX2a(1)   gtttgtgttgttgggtgttgtgttcagatggaagagattgtttttgaaacaaaagatgcagttgattggtcatatagaagcgaaggagttgttaatttgg  21843700                              <---------MYB52(1)                             --------->TOE2(3)                      <---------ALFIN1                 --------->At4g35610                                                                -                 <---------At4g35610                                 --------->AHL20(1)        <----- -MYB46(1)    <------ZmHOX2a(2)        <---------CCA1(2)             <---------AHL20(1)      -------- -MYB83      <---------ARR11(3) --------->MYB52(2)     ---------->DOF2  <---------AHL20(2) <--------P -->MYB59<---------LBD16 <----------DOF2   <----------DOF2        --------->AHL20(2)      <-------GAMYB   ttctcgcttactctggatcatctcccactttcgttagtctcatctctttctcaatcccaaagatgagattatatattatttctagtttttggggttagga  21843800                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC46                                                                                  <---------ICU4                                                                                 --------->AHL20(1)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                          <---------LBD16                 <------ZmHOX2a(1)                                         <---------ANAC46                ----------->GT1              <---------ANAC58        <----------DOF2                   <---------TOE2(3)   --------- ---------->GT1<---------WOX13(1)   --------------->AGL15             --------->ICU4 <-----------GT1 -ZmHOX2a(1)  <---------ANAC58    ---------->ID1                --------->DAG2  --------->AHL20(2) ->MYB59     --------->ATHB12    <-----------GT1              ---------->DOF2   <---------AHL20(2)<--   agaagtatataacattgattgcaatcttgtttgtttttctcttttgtggaatatgtgaagttgggaaaggtgatgaggataaaaaaattacgaaacacta  21843900                                                                                  ----------------->AGL1                                                                                  ----------------->AG                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                            ------->TEIL                                                                            --------->ARR11(3)                                                                           <---------CCA1(2)                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                                     <---------ARR11(3)                                                                     <---------ARR14(2)                                                                     --------->ARR11(3)                                           ---------->DOF2           --------->GLK1(2)                                         <------ZmHOX2a(1)           --------->ARR14(3)                                         =====================================HOX2a_HOX2a                                         ====================================HOX2a_HOX2a                                       --------->LBD16               <---------ARR14(3)             -  --------->YAB1                      <---------LBD16               <------ZmHOX2a(1)               < ----------->GT1                --------->SPL7                    <---------TOE1(3)--------------->AGL15 >ZAT6                        <---------SPL7          <---------LBD16--------->ARR14(2)         ----- ----ZmHOX2a(1)    --------->ALFIN1   <-----------RAV1(2)         <---------TOE2(3)<---------------AGL15   ggaatgaaaatagagaccgaagtggaagttgtcttacgacccaggaaaagcttatttggggagagattaaggatcttgtatcttgccaaaacaaggagat  21844000  Previous    Next  AGI:  At1g59312.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58936.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58643.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61115.1); contains InterPro domain Protein of unknown function DUF941 (InterPro:IPR009286) Range:  from: 21843523    to: 21845637    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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