Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------YAB1                                --------->YAB1                             <---------ICU4                             --------->ATHB51                          --------->YAB1                  <---------AHL20(2)               <-----------GT1                                  -                 --------->AHL20(2)             <---------ICU4              <---------bZIP60(1)     -                 <---------AHL20(2)   <---------AHL20(2)                    --------->bZIP60(1)  <---         --------->At4g35610--------->ICU4  <-----------GT1            <---------ICU4       <--------         <---------At4g35610<---------YAB1 --------->AHL20(2)    <-----------GT1      <---------YAB1-   ctacaattttgagatgaaattttttttagcataattgtaattcatttaactaattacaaaatcaaattttcaattttgacatcatattatgttttagatt  21831300                       <--------ATHB1                       <---------AHL20(1)                       --------->YAB1                       <---------ICU4                       --------->ATHB51          <---------ZAT14                                                                          --          <---------ZAT18                                                     <-----------GT1      <-          --------->ZAT14   <-----------GT1                                  <-----------GT1      <--  --------->At5g28300  --------->AHL20(2)                                  --------->YAB1      ------ -------->ANAC58      --------->ICU4                                    --------->ATHB51    <-------- -------->ANAC46      <---------ATHB51                               --------->YAB1         <-------- ------REM1(2)        <---------ATHB12                               --------->TOE2(3)    --------->AHL20(2) -TOE2(3) --------->ZAT18  <-----------GT1      <-----------GT1   <-----------GT1   ------>ZmHOX2a(1) -------->ANAC58    --------->YAB1  <-----------GT1    <----------DOF2  <---------ICU4 --------->WOX13(1)   acacggtaatagttcactactacaataattttccaattttacaagaattttttccatctttattttttataccataattttaactccttcaattaagtat  21831400                                                          <---------ANAC46                                                          <---------DEAR3(1)                                                         --------->ALFIN1                                                         <------NtERF2                                                        <-----------HVH21                                                       ========================================bZIP_DOF                                                      ------->MYC3                                                     <---------TGA1a                                          <---------AHL20(1)                                         --------->AHL20(2)                                    --------->AHL20(2)<-------MYC3                                <---------AHL20(2)   --------->O2                                --------->AHL20(2)   --------->ANAC58                                <---------AHL20(1)   --------->ANAC46                    <---------AHL20(2)<---------YAB1 --------->TGA1a       --------->AHL20(2)       --------->AHL20(1)   <---------O2       <---------AHL20(2)   <---------AHL20(2)       ==========================================bZIP_DOF   --------->AHL20(1)      <---------AHL20(1)        --------->ANAC58   <---------AHL20(2)      --------->AHL20(1)  <-----------GT1                                   <---   --------->AHL20(2)   <---------AHL20(2)--------->AHL20(2)                                     ----   <---------AHL20(1)   --------->AHL20(2)<---------AHL20(2)<------NtERF2                   <-------- ------->AHL20(2)  <---------ARR11(3)<---------AHL20(1)----------->HVH21   --------->ANAC58 --------- --------AHL20(2)  --------->ARR11(3)<---------AHL20(2)--------->O2        ----------->GT1  <-------- -------AHL20(2)   <---------AHL20(1)--------->AHL20(1)<---------TGA1a     <---------ANAC55(2) <----- --->AHL20(1)      --------->AHL20(1)--------->AHL20(2)--------->TGA1a     --------->ANAC58 --------- -TOE2(3)         --------->CCA1(2) --------->YAB1   <---------ALFIN1    <------ZmHOX2a(1) --------->YAB1 -ANAC55(2)      <---------ARR11(3)<---------YAB1  <---------ALFIN1--------->YAB1   <----------DOF2--   attaattaattaaaaactagatatatttatatattttattatattaaatttacccacgcgtcggggctaacatgaggacgtaaactctttgtattatatt  21831500                                                               <----------DOF2    ----------->GT1                                       <----------DOF2 ------ARR11(3)                                    --------->HSFC1(1) ----->ARR11(3)                                    <---------HSFC1(1) -AHL20(1)              <---------AHL20(2)         --------->HSFB2a(2) >AHL20(1)             <---------AHL20(2)          <---------HSFB2a(2) -AHL20(2)       <----------DOF2                ------>ZmHOX2a(1)                      <---------WRKY18(1) ----AHL20(2)   <---------DAG2               <---------------AGL15                    --------->WRKY45 >AHL20(2) --------->YAB1                    --------------->AGL15 <-----------GT1    --------->WRKY12 ------->YAB1<-----------GT1                <-----------GT1   --------->TOE2(3)       --------->WRKY38(1)   atcttgatgtaaataataccttttttttatttgtcaatactctgtttctccttctagaaactttcctttatactgtttgtgtattttgttgaccacaaaa  21831600                                     --------->CCA1(2)                                    --------->ARR14(2)                                    <---------ARR14(2)            <-----------HVH21                                  <---------MYB46(3)         --------->GLK1(1)                               <---------ANAC46      <----------DOF2                             <---------------------WRI1      <---------GLK1(1)                   <---------YAB1 ----------->GT1    ------>ZmHOX2a(1)    <------ZmHOX2a(1)        <-          --------->ZAT6 <------ZmHOX2a(1)        ---------->ID1 --------->WOX13(1)       xxxxxxxxxxx    <------ZmHOX2a(1) --------->CCA1(2) ---------->DOF2   <---------TOE2(3)--------->ALFIN1       *TSS   actcgaggactaagactaagtaagataggaaatgggtggatacaaagaagttgtccttttaagaaatccatcacgaggagttggaaagtctgaaccagag  21831700                                                                                    <---------ANAC46        <---------ANAC58                                                            <---------ANAC58        <---------ANAC58                                                            <---------ANAC58     <---------ZAT18                                                             --------->GLK1(2)  <---------ANAC58                                                     <---------ANAC58  <---------ANAC58                                         <---------CCA1(2)   --------->HSFB2a(1)  <---------ANAC46  <----------ID1                       --------->YAB1<---------ANAC58    --------->MYB46(3) ---------DOF2 ---------->DOF2                          <---------ATHB12       <---------HSFB2a(1) xxxxxxxxxxx>smallRNA(le3)   <------ZmHOX2a(1)        --------->WOX13(1)     <------ZmHOX2a(1)   actttcgtgtgcttatccaaagacgacgagaggagtcccaagaagtctagcggtatcaatcaaatctcttcttacttgaggagattccttggaaccatca  21831800                                              --------->ARR11(3)                                              <---------ARR11(3)                                             --------->GLK1(1)                                             <---------RVE1(1)                                             <---------GLK1(1)                                             --------->RVE1(1)                                             <---------CCA1(1)           --------->HSFB2a(2)                                             --------->CCA1(1)           <---------HSFB2a(2)                                            --------->ARR11(3)          <---------ANAC46            -                                     --------->At5g28300          <---------ARR11(3)                <                                  <---------At5g28300             --------->ARR11(3)           ------  <--------P               <----------DOF2  <---------ARR11(3)   <---------CCA1(2) ----------->GT1 <-   agaggttagtccattttcttagcaaatttctttgtttacggtgaaagatatctctatttgtttctctaaatctttcgagtagtaacagttaaactttgtc  21831900                                                                                   --------->YAB1                                                                                   -------->HAHB4                                                               --------->ATHB12   <---------YAB1                                                  <---------AHL20(2)             <---------TOE2(3)    --------->LBD16                              --------->AHL20(1)             --------->YAB1    <--    ------>ZmHOX2a(1)                            <---------AHL20(1)           <---------YAB1    -----   <---------LBD16                               <---------AHL20(2)        <---------YAB1      <----- -------->ARR14(2)                               --------->AHL20(2)      --------->ZAT6       <------ ---------ARR14(2)                               <---------ARR11(3)  <---------ARR11(3)       ------- ---->ID1      <---------TOE2(2)                 --------->ARR11(3)  --------->ARR11(3)    <XXXXXXXXX --------CCA1(2)  --------->ALFIN1    ---------->DOF2  <-----------GT1<---------GLK1(1)   <---------AtLEC2   catatcctggatagacctaggtgtgtcaagactcaagagacaaagcttgaatatatttttctaactgattagatatcactattaatgataatgcatgatc  21832000                                                                                         --------->ANAC46                                                                                   <------MYB46(1)       <---------ANAC58                                                            <---------ANAC46       <---------ANAC58                                                            <------MYB83       <---------ANAC46                                          <---------LBD16  --------->MYB46(2) -------YAB1      <-------TEIL                                 <---------ANAC58   --------->MYB59 ---->YAB1  <---------ANAC46                                   <---------ANAC46  <---------MYB55(1) ----YAB1 <---------TOE1(2)                                    <---------ANAC58 <---------MYB52(1) ---ARR11(3)<---------ANAC58                                <---------YAB1    <---------ANAC58 -->ARR11(3)<---------ANAC58                              <---------ICU4      <---------ANAC46 XXXXXXXXXXXMIR172E--------->YAB1<-----------GT1   <------ZmHOX2a(1)          <---------ANAC58   atcaatatttcgtagcttgattcatattttcatatatactacttacttaagcaggaagcattatggctggggaacttatttcgtttggtatacaaaacct  21832100                                                       --------->ZAT14                                                   --------->MYB52(1)                                                --------->ANAC58      ------>MYB83                              --------->ANAC55(2)   ------>ZmHOX2a(2)             <      ------>MYB46(1)                        <------ZmHOX2a(2)       <------ZmHOX2a(2)        -------   --------->HSFB2a(1)                      --------->ARR11(3) --------->DAG2               ---------   <---------HSFB2a(1)          <---------LBD16 --------->ANAC58    --------->ARR11(3)      <--------   --------->HSFC1(2)          <---------LBD16  <---------ANAC55(2) <---------ARR11(3) <----------DOF2   <---------HSFC1(2)<---------ANAC58       <---------ARR11(3)---------->DOF2       --------->ARR11(3) <---------ARR14(2)  <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         <---------ARR11(3)   gtggaacctactgagtcaagaatgcgagctatttcagggagtcgaagatcaagtaactgaactaaaaagggatctaaacttgttaagctcttttctgaaa  21832200  Previous    Next  AGI:  At1g59218.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein RDL6/RF9 (RF9) [Arabidopsis Thaliana] (GB:Q94HW3;GB:Q94HW8;GB:Q9SLU7;GB:Q9SLU8); similar to ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G58848.2); similar to ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G58848.1); similar to disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative [Arabidopsis thaliana] (TAIR:AT1G58807.1); similar to LOV1-like protein [Olimarabidopsis cabulica] (GB:ABW24171.1); similar to LOV1-like protein [Olimarabidopsis pumila] (GB:ABW24172.1); contains InterPr Range:  from: 21831698    to: 21836373    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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