Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------YAB1                               --------->AHL20(2)                               <---------AHL20(2)                               --------->AHL20(1)                           <---------YAB1                               <---------AHL20(1)                         --------->YAB1                             <---------YAB1                            <---------ICU4                          <---------AHL20(1)                           --------->ATHB51            <---------ARR11(3)--------->AHL20(2)                    --------->YAB1            --------->ARR11(3)--------->YAB1                <---------AHL20(2)               <-------   <---------YAB1         --------->AHL20(1)               --------->AHL20(2)             <---------ICU4 -------->GT1             --------->AHL20(2)               <---------AHL20(2)   <---------AHL20(2) ------TOE2(3)            <---------AHL20(2)       --------->At4g35610--------->ICU4  <-----------GT1 ------TOE1(3)      --------->YAB1                 <---------At4g35610<---------YAB1 --------->AHL20(2)   aggttattcatggagattttagtcatattttattatattaaactacaattttgagatgaaattttttttagcataattgtaattcatttaactaattaca  21795000                                                                 <---------ICU4                                                                 --------->ATHB51                                                                 --------->AHL20(2)                                                                 <--------ATHB1                                                                 --------->YAB1                                                    --------->ZAT14                                                    <---------ZAT14                                                    <---------ZAT18   <-----------GT1                                            --------->At5g28300  <---------AHL20(1)                                          --------->ANAC58      <---------ATHB51                  --------->bZIP60(1)     --------->ANAC58      --------->ICU4                  <---------bZIP60(1)  <---------REM1(2)        <---------ATHB12       <-----------GT1            <---------TOE2(3) --------->ZAT18  <-----------GT1      <---------- ----GT1     <---------ICU4 <---------YAB1--------->ANAC46    --------->YAB1  <-----------GT1    <---   aaatcaaattttcaattttgacatcatattatgttttagattacacggtaatagttcactactacaataattttccaattttacaagaattttttccatc  21795100                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                              --------->AHL20(2)-----                                                                          --------->AHL20(1)   ======                                                                          <---------AHL20(2)   ------                                                                          <---------AHL20(1)   <-----                                                 --------->AHL20(2)       --------->AHL20(2)   ------                                             <---------AHL20(1)       <---------AHL20(2)       <-----                                             --------->AHL20(2)      <---------AHL20(1)        ------                                             --------->AHL20(1)   <---------AHL20(2)--------->AHL20(2)                                         <---------AHL20(2)   <---------AHL20(2)<---------YAB1 ------                    <-----------GT1      --------->AHL20(2)  <---------AHL20(1)--------->AHL20(2)<---                   <-----------GT1      <---------AHL20(2)   --------->ARR11(3)<---------AHL20(1)----                 --------->YAB1      --------->AHL20(1)      <---------ARR11(3)--------->AHL20(1)----              <---------ICU4      <---------TOE2(3)          --------->AHL20(1)<---------AHL20(2)====           --------->YAB1         <---------ANAC55(2)       --------->CCA1(2) --------->YAB1   ------           --------->TOE2(3) --------->WOX13(1)  <---------AHL20(2)  --------->AHL20(1)  <-----------GT1 -GT1   <-----------GT1   ------>ZmHOX2a(1)  <---------AHL20(2)   --------->AHL20(2)<---------AHL20(1) -------DOF2  --------->ATHB51  --------->AHL20(2)         <---------ARR11(3)<---------YAB1  <-------   tttattttttataccataattttaactccttcaattaagtatattaattaattaaaaactagatatatttatatattttattatattaaatttacccacg  21795200  <------NtERF2 ---------ANAC46 ---------DEAR3(1) -----NtERF2 ------->ALFIN1 ---------HVH21 ------->HVH21 ---MYC3 ----O2 -->MYC3 ====================================bZIP_DOF --->TGA1a ----ALFIN1 --->O2                                --------->ARR11(3) ----TGA1a                             <---------ARR11(3)                                           < --->ANAC58                       <---------AHL20(2)                                         <------- --->ANAC46      --------->ANAC58 <---------AHL20(1)                                         -------- ------TGA1a     --------->ANAC58 --------->AHL20(2)              <---------AHL20(2)         -------- ----->TGA1a     ----------->GT1  --------->AHL20(1)       <----------DOF2                   <------- ----->O2        <---------ANAC55(2) <---------AHL20(2)   <---------DAG2                  ------>ZmHOX2a(1) ====================================bZIP_DOF ----------->GT1    <---------AHL20(2)    <------------- --->ANAC58    <------ZmHOX2a(1) --------->YAB1      --------->YAB1                    -------------- --ALFIN1--------->YAB1   <----------DOF2--------->YAB1<-----------GT1                <-----------GT1   cgtcggggctaacatgaggacgtaaactctttgtattatattatcttgatgtaaataataccttttttttatttgtcaatactctgtttctccttctaga  21795300     <----------DOF2                                                           --------->CCA1(2)    --------->TOE2(3)                                                         --------->ARR14(2) ----------DOF2                                                               <---------ARR14(2) --HSFB2a(2)                                                                ----------->GT1 ->HSFC1(1)                                                              <---------ANAC46      ------ ->HSFB2a(2)                 <---------WRKY18(1)                       <---------------------WRI1 --HSFC1(1)                 --------->WRKY45                 <---------YAB1 <---------MYB46(3) <----- --AGL15                    --------->WRKY12  <------ZmHOX2a(1) --------->CCA1(2) ---------->DOF2   < ->AGL15 <-----------GT1    --------->WRKY38(1)     --------->ZAT6 <------ZmHOX2a(1)        ---------   aactttcctttatactgtttgtgtattttgttgaccacaaaaactcgaggactaagactaagtaagataggaaatgggtggatacaaagaagttgtcctt  21795400                                                  <---------ANAC58                                                  <---------ANAC58        <-----------HVH21                       *TSS   --------->GLK1(1)                           <---------ZAT18   <---------GLK1(1)                        <---------ANAC58 >ZmHOX2a(1)                                <---------ANAC58 -----DOF2      <------ZmHOX2a(1)           <---------ANAC46  <----------ID1                       -- ---------TOE2(3)--------->ALFIN1        <----------DOF2 ---------->DOF2                          <-- ->ID1 --------->WOX13(1)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <------ZmHOX2a(1)        -----   ttaagaaatccatcacgaggagttggaaagtctgaaccagagactttcgtgtgcttatccaaagacgacgagaggagtcccaagaagtctagcggtatca  21795500                                                                                        --------->ARR11(3)                                                                                        <---------ARR11(3)                                                                                       --------->GLK1(1)                                                                                       <---------CCA1(1)                                 --------->MYB46(3)                                    <---------GLK1(1)                          <---------ANAC58                                             <---------RVE1(1)                          <---------ANAC58                                             --------->RVE1(1)                          <---------ANAC46                                             --------->CCA1(1) <---------CCA1(2)     --------->GLK1(2)                                              --------->ARR11(3) ------->YAB1        <---------HSFB2a(1)                                       --------->At5g28300 -------ATHB12       --------->HSFB2a(1)                                    <---------At5g28300 ---->WOX13(1)     <------ZmHOX2a(1)        <--------P               <----------DOF2  <---------ARR11(3)   atcaaatctcttcttactagaggagattccttggaaccatcaagaggttagtccattttcttagcaaatttctttgtttacggtgaaagatatctctatt  21795600                                                                                            <--------                                              --------->LBD16                              <---------ARR11(3)               --------->HSFB2a(2)            ------>ZmHOX2a(1)                            <---------AHL20(2)               <---------HSFB2a(2)           <---------LBD16                               --------->AHL20(1)              <---------ANAC46            <---------ARR14(2)                               --------->ARR11(3)        <---------ARR11(3)                --------->ARR14(2)                               --------->AHL20(2)        --------->ARR11(3)           ---------->ID1      <---------TOE2(2)                 <---------AHL20(1)       <---------CCA1(2) ----------->GT1 <---------CCA1(2)  --------->ALFIN1    ---------->DOF2  <---   tgtttctctaaatctttcgagtagtaacagttaaactttgtccatatcctggatagacctaggtgtgtcaagactcaagagacaaagcttgaatatattt  21795700                         --------->YAB1                         -------->HAHB4                        <---------YAB1           <---------ANAC58                       <---------TOE2(3)         <---------ANAC58                    <---------YAB1      <---------YAB1      <-------TEIL                 <---------YAB1       --------->YAB1  <---------ANAC46               --------->ZAT6        <---------YAB1 <---------TOE1(2)           --------->ARR11(3)       --------->ARR11(3)<---------ANAC58     --------->ATHB12 --------->YAB1<---------ARR11(3)<---------ANAC58 -AHL20(2) <---------ARR11(3)    <XXXXXXXXXXXXXXXXXXXXMIR172E--------->YAB1                         < --------GT1<---------GLK1(1)   <---------AtLEC2 <---------ANAC46          <-----------GT1   <------ZmHOX2a(1)   ttctaactgattagatatcactattaatgataatgcatgatcatcaatatttcgtagcttgattcatattttcatatatactacttacttaagcaggaag  21795800                               --------->ANAC46                         <------MYB46(1)                                                         ----                         <------MYB83                                                        --------                         <---------ANAC46                                                 --------->ANAC58                    <---------ANAC58            ------>MYB46(1)                           --------->ANAC58       <---------LBD16  --------->MYB46(2)      ------>MYB83                           <------ZmHOX2a(2)     <---------ANAC46   --------->MYB59      --------->HSFC1(2)                       <---------ARR11(3)     <---------ANAC58  <---------MYB55(1)    <---------HSFC1(2)<---------ANAC58       --------->ARR11(3)     <---------ANAC58 <---------MYB52(1)     <---------HSFB2a(1)          <---------LBD16 <---------ANAC55(2)  <---------YAB1    <---------ANAC58         --------->HSFB2a(1)         <---------LBD16  --------->ANAC55(2) ---------ICU4      <---------ANAC46       <---------ARR14(2)  <---------ANAC58xxxxxxxxxxxxxxxxxxxxxx   cattatggctggggaacttatttcgtttggtatacaaaacctgtggaacctactgagtcaagaatgcgagctatttcagggagtcgaagatcaagtaact  21795900  Previous    Next  AGI:  At1g58848.1    Description:  ATP binding / protein binding. Identical to Probable disease resistance protein RDL6/RF9 (RF9) [Arabidopsis Thaliana] (GB:Q94HW3;GB:Q94HW8;GB:Q9SLU7;GB:Q9SLU8); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G59218.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G58602.2); similar to disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative [Arabidopsis thaliana] (TAIR:AT1G58807.1); similar to LOV1-like protein [Olimarabidopsis cabulica] (GB:ABW24171.1); similar to LOV1-like protein [Olimarabidopsis pumila] (GB:ABW Range:  from: 21795448    to: 21800715    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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