Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------ZmHOX2a(2)                              <---------ARR14(2)                              <---------ARR11(3)                              <---------GLK1(2)                                --------->ANAC58                              --------->ARR11(3)                               --------->ANAC58                              --------->ARR14(2)<---------ZAT18               --------->DAG2                      <---------MYB59           <---------ZAT14              ---------->DOF2                     --------->ANAC46   --------->KAN4(2)              --------->At4g35610              <---------HSFC1(2)       <---------ICU4              <---------ARR14(2)              <---------HSFB2a(1)     <---------YAB1               --------->GLK1(2)     <---------ZAT18              --------->HSFB2a(1)--------->TOE2(3)                 --------->ARR14(2)    --------->ZAT18   <---------------AGL15      --------->AGP1    --------->ZAT14   <---------GLK1(2)  --------->YAB1 -----GLK1(1) --------->HSFC1(2)------>ZmHOX2a(2)        --------->ZAT6<---------At4g35610   atctcccaaactaagaaatttctacataactagatccttgatcattccagtgaaccaaaacactaagagaatctgcagataaagcaataagcacacttag  21670700                                                                                                    <                                                                                                  ---                                                                                                <----                                                                                               ------                                                    <---------AHL20(2)                        <------                                                   <---------AHL20(2)                   --------->YAB1                                                   <---------AHL20(1)                --------->MYB52(2)                                                   --------->AHL20(2)              <---------MYB52(1)                                             --------->YAB1                  --------->ATHB12 -------                                             <XXXXXXXXXXXXXXXXXXXXMIR866-5P --------->ICU4 --------->YAB1                                            >>>>>>>>>MYB98                  <---------YAB1<---------YAB1              <---------ICU4            <----------DOF2                     <---------ATHB12 --------   agaaacatattcacaaacatttcagatttagcaaaaacatttctttaacataatttttttcttgaaaaatgtagacccatgatttgttagttataatcat  21670800                                                                         <-------TEIL                                                                        --------->CCA1(2)                                                                       <---------ARR14(2)                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                                --------->CCA1(2)                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                               --------->AGP1                                                               <---------AGP1                            --------->ZAT14                    --------->ARR14(3) --------->YAB1             --------->At4g35610                --------->ARR11(3) ---------ATHB12            <---------ZAT14                    <---------ARR14(3) ------>WOX13(1)   --------->WOX13(1)                          <---------ARR11(3) -----YAB1       <---------ATHB12      --------->GLK1(2)  <------ZmHOX2a(2) --->TOE2(3)  <---------AHL20(2)      <---------ARR14(2) --------->AGP1--------->ARR14(2) ---ICU4     --------->AHL20(2)       --------->ARR14(2) --------->ARR11(3) -->YAB1     <---------AHL20(2)       <---------GLK1(2) <---------At4g35610                         - ->ICU4----------->GT1    XXXXXXXXXXXXXXXXXXXX>MIR415   --------->At4g35610           ---------------   caatcaaaaatgtaattaaatcaatcgcagagcagaaacagaacctgtagggtctctcagatcaagatctgaagattcacagaaacaaaacaaaaaaaaa  21670900                                                                                         <------ZmHOX2a(2)                                                                                        --------->ARR11(3)                                                                                        <---------ARR14(2)                     --------->LBD16                                                    --------->GLK1(2)                    <---------HSFB2a(2)                                                 <---------ARR11(3)                <---------GLK1(2)                                                       --------->ARR14(2)               --------->At4g35610                                                      <---------AGP1               <---------At4g35610                                                     <------ZmHOX2a(1)     <---------ARR14(2)    --------->DAG2                                      <------ZmHOX2a(1)     <---------GLK1(2)    --------->DAG2                                       ==================HOX2a_HOX2a     --------->ARR14(2)  ---------->DOF2                                --------->MYB52(1)------>ZmHOX2a(2) -------->MYB52(1)  --------->HSFB2a(2)                           ----------->GT1  ---------->DOF2 --------->ANAC81--------->GLK1(2)                              ---------->DOF2=================HOX2a_HOX2a   aaaaacagatttgtttcagcttctgggaaaagggaacaatgagacagacactgaagataacaatgcgaaagaaaaaacagaggagaaaaggatctgggta  21671000                                                             <---------AHL20(2)                                                            --------->YAB1                                                         --------->YAB1                                               <------ZmHOX2a(1)                                            <---------HSFB2a(2)                   <---------ARR14(2)                                            <---------LBD16<---------YAB1         --------->ARR14(2)<                      <---------KAN4(2)     --------->HSFB2a(2)   --------->YAB1  <---------GLK1(2) -                ---------->DOF2     --------->ANAC58    <---------YAB1     --------->MYB59        <--         <---------YAB1             --------->ANAC58 <---------YAB1     <----------DOF2  ----------->GT1   aactacaaattgtgatggtaaaggaataaacttttgtcgagcaattcgaggaaatttgattataaaaatcaaaactttaggtcggatttttgagtaaatt  21671100                                                                                      <---------LBD16                                                                                   <<<<<<<<<SARD1                                                                               >>>>>>>>>E2Fc                                                                      --------->CCA1(2)                                                              --------->At5g28300  <<<<<<<<<CBP60g            ===========================HOX2a_HOX2a           ----------->GT1   >>>>>>>>>E2Fd            <------ZmHOX2a(1)                              <---------TOE1(2)  --------->LBD16          *TSS                                          <---------ANAC58     --------->ANAC58        ===============================HOX2a_HOX2a      <---------ANAC58    <---------LBD16        <------ZmHOX2a(1)                <---------ANAC58  --------->SPL7<-----------GT1      --------->ANAC58                   <---------ANAC46 <---------SPL1(1) --------->MYB46(3)      --------->ANAC58              <---------ZAT2     --------------->AtSPL3--------->ANAC46    <--------P<---------YAB1        --------->ZAT2    <------------------SPL14------>NtERF2 <---------MYB46(3)                 <---------At4g35610<---------------AtSPL3--------->ANAC58 ---------ANAC46                    --------->At4g35610<-------TEIL  <---------ARR11(3) -------->ETT(1)          <----------DOF2<---------ANAC58<---------SPL7 ----------->HVH21 ---------HVH21  ------->TEIL   ------>ZmHOX2a(2)<-----------GT1     --------->ARR11(1)   tgtcgggtaaggaaggatgaatgttcacctttgatccaagctgtcttgttttttcgattcgtacggtaaaagatttgacccgccaaatttcggattattt  21671200                                          <---------YAB1                       ------>ZmHOX2a(1)                  <---------MYB52(1)     --------->ARR11(3)                 ------>MYB46(1)                 <----------DOF2         <---------ARR11(3)          --------->AHL20(2)--------->ANAC58            <-----------GT1--------->ANAC55(2)              <---------YAB1  ------>MYB83      --------->MYB52(2)   --------->TOE2(3)            --------->YAB1<-----------GT1  --------->ANAC58    <---------MYB52(1)   <---------YAB1 --------->YAB1 <---------ATHB12<-----------GT1 --------->ANAC46   gactaagttagttttaagcctttggttatacttaatgggctattatcttaggcccaaatcatatgatcaaattaaaccttcctccaactacgaaaactaa  21671300                                                                           --------->At4g35610                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                     <---------LBD16                                                                     <---------At5g28300                                                                    <-----------GT1                                                               --------->AHL20(1)                                                               <---------AHL20(1)                                                               <---------AHL20(2)                                          --------->ARR11(3)   --------->AHL20(2)                    ------->TEIL          <---------ARR11(3)   <---------ARR11(3)   <----------ID1                <---------TOE2(3)        <---------CCA1(2)    --------->AHL20(2)   --------->DAG2     --------->ATHB12        <-----------GT1   --------->ATHB12--------->ARR11(3)---------->DOF2   tatttcttcatttgtattgatgtatcggttttatcaagtcgatatatcttcatttgatgctaaaatatattcacggcatcttcaaaaggccaaaagatta  21671400                                                                                                    -                                                                                          --------->ATHB12                     <---------MYB52(1)                                   <---------AHL20(2)        -                   <---------ANAC58                                       --------->AHL20(2)        <                   <---------ANAC46         ------->TEIL                  --------->AHL20(1)       <-       --------->ARR14(2)         <---------------AtSPL8                 --------->AHL20(2)        --      ------>ZmHOX2a(1)      ------>ZmHOX2a(1)                           <---------AHL20(2)     -----      <---------CCA1(2)     --------->TOE2(3)                        --------->AHL20(2)   --------->YAB1  ------->TEIL     <---------ANAC58    <---------AtLEC2   <---------------AtSPL8         --------->ICU4   gatgtatcctatcttcaaattccgttttatcctaaaattgtacatggacttgataatgtagtagtactaaatgaattaaattgtatatggaatcatggac  21671500        <---------GLK1(2)  <---------YAB1 -------->ATHB51                                                                --------->DOF5.7(2) ------->ATHB1                   <---------ZAT6                                 <---------MYB52(1) ---------ICU4               ---------->DOF2                                   --------->TOE2(3) --------YAB1            <----------ID1                                        --------->TOE1(3) ------->ICU4         ---------->DOF2               <----------DOF2         --------->ARR11(3) ------->ATHB5       <---------AHL20(2)---------->DOF2     ---------->DOF2  <---------ARR11(3)    ---   cattattgtagattccttcagatttaaagaacaaagtgttagaaagagacacatctttttgtaaagctaaatgaagaatatcgttagcatcacgagtggc  21671600  Previous    Next  AGI:  At1g58350.1    Description:  ZW18. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09980.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09980.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO43398.1); similar to ZW18 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95883.1); similar to hypothetical protein OsI_036338 [Oryza sativa (indica cultivar-group)] (GB:EAY82379.1); contains InterPro domain Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751) Range:  from: 21666581    to: 21671110    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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