Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------MYB52(1)                 --------->MYB46(3)                 <------------AtMYB77                ------>MYB83                ------>MYB46(1)                -------->P               --------->MYB55(1)               --------->MYB52(1)              --------->AtMYB61              --------->MYB46(3)            ------>ZmHOX2a(1)              --------->GLK1(2)       -- -->GAMYB    --------->MYB46(3)         <-----------GT1           ------->GAMYB                    <- ->P      ----------->HVH21            <-----------GT1           --------->MYB46(3)            ------ ----GT1<---------ANAC55(2)        <----------DOF2            --------->MYB46(3)        <------ZmHOX2a(1) -AtSPL8--------->ANAC55(2) --------->AHL20(2)           ----------->GT1<---------ARR11(3)    -------   ccatcaacttatgtgaccaaccgttattgaataaatgctttttatcctctcagcctaagaggtaacaacagcctgatattctagcacttaggacgactgt  21656300          <---------DDF1          <---------RAP2.6(3)          ------>NtERF2          ----------->RAV1(1)         ------->GAMYB         --------->RAP2.3(3)         --------->At1g77200         --------->DREB2C(2)         ----------->HVH21         --------->RAP2.6(2)        --------->DEAR3(2)        --------->MYB46(3)       <---------At4g35610                                                              <---------TOE2(3)       <---------ZAT2                                                                 ---------->DOF2       --------->ZAT2                                                             <---------------AGL15       --------->At4g35610      --------->AHL20(1)                                <--------HAHB4      ------>NtERF2             <---------AHL20(1)                               <---------YAB1     =================RAV       <---------ARR11(3)                        --------->CCA1(2)     --------->DEAR3(1)      =====================================================================MADS_MADS     <-----------RAV1(2)     --------------->AGL15                 ---------->DOF2--------->YAB1 ------->ARR14(2)   ---------->DOF2                               <------ZmHOX2a(1) <---------YAB1 --------ARR14(2) ------->GAMYB --------->ARR11(3)         --------->ICU4--------->ARR14(2) --->At5g28300 --------->MYB52(1)             ---------->DOF2   --------->MYB59  --------->ICU4 ---->GT1--------->DEAR3(1)  <---------------AGL15       ---------->DOF2 <---------ARR14(2) ---------   gaattcgccagccgacataaccgaaagagttcaatatatagtgaagcccaaagttgagttaaagattaggaaagagatttgctattattaaaggtaatgc  21656400                                                  --------->ZAT14       --------->TOE2(2)                                                  <---------ZAT18  ------>ZmHOX2a(1)            ----------->GT1                       <---------ZAT14 --------->TOE1(3)     <---------AHL20(2)                      ---------->DOF2--------->At4g35610 <---------ANAC58  ------->TEIL                       <----------DOF2        <---------At4g35610 <---------ANAC58 ->DOF2--------->AHL20(2)    <---------AHL20(2)   --------->ZAT18 --------->TOE2(3)   gatgtattttaaaatagttaactaaaccaatttttatgtctttcttcaaaagtgaactcttgagctatcctaaacctgtgtgtcgttcttctcacagact  21656500                                        --------->DAG2                                       ---------->DOF2     <---------ZAT18        --------->ANAC58                                                        -  <---------ANAC46          --------->ANAC58                                   ======================  <------MYB83            ---------->DOF2                                      ---------->DOF2    <--  <------MYB46(1)        <---------WRKY38(1)             --------->YAB1============================== --------->MYB111(1)     <---------WRKY45     <---------ALFIN1         <----------DOF2 --------->AHL20(2)   tatttggtggacacacgatttgtttagtcaaagcaaacaaaaaaagtcccacttccctattagaaaatcaattctttgttaaaaagaaattaaaactaat  21656600        --------->REM1(2)       --------->ALFIN1      <-------MYC4      ------->MYC4      ------->MYC2      <-------MYC3      ------->MYC3      <-------MYC2      ------->PIF5      <-------PIF5     <---------ANAC55(2)     <---------ANAC46                                                    *TSS     <--------ABF1                                                     --------->MYB46(3)     --------->O2                                                      <---------ATHB12     <---------O2                                                      ------------>CBF     =================================bZIP_DOF                        ------>MYB83     <---------TGA1a                                                  -------->P     --------->TGA1a                                                  --------->ANAC58    ------>NtERF2                    ----------->TBP                  ------>MYB46(1)   <---------ALFIN1                --------------->AGL15              --------->ANAC58 -------->ANAC46                   --------->YAB1              --------->DAG2                      -- ==============bZIP_DOF            <---------------AGL15      ---------->DOF2           <---------AHL20(1) ---------GT1                     <-----------------AGL3     ---------->DOF2            --------->AHL20(1) ==============bZIP_DOF    <----------DOF2               ------>ZmHOX2a(1)          <---------AHL20(2)   tttcgccacgtgtagaaacgatatcgcttctttacaactataaatagtcagcctttctcctccaaaaggcccaaccaattccatattaaaaatattagtt  21656700               --------->ATHB12                                                    --------->ZAT6              <---------YAB1                                                     <-----------GT1            --------->YAB1                                                   <----------DOF2         <----------DOF2                                              <----------DOF2        --------     <---------ARR14(2)                           ---------->DOF2 ---------->ID1<---------CCA1(2)     --------->ARR14(2) --------->AHL20(2)---------->DOF2     <----------DOF2------>ZmHOX2a(1) ---->ZmHOX2a(1)     <---------AtLEC2 ------>NtERF2   --------->ARR11(3)  ---------->ID1  --------->ANAC46   cctctcggttccttttatcatttgcataaaatcgttttgcctccaaaagactaaaagctctagactttgtctctttgtccttttatctctactcccaaca  21656800                                                                <---------ARR11(3)                                                           ------>ZmHOX2a(1)                   --------->YAB1                         --------->TOE2(3)      <-----------GT1                                <---------At4g35610              --------->ARR14(2)     <---------ZAT18                               --------->REM1(1)                  <---------ARR11(1)     --------->ZAT14  --------->YAB1             <----------DOF2--------->ARR11(3)   <---------CCA1(2)     <---------ZAT14--------->GLK1(2)          <---------At4g35610       <----------ID1          ---- --->RAV1(1)------>ZmHOX2a(1)                  --------->At4g35610     ---------->DOF2<---------ARR11(3)   aaaccagtttactcctcttaagaatcatgtgtaattcaaaaccatcttctgcttcatcttccttattatcttgtaaagacaaaacccatatctcaaaact  21656900                                                                                                 <---                                                                                           --------->ATHB51                                                                                           <---------ICU4                                                                                           <---------AHL20(2)                         <---------ICU4                   --------->TOE2(3)                --------->AHL20(2)                        --------->ICU4         <---------GLK1(2)                          --------->AHL20(2)                      <---------ICU4         <---------YAB1                               <---------AHL20(1)                     ------>ZmHOX2a(1)   <---------ARR14(2)                               <---------AHL20(2)      ----------->HVH21 <---------YAB1   --------->ARR14(2)   ---------->DOF2       ----------->GT1   --------->TOE1(2) <---------YAB1   --------->LBD16     --------->TOE1(3)     <---------HSFB2a(2)   --------->TOE2(2)--------->TOE2(3)<---------LBD16    <---------ARR11(3)      --------->HSFB2a(2) ----->ANAC46 <---------GLK1(2)     <---------LBD16  --------->HSFB2a(2)       <---------LBD16<------   cgaaacctgtgatacagataatcctcattattctgaattcagggatactgattctctagaccttaaaagatggccaagttttctggaggtaaattatttc  21657000                                                    -------->HAHB4                                                    <--------ATHB1             --------->TOE2(3)                      <---------ICU4            --------->ANAC55(1)                    <---------YAB1            --------->ANAC46                       --------->ICU4            --------->ANAC58                       <---------ATHB51            --------->ANAC55(2)                  --------->YAB1                     --------------->AtSPL8        ------>ZmHOX2a(1)                     --------->YAB1       --------->ARR11(3)     <-----------GT1    ---------->ID1  --------->CCA1(2)          <---------ARR11(3) <---------SPL7 -------DOF2<---------ANAC55(2)        --------->ARR11(1)    --------->GLK1(2)      <---------------AtSPL8 -----GT1   --------->ANAC58 <-----------GT1 ------->TEIL   <---------GLK1(2)       <---------------AtSPL3   tttttttttcctatacgtaaatgtttgtttttttctacatagatatgaacataataattcaagaatctagttcttgacaaaactagattgtacgaactat  21657100                                                                                         <------MYB46(1)                                                                                         <------MYB83                                                                                        --------->MYB55(2)                                                                                        <---------MYB46(3)                                                                                        --------->MYB46(2)                                                                                        <---------DEAR3(1)                                                                                        --------->MYB111(2)                                                                                        <---------AtMYB61                                                                                       <--------P                                           --------->ARR14(2)            <---------ARR11(3)                                      --------->MYB52(1)                 --------->ARR11(3)      <---                                      ----------->RAV1(1)            <---------MYB59   <---------MYB55(1)                       --------->AHL20(2)  <---------ARR14(2) --------->AHL20(2)      <---------MYB52(1)            <-------TEIL <---------------AGL15                <---------AHL20(2)   <---------LBD16        <---------ARR14(2) <---------AHL20(2)             --------->AHL20(2)     --------->PCF5  <---        --------->ARR14(2) --------->AHL20(2)         ------>ZmHOX2a(1) <---------CCA1(2)----------->GT1 ---------->DOF2  <-------TEIL  ----------->GT1       <----------DOF2--------->TOE2(3)<-------GAMYB   accaaaagcatatatacatatacatatatataaatagaaacaacagtttcgcaatcctttttatatatatacctaaatctttggtcccggttggtgattt  21657200  Previous    Next  AGI:  At1g58340.1    Description:  ZF14; transporter. similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT4G23030.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77415.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 21656673    to: 21659104    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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